RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 HMGN5P82970 282 aaKnown RBP10.34□□□□□ -0.75
VCP-206ENST00000480327 GHRHRQ02643 423 aa10.34□□□□□ -0.75
VCP-206ENST00000480327 ARHGAP1Q07960 439 aa10.34□□□□□ -0.75
VCP-206ENST00000480327 PDE4DQ08499 809 aa10.34□□□□□ -0.75
VCP-206ENST00000480327 CUL4AQ13619 759 aa10.34□□□□□ -0.75
VCP-206ENST00000480327 TRIM29Q14134 588 aa10.34□□□□□ -0.75
VCP-206ENST00000480327 FAM47CQ5HY64 1035 aa10.34□□□□□ -0.75
VCP-206ENST00000480327 GDF6Q6KF10 455 aaPredicted RBP10.34□□□□□ -0.75
VCP-206ENST00000480327 NFRKBQ6P4R8 1299 aa10.34□□□□□ -0.75
VCP-206ENST00000480327 TMCO2Q7Z6W1 182 aaPredicted RBP10.34□□□□□ -0.75
VCP-206ENST00000480327 MICALL1Q8N3F8 863 aa10.34□□□□□ -0.75
VCP-206ENST00000480327 SAMD3Q8N6K7 520 aa10.34□□□□□ -0.75
VCP-206ENST00000480327 DNERQ8NFT8 737 aa10.34□□□□□ -0.75
VCP-206ENST00000480327 IL31RAQ8NI17 732 aa10.34□□□□□ -0.75
VCP-206ENST00000480327 NSUN6Q8TEA1 469 aaKnown RBP10.34□□□□□ -0.75
VCP-206ENST00000480327 SCFD2Q8WU76 684 aa10.34□□□□□ -0.75
VCP-206ENST00000480327 C8orf76Q96K31 380 aa10.34□□□□□ -0.75
VCP-206ENST00000480327 PXMP2Q9NR77 195 aa10.34□□□□□ -0.75
VCP-206ENST00000480327 MAP3K20Q9NYL2 800 aaKnown RBP10.34□□□□□ -0.75
VCP-206ENST00000480327 PCDHA6Q9UN73 950 aa10.34□□□□□ -0.75
VCP-206ENST00000480327 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.34□□□□□ -0.75
VCP-206ENST00000480327 PCDHA8Q9Y5H6 950 aa10.34□□□□□ -0.75
VCP-206ENST00000480327 ESYT2A0FGR8 921 aa10.33□□□□□ -0.76
VCP-206ENST00000480327 LCHNA4D1U4 455 aa10.33□□□□□ -0.76
VCP-206ENST00000480327 NKRFO15226 690 aaKnown RBP eCLIP10.33□□□□□ -0.76
VCP-206ENST00000480327 HSP90AA1P07900 732 aaKnown RBP10.33□□□□□ -0.76
VCP-206ENST00000480327 MMP3P08254 477 aa10.33□□□□□ -0.76
VCP-206ENST00000480327 RFC2P35250 354 aa10.33□□□□□ -0.76
VCP-206ENST00000480327 CLK2P49760 499 aaKnown RBP10.33□□□□□ -0.76
VCP-206ENST00000480327 PTPN11Q06124 597 aaPredicted RBP10.33□□□□□ -0.76
VCP-206ENST00000480327 HIC1Q14526 733 aa10.33□□□□□ -0.76
VCP-206ENST00000480327 PGM5Q15124 567 aa10.33□□□□□ -0.76
VCP-206ENST00000480327 LY6KQ17RY6 165 aa10.33□□□□□ -0.76
VCP-206ENST00000480327 TRAF7Q6Q0C0 670 aa10.33□□□□□ -0.76
VCP-206ENST00000480327 HERC6Q8IVU3 1022 aa10.33□□□□□ -0.76
VCP-206ENST00000480327 BLIDQ8IZY5 108 aa10.33□□□□□ -0.76
VCP-206ENST00000480327 REXO1Q8N1G1 1221 aaKnown RBP10.33□□□□□ -0.76
VCP-206ENST00000480327 BICD2Q8TD16 824 aa10.33□□□□□ -0.76
VCP-206ENST00000480327 OXER1Q8TDS5 423 aa10.33□□□□□ -0.76
VCP-206ENST00000480327 AFG1LQ8WV93 481 aa10.33□□□□□ -0.76
VCP-206ENST00000480327 WNT8BQ93098 351 aa10.33□□□□□ -0.76
VCP-206ENST00000480327 SLC9A7Q96T83 725 aa10.33□□□□□ -0.76
VCP-206ENST00000480327 PDCD2LQ9BRP1 358 aa10.33□□□□□ -0.76
VCP-206ENST00000480327 PHF20Q9BVI0 1012 aa10.33□□□□□ -0.76
VCP-206ENST00000480327 ANO3Q9BYT9 981 aa10.33□□□□□ -0.76
VCP-206ENST00000480327 MAF1Q9H063 256 aa10.33□□□□□ -0.76
VCP-206ENST00000480327 PCDHA4Q9UN74 947 aa10.33□□□□□ -0.76
VCP-206ENST00000480327 C5orf42Q9H799 3197 aa10.33□□□□□ -0.76
VCP-206ENST00000480327 B4DLN1 442 aa10.32□□□□□ -0.76
VCP-206ENST00000480327 NR3C2P08235 984 aa10.32□□□□□ -0.76
VCP-206ENST00000480327 GRB10Q13322 594 aa10.32□□□□□ -0.76
VCP-206ENST00000480327 NPY5RQ15761 445 aa10.32□□□□□ -0.76
VCP-206ENST00000480327 SEPT14Q6ZU15 432 aa10.32□□□□□ -0.76
VCP-206ENST00000480327 SESTD1Q86VW0 696 aa10.32□□□□□ -0.76
VCP-206ENST00000480327 PHOSPHO2Q8TCD6 241 aa10.32□□□□□ -0.76
VCP-206ENST00000480327 KHSRPQ92945 711 aaKnown RBP eCLIP10.32□□□□□ -0.761e-6■■□□□ 11.9
VCP-206ENST00000480327 MPHOSPH6Q99547 160 aaKnown RBP10.32□□□□□ -0.76
VCP-206ENST00000480327 GLT8D2Q9H1C3 349 aa10.32□□□□□ -0.76
VCP-206ENST00000480327 RTEL1Q9NZ71 1219 aa10.32□□□□□ -0.76
VCP-206ENST00000480327 BTBD18B2RXH4 712 aa10.31□□□□□ -0.76
VCP-206ENST00000480327 TLL1O43897 1013 aa10.31□□□□□ -0.76
VCP-206ENST00000480327 KPNA6O60684 536 aa10.31□□□□□ -0.76
VCP-206ENST00000480327 NBNO60934 754 aa10.31□□□□□ -0.76
VCP-206ENST00000480327 RGS20O76081 388 aa10.31□□□□□ -0.76
VCP-206ENST00000480327 FOSP01100 380 aaPredicted RBP10.31□□□□□ -0.76
VCP-206ENST00000480327 MMP1P03956 469 aa10.31□□□□□ -0.76
VCP-206ENST00000480327 CCND2P30279 289 aa10.31□□□□□ -0.76
VCP-206ENST00000480327 KRT2P35908 639 aa10.31□□□□□ -0.76
VCP-206ENST00000480327 WDR5P61964 334 aaKnown RBP10.31□□□□□ -0.76
VCP-206ENST00000480327 DEFB103AP81534 67 aa10.31□□□□□ -0.76
VCP-206ENST00000480327 RBL2Q08999 1139 aa10.31□□□□□ -0.76
VCP-206ENST00000480327 NR5A1Q13285 461 aa10.31□□□□□ -0.76
VCP-206ENST00000480327 AP3B2Q13367 1082 aa10.31□□□□□ -0.76
VCP-206ENST00000480327 MBTPS1Q14703 1052 aa10.31□□□□□ -0.76
VCP-206ENST00000480327 STXBP2Q15833 593 aa10.31□□□□□ -0.76
VCP-206ENST00000480327 PTGISQ16647 500 aa10.31□□□□□ -0.76
VCP-206ENST00000480327 TRIM71Q2Q1W2 868 aaKnown RBP10.31□□□□□ -0.76
VCP-206ENST00000480327 DIS3L2Q8IYB7 885 aaKnown RBP10.31□□□□□ -0.76
VCP-206ENST00000480327 DAGLBQ8NCG7 672 aa10.31□□□□□ -0.76
VCP-206ENST00000480327 ARNTL2Q8WYA1 636 aa10.31□□□□□ -0.76
VCP-206ENST00000480327 IWS1Q96ST2 819 aa10.31□□□□□ -0.76
VCP-206ENST00000480327 FTOQ9C0B1 505 aaKnown RBP eCLIP10.31□□□□□ -0.76
VCP-206ENST00000480327 EHMT1Q9H9B1 1298 aa10.31□□□□□ -0.76
VCP-206ENST00000480327 BRMS1Q9HCU9 246 aa10.31□□□□□ -0.76
VCP-206ENST00000480327 DDX41Q9UJV9 622 aaKnown RBP10.31□□□□□ -0.76
VCP-206ENST00000480327 KIF3AQ9Y496 699 aa10.31□□□□□ -0.76
VCP-206ENST00000480327 TRIOO75962 3097 aa10.31□□□□□ -0.76
VCP-206ENST00000480327 RALGAPA2Q2PPJ7 1873 aa10.3□□□□□ -0.76
VCP-206ENST00000480327 FAM205CA6NFA0 338 aa10.3□□□□□ -0.76
VCP-206ENST00000480327 H3BQV1 296 aa10.3□□□□□ -0.76
VCP-206ENST00000480327 HAS3O00219 553 aa10.3□□□□□ -0.76
VCP-206ENST00000480327 SORBS3O60504 671 aa10.3□□□□□ -0.76
VCP-206ENST00000480327 CXCL10P02778 98 aa10.3□□□□□ -0.76
VCP-206ENST00000480327 ACTN1P12814 892 aa10.3□□□□□ -0.76
VCP-206ENST00000480327 ZNF76P36508 570 aa10.3□□□□□ -0.76
VCP-206ENST00000480327 CHMP4BP1P59074 171 aa10.3□□□□□ -0.76
VCP-206ENST00000480327 MRPS9P82933 396 aaKnown RBP10.3□□□□□ -0.76
VCP-206ENST00000480327 MKRN4PQ13434 485 aaPredicted RBP10.3□□□□□ -0.76
VCP-206ENST00000480327 BFSP2Q13515 415 aa10.3□□□□□ -0.76
VCP-206ENST00000480327 GNL2Q13823 731 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms