RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 ALG1Q9BT22 464 aa10.16□□□□□ -0.78
DDX56-211ENST00000479602 VAT1LQ9HCJ6 419 aa10.16□□□□□ -0.78
DDX56-211ENST00000479602 BRMS1Q9HCU9 246 aa10.16□□□□□ -0.78
DDX56-211ENST00000479602 PXMP2Q9NR77 195 aa10.16□□□□□ -0.78
DDX56-211ENST00000479602 NAP1L2Q9ULW6 460 aaPredicted RBP10.16□□□□□ -0.78
DDX56-211ENST00000479602 MTCH2Q9Y6C9 303 aa10.16□□□□□ -0.78
DDX56-211ENST00000479602 PIEZO1Q92508 2521 aa10.15□□□□□ -0.78
DDX56-211ENST00000479602 CYP3A7-CYP3A51PA0A087WV96 503 aa10.15□□□□□ -0.78
DDX56-211ENST00000479602 SMCO2A6NFE2 343 aa10.15□□□□□ -0.78
DDX56-211ENST00000479602 EPOPA6NHQ4 379 aa10.15□□□□□ -0.78
DDX56-211ENST00000479602 TNFRSF10AO00220 468 aa10.15□□□□□ -0.78
DDX56-211ENST00000479602 JAK2O60674 1132 aa10.15□□□□□ -0.78
DDX56-211ENST00000479602 LPXNO60711 386 aa10.15□□□□□ -0.78
DDX56-211ENST00000479602 NR3C2P08235 984 aa10.15□□□□□ -0.78
DDX56-211ENST00000479602 TGFB3P10600 412 aa10.15□□□□□ -0.78
DDX56-211ENST00000479602 GCFC2P16383 781 aaKnown RBP10.15□□□□□ -0.78
DDX56-211ENST00000479602 CYP3A7P24462 503 aa10.15□□□□□ -0.78
DDX56-211ENST00000479602 HOXC8P31273 242 aa10.15□□□□□ -0.78
DDX56-211ENST00000479602 ICAM3P32942 547 aa10.15□□□□□ -0.78
DDX56-211ENST00000479602 USP11P51784 963 aa10.15□□□□□ -0.78
DDX56-211ENST00000479602 MRPS5P82675 430 aaKnown RBP10.15□□□□□ -0.78
DDX56-211ENST00000479602 HIC1Q14526 733 aa10.15□□□□□ -0.78
DDX56-211ENST00000479602 STXBP2Q15833 593 aa10.15□□□□□ -0.78
DDX56-211ENST00000479602 TCTN1Q2MV58 587 aa10.15□□□□□ -0.78
DDX56-211ENST00000479602 BRDTQ58F21 947 aaPredicted RBP10.15□□□□□ -0.78
DDX56-211ENST00000479602 GDF6Q6KF10 455 aaPredicted RBP10.15□□□□□ -0.78
DDX56-211ENST00000479602 KCNV1Q6PIU1 500 aa10.15□□□□□ -0.78
DDX56-211ENST00000479602 KRT25Q7Z3Z0 450 aa10.15□□□□□ -0.78
DDX56-211ENST00000479602 RAB11FIP4Q86YS3 637 aa10.15□□□□□ -0.78
DDX56-211ENST00000479602 PPP1R13LQ8WUF5 828 aa10.15□□□□□ -0.78
DDX56-211ENST00000479602 GPKOWQ92917 476 aaPredicted RBP eCLIP10.15□□□□□ -0.78
DDX56-211ENST00000479602 CDHR1Q96JP9 859 aa10.15□□□□□ -0.78
DDX56-211ENST00000479602 RMDN3Q96TC7 470 aa10.15□□□□□ -0.78
DDX56-211ENST00000479602 SMC3Q9UQE7 1217 aa10.15□□□□□ -0.78
DDX56-211ENST00000479602 SPDYE3A6NKU9 549 aa10.14□□□□□ -0.79
DDX56-211ENST00000479602 NBNO60934 754 aa10.14□□□□□ -0.79
DDX56-211ENST00000479602 PPFIA4O75335 1185 aa10.14□□□□□ -0.79
DDX56-211ENST00000479602 BAIAP3O94812 1187 aa10.14□□□□□ -0.79
DDX56-211ENST00000479602 GH1P01241 217 aa10.14□□□□□ -0.79
DDX56-211ENST00000479602 CA3P07451 260 aa10.14□□□□□ -0.79
DDX56-211ENST00000479602 DDIT3P35638 169 aa10.14□□□□□ -0.79
DDX56-211ENST00000479602 SETQ01105 290 aaPredicted RBP10.14□□□□□ -0.79
DDX56-211ENST00000479602 SP2Q02086 613 aa10.14□□□□□ -0.79
DDX56-211ENST00000479602 TAP1Q03518 808 aa10.14□□□□□ -0.79
DDX56-211ENST00000479602 BFSP2Q13515 415 aa10.14□□□□□ -0.79
DDX56-211ENST00000479602 TRIM29Q14134 588 aa10.14□□□□□ -0.79
DDX56-211ENST00000479602 PTGISQ16647 500 aa10.14□□□□□ -0.79
DDX56-211ENST00000479602 MYSM1Q5VVJ2 828 aa10.14□□□□□ -0.79
DDX56-211ENST00000479602 PPP4R3AQ6IN85 833 aa10.14□□□□□ -0.79
DDX56-211ENST00000479602 DEFB128Q7Z7B8 93 aa10.14□□□□□ -0.79
DDX56-211ENST00000479602 HERC6Q8IVU3 1022 aa10.14□□□□□ -0.79
DDX56-211ENST00000479602 BLIDQ8IZY5 108 aa10.14□□□□□ -0.79
DDX56-211ENST00000479602 CCDC82Q8N4S0 544 aa10.14□□□□□ -0.79
DDX56-211ENST00000479602 FAM184AQ8NB25 1140 aa10.14□□□□□ -0.79
DDX56-211ENST00000479602 CAGE1Q8TC20 777 aa10.14□□□□□ -0.79
DDX56-211ENST00000479602 AFAP1L1Q8TED9 768 aa10.14□□□□□ -0.79
DDX56-211ENST00000479602 GPRASP2Q96D09 838 aa10.14□□□□□ -0.79
DDX56-211ENST00000479602 C8orf76Q96K31 380 aa10.14□□□□□ -0.79
DDX56-211ENST00000479602 SLC9A7Q96T83 725 aa10.14□□□□□ -0.79
DDX56-211ENST00000479602 SENP7Q9BQF6 1050 aa10.14□□□□□ -0.79
DDX56-211ENST00000479602 LARP6Q9BRS8 491 aaKnown RBP10.14□□□□□ -0.79
DDX56-211ENST00000479602 VPS54Q9P1Q0 977 aa10.14□□□□□ -0.79
DDX56-211ENST00000479602 GTF2IRD1Q9UHL9 959 aa10.14□□□□□ -0.79
DDX56-211ENST00000479602 MYH7BA7E2Y1 1941 aa10.13□□□□□ -0.79
DDX56-211ENST00000479602 RFXAPO00287 272 aa10.13□□□□□ -0.79
DDX56-211ENST00000479602 PARNO95453 639 aaKnown RBP10.13□□□□□ -0.79
DDX56-211ENST00000479602 F2P00734 622 aa10.13□□□□□ -0.79
DDX56-211ENST00000479602 CFBP00751 764 aa10.13□□□□□ -0.79
DDX56-211ENST00000479602 SELPP16109 830 aa10.13□□□□□ -0.79
DDX56-211ENST00000479602 GJB2P29033 226 aa10.13□□□□□ -0.79
DDX56-211ENST00000479602 KRT2P35908 639 aa10.13□□□□□ -0.79
DDX56-211ENST00000479602 NLRP5P59047 1200 aa10.13□□□□□ -0.79
DDX56-211ENST00000479602 LAMC2Q13753 1193 aa10.13□□□□□ -0.79
DDX56-211ENST00000479602 MBTPS1Q14703 1052 aa10.13□□□□□ -0.79
DDX56-211ENST00000479602 PGM5Q15124 567 aa10.13□□□□□ -0.79
DDX56-211ENST00000479602 SAFBQ15424 915 aaKnown RBP eCLIP10.13□□□□□ -0.79
DDX56-211ENST00000479602 GNPTABQ3T906 1256 aa10.13□□□□□ -0.79
DDX56-211ENST00000479602 PPP2R2DQ66LE6 453 aa10.13□□□□□ -0.79
DDX56-211ENST00000479602 KRT40Q6A162 431 aa10.13□□□□□ -0.79
DDX56-211ENST00000479602 SEPT14Q6ZU15 432 aa10.13□□□□□ -0.79
DDX56-211ENST00000479602 BRAPQ7Z569 592 aa10.13□□□□□ -0.79
DDX56-211ENST00000479602 RETREG2Q8NC44 543 aa10.13□□□□□ -0.79
DDX56-211ENST00000479602 PPTC7Q8NI37 304 aa10.13□□□□□ -0.79
DDX56-211ENST00000479602 WNT8BQ93098 351 aa10.13□□□□□ -0.79
DDX56-211ENST00000479602 C16orf70Q9BSU1 422 aa10.13□□□□□ -0.79
DDX56-211ENST00000479602 ANO3Q9BYT9 981 aa10.13□□□□□ -0.79
DDX56-211ENST00000479602 THEGQ9P2T0 379 aa10.13□□□□□ -0.79
DDX56-211ENST00000479602 HDAC6Q9UBN7 1215 aa10.13□□□□□ -0.79
DDX56-211ENST00000479602 TBX3O15119 743 aa10.12□□□□□ -0.79
DDX56-211ENST00000479602 TLL1O43897 1013 aa10.12□□□□□ -0.79
DDX56-211ENST00000479602 CKBP12277 381 aa10.12□□□□□ -0.79
DDX56-211ENST00000479602 ACTN1P12814 892 aa10.12□□□□□ -0.79
DDX56-211ENST00000479602 CCND2P30279 289 aa10.12□□□□□ -0.79
DDX56-211ENST00000479602 ARHGAP4P98171 946 aa10.12□□□□□ -0.79
DDX56-211ENST00000479602 CCDC85BQ15834 202 aaPredicted RBP10.12□□□□□ -0.79
DDX56-211ENST00000479602 DGKDQ16760 1214 aa10.12□□□□□ -0.79
DDX56-211ENST00000479602 Q4G0T1 1027 aa10.12□□□□□ -0.79
DDX56-211ENST00000479602 CELF3Q5SZQ8 465 aaKnown RBP10.12□□□□□ -0.79
DDX56-211ENST00000479602 USP17L6PQ6QN14 398 aa10.12□□□□□ -0.79
DDX56-211ENST00000479602 SPRED2Q7Z698 418 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms