RNA–Protein interactions for RNA: ENST00000478459.5

EPHB4-205, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 965 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-205ENST00000478459 MXRA8Q9BRK3 442 aa21.79■■□□□ 1.08
EPHB4-205ENST00000478459 OSBPL7Q9BZF2 842 aa21.79■■□□□ 1.08
EPHB4-205ENST00000478459 ZSWIM6Q9HCJ5 1215 aa21.79■■□□□ 1.08
EPHB4-205ENST00000478459 KCNH7Q9NS40 1196 aa21.79■■□□□ 1.08
EPHB4-205ENST00000478459 PFKMP08237 780 aa21.78■■□□□ 1.08
EPHB4-205ENST00000478459 AKAP17AQ02040 695 aaKnown RBP21.78■■□□□ 1.08
EPHB4-205ENST00000478459 RAB30Q15771 203 aa21.78■■□□□ 1.08
EPHB4-205ENST00000478459 FAM117BQ6P1L5 589 aa21.78■■□□□ 1.08
EPHB4-205ENST00000478459 SENP7Q9BQF6 1050 aa21.78■■□□□ 1.08
EPHB4-205ENST00000478459 SLC28A3Q9HAS3 691 aa21.78■■□□□ 1.08
EPHB4-205ENST00000478459 VPS54Q9P1Q0 977 aa21.78■■□□□ 1.08
EPHB4-205ENST00000478459 PRPF3O43395 683 aaKnown RBP21.77■■□□□ 1.08
EPHB4-205ENST00000478459 RCAN1P53805 252 aa21.77■■□□□ 1.08
EPHB4-205ENST00000478459 IGBP1P78318 339 aa21.77■■□□□ 1.08
EPHB4-205ENST00000478459 DEFB103AP81534 67 aa21.77■■□□□ 1.08
EPHB4-205ENST00000478459 NTRK3Q16288 839 aa21.77■■□□□ 1.08
EPHB4-205ENST00000478459 PPP2R2DQ66LE6 453 aa21.77■■□□□ 1.08
EPHB4-205ENST00000478459 TRAF7Q6Q0C0 670 aa21.77■■□□□ 1.08
EPHB4-205ENST00000478459 SERINC5Q86VE9 423 aa21.77■■□□□ 1.08
EPHB4-205ENST00000478459 GIMAP8Q8ND71 665 aaPredicted RBP21.77■■□□□ 1.08
EPHB4-205ENST00000478459 SEPT1Q8WYJ6 367 aa21.77■■□□□ 1.08
EPHB4-205ENST00000478459 GLG1Q92896 1179 aa21.77■■□□□ 1.08
EPHB4-205ENST00000478459 CDHR1Q96JP9 859 aa21.77■■□□□ 1.08
EPHB4-205ENST00000478459 AGXT2Q9BYV1 514 aa21.77■■□□□ 1.08
EPHB4-205ENST00000478459 ZNF215Q9UL58 517 aaPredicted RBP21.77■■□□□ 1.08
EPHB4-205ENST00000478459 REV3LO60673 3130 aa21.77■■□□□ 1.08
EPHB4-205ENST00000478459 hCG_1984214I3L0E3 225 aa21.76■■□□□ 1.07
EPHB4-205ENST00000478459 CA3P07451 260 aa21.76■■□□□ 1.07
EPHB4-205ENST00000478459 CLK2P49760 499 aaKnown RBP21.76■■□□□ 1.07
EPHB4-205ENST00000478459 ITGB3BPQ13352 177 aaPredicted RBP21.76■■□□□ 1.07
EPHB4-205ENST00000478459 ZNF713Q8N859 430 aaPredicted RBP21.76■■□□□ 1.07
EPHB4-205ENST00000478459 LMBR1Q8WVP7 490 aa21.76■■□□□ 1.07
EPHB4-205ENST00000478459 TMEM265A0A087WTH1 108 aa21.75■■□□□ 1.07
EPHB4-205ENST00000478459 RSPH10B2B2RC85 870 aa21.75■■□□□ 1.07
EPHB4-205ENST00000478459 RFXAPO00287 272 aa21.75■■□□□ 1.07
EPHB4-205ENST00000478459 ARHGEF15O94989 841 aa21.75■■□□□ 1.07
EPHB4-205ENST00000478459 FOSP01100 380 aaPredicted RBP21.75■■□□□ 1.07
EPHB4-205ENST00000478459 CENPBP07199 599 aaPredicted RBP21.75■■□□□ 1.07
EPHB4-205ENST00000478459 RSPH10BP0C881 870 aa21.75■■□□□ 1.07
EPHB4-205ENST00000478459 IGFBP4P22692 258 aa21.75■■□□□ 1.07
EPHB4-205ENST00000478459 KCNJ6P48051 423 aa21.75■■□□□ 1.07
EPHB4-205ENST00000478459 CCDC85BQ15834 202 aaPredicted RBP21.75■■□□□ 1.07
EPHB4-205ENST00000478459 CEP55Q53EZ4 464 aa21.75■■□□□ 1.07
EPHB4-205ENST00000478459 RUFY4Q6ZNE9 571 aa21.75■■□□□ 1.07
EPHB4-205ENST00000478459 SPRED2Q7Z698 418 aa21.75■■□□□ 1.07
EPHB4-205ENST00000478459 AGO4Q9HCK5 861 aaKnown RBP21.75■■□□□ 1.07
EPHB4-205ENST00000478459 C6orf50Q9HD87 102 aa21.75■■□□□ 1.07
EPHB4-205ENST00000478459 JPH1Q9HDC5 661 aaPredicted RBP21.75■■□□□ 1.07
EPHB4-205ENST00000478459 PDRG1Q9NUG6 133 aa21.75■■□□□ 1.07
EPHB4-205ENST00000478459 SLC9A2Q9UBY0 812 aa21.75■■□□□ 1.07
EPHB4-205ENST00000478459 FAM86B1E9PN63 330 aa21.74■■□□□ 1.07
EPHB4-205ENST00000478459 FAM86B2P0C5J1 330 aa21.74■■□□□ 1.07
EPHB4-205ENST00000478459 SREBF1P36956 1147 aa21.74■■□□□ 1.07
EPHB4-205ENST00000478459 WDR5P61964 334 aaKnown RBP21.74■■□□□ 1.07
EPHB4-205ENST00000478459 CNKSR3Q6P9H4 555 aa21.74■■□□□ 1.07
EPHB4-205ENST00000478459 PLA2G4DQ86XP0 818 aa21.74■■□□□ 1.07
EPHB4-205ENST00000478459 HERC6Q8IVU3 1022 aa21.74■■□□□ 1.07
EPHB4-205ENST00000478459 USP38Q8NB14 1042 aa21.74■■□□□ 1.07
EPHB4-205ENST00000478459 AIFM3Q96NN9 605 aa21.74■■□□□ 1.07
EPHB4-205ENST00000478459 PCYT2Q99447 389 aa21.74■■□□□ 1.07
EPHB4-205ENST00000478459 SDF4Q9BRK5 362 aa21.74■■□□□ 1.07
EPHB4-205ENST00000478459 PCDHA11Q9Y5I1 949 aa21.74■■□□□ 1.07
EPHB4-205ENST00000478459 NID2Q14112 1375 aa21.74■■□□□ 1.07
EPHB4-205ENST00000478459 ACTR2P61160 394 aa21.73■■□□□ 1.07
EPHB4-205ENST00000478459 RBL2Q08999 1139 aa21.73■■□□□ 1.07
EPHB4-205ENST00000478459 PPFIA1Q13136 1202 aa21.73■■□□□ 1.07
EPHB4-205ENST00000478459 AP3B2Q13367 1082 aa21.73■■□□□ 1.07
EPHB4-205ENST00000478459 ADGRE1Q14246 886 aa21.73■■□□□ 1.07
EPHB4-205ENST00000478459 REXO1Q8N1G1 1221 aaKnown RBP21.73■■□□□ 1.07
EPHB4-205ENST00000478459 MICALL1Q8N3F8 863 aa21.73■■□□□ 1.07
EPHB4-205ENST00000478459 TRAPPC12Q8WVT3 735 aa21.73■■□□□ 1.07
EPHB4-205ENST00000478459 SLC9A7Q96T83 725 aa21.73■■□□□ 1.07
EPHB4-205ENST00000478459 GAS2L1Q99501 681 aaPredicted RBP21.73■■□□□ 1.07
EPHB4-205ENST00000478459 ZMYND12Q9H0C1 365 aa21.73■■□□□ 1.07
EPHB4-205ENST00000478459 SIP14410 1827 aa21.73■■□□□ 1.07
EPHB4-205ENST00000478459 MICAL3Q7RTP6 2002 aa21.72■■□□□ 1.07
EPHB4-205ENST00000478459 TRANK1O15050 2925 aa21.72■■□□□ 1.07
EPHB4-205ENST00000478459 LCHNA4D1U4 455 aa21.72■■□□□ 1.07
EPHB4-205ENST00000478459 IFNAR1P17181 557 aa21.72■■□□□ 1.07
EPHB4-205ENST00000478459 HOXC8P31273 242 aa21.72■■□□□ 1.07
EPHB4-205ENST00000478459 SSRP1Q08945 709 aaKnown RBP21.72■■□□□ 1.07
EPHB4-205ENST00000478459 GRIK4Q16099 956 aa21.72■■□□□ 1.07
EPHB4-205ENST00000478459 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.72■■□□□ 1.07
EPHB4-205ENST00000478459 TRMT1LQ7Z2T5 733 aaKnown RBP21.72■■□□□ 1.07
EPHB4-205ENST00000478459 FBXL16Q8N461 479 aa21.72■■□□□ 1.07
EPHB4-205ENST00000478459 DBF4BQ8NFT6 615 aa21.72■■□□□ 1.07
EPHB4-205ENST00000478459 ZBED2Q9BTP6 218 aa21.72■■□□□ 1.07
EPHB4-205ENST00000478459 ERAP1Q9NZ08 941 aa21.72■■□□□ 1.07
EPHB4-205ENST00000478459 LOXHD1Q8IVV2 1947 aa21.71■■□□□ 1.07
EPHB4-205ENST00000478459 MEIS1O00470 390 aa21.71■■□□□ 1.07
EPHB4-205ENST00000478459 CPLX1O14810 134 aa21.71■■□□□ 1.07
EPHB4-205ENST00000478459 TLL1O43897 1013 aa21.71■■□□□ 1.07
EPHB4-205ENST00000478459 LGR5O75473 907 aa21.71■■□□□ 1.07
EPHB4-205ENST00000478459 CXCL10P02778 98 aa21.71■■□□□ 1.07
EPHB4-205ENST00000478459 NLRP5P59047 1200 aa21.71■■□□□ 1.07
EPHB4-205ENST00000478459 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.71■■□□□ 1.07
EPHB4-205ENST00000478459 CCDC12Q8WUD4 166 aaPredicted RBP21.71■■□□□ 1.07
EPHB4-205ENST00000478459 RNF26Q9BY78 433 aaPredicted RBP21.71■■□□□ 1.07
EPHB4-205ENST00000478459 GLT8D2Q9H1C3 349 aa21.71■■□□□ 1.07
EPHB4-205ENST00000478459 SMARCAD1Q9H4L7 1026 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms