RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-222	ENST00000478279	ADAM17	P78536	824 aa		12.31	□□□□□ -0.44
APTX-222	ENST00000478279	BTG3	Q14201	252 aa	Predicted RBP	12.31	□□□□□ -0.44
APTX-222	ENST00000478279	IQCA1	Q86XH1	822 aa		12.31	□□□□□ -0.44
APTX-222	ENST00000478279	SAMD3	Q8N6K7	520 aa		12.31	□□□□□ -0.44
APTX-222	ENST00000478279	EFHB	Q8N7U6	833 aa		12.31	□□□□□ -0.44
APTX-222	ENST00000478279	SMRP1	Q8NCR6	262 aa		12.31	□□□□□ -0.44
APTX-222	ENST00000478279	IL31RA	Q8NI17	732 aa		12.31	□□□□□ -0.44
APTX-222	ENST00000478279	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	12.31	□□□□□ -0.44	9e-6	■■□□□ 14.5
APTX-222	ENST00000478279	P2RX5	Q93086	422 aa		12.31	□□□□□ -0.44
APTX-222	ENST00000478279	ZNF689	Q96CS4	500 aa	Predicted RBP	12.31	□□□□□ -0.44
APTX-222	ENST00000478279	BCAS3	Q9H6U6	928 aa		12.31	□□□□□ -0.44
APTX-222	ENST00000478279	CLEC1B	Q9P126	229 aa		12.31	□□□□□ -0.44
APTX-222	ENST00000478279	KMT2E	Q8IZD2	1858 aa		12.31	□□□□□ -0.44
APTX-222	ENST00000478279	SALL3	Q9BXA9	1300 aa		12.31	□□□□□ -0.44
APTX-222	ENST00000478279	CACNA1A	O00555	2505 aa		12.31	□□□□□ -0.44
APTX-222	ENST00000478279	NOP56	O00567	594 aa	Known RBP	12.3	□□□□□ -0.44
APTX-222	ENST00000478279	CHRNA1	P02708	482 aa		12.3	□□□□□ -0.44
APTX-222	ENST00000478279	PARP1	P09874	1014 aa	Known RBP	12.3	□□□□□ -0.44
APTX-222	ENST00000478279	CCND2	P30279	289 aa		12.3	□□□□□ -0.44
APTX-222	ENST00000478279	SIGLEC14	Q08ET2	396 aa		12.3	□□□□□ -0.44
APTX-222	ENST00000478279	COASY	Q13057	564 aa		12.3	□□□□□ -0.44
APTX-222	ENST00000478279	NAALADL2	Q58DX5	795 aa		12.3	□□□□□ -0.44
APTX-222	ENST00000478279	ZNF589	Q86UQ0	364 aa	Predicted RBP	12.3	□□□□□ -0.44
APTX-222	ENST00000478279	TICAM2	Q86XR7	235 aa		12.3	□□□□□ -0.44
APTX-222	ENST00000478279	SPPL3	Q8TCT6	385 aa		12.3	□□□□□ -0.44
APTX-222	ENST00000478279	ZFP91	Q96JP5	570 aa	Predicted RBP	12.3	□□□□□ -0.44
APTX-222	ENST00000478279	EHMT1	Q9H9B1	1298 aa		12.3	□□□□□ -0.44
APTX-222	ENST00000478279	FAM86C1	Q9NVL1	165 aa		12.3	□□□□□ -0.44
APTX-222	ENST00000478279	NEDD4	P46934	1319 aa		12.3	□□□□□ -0.44
APTX-222	ENST00000478279	VPS13A	Q96RL7	3174 aa		12.29	□□□□□ -0.44
APTX-222	ENST00000478279	DGKI	O75912	1065 aa		12.29	□□□□□ -0.44
APTX-222	ENST00000478279	GHR	P10912	638 aa		12.29	□□□□□ -0.44
APTX-222	ENST00000478279	DNAJB1	P25685	340 aa		12.29	□□□□□ -0.44
APTX-222	ENST00000478279	AVPR2	P30518	371 aa		12.29	□□□□□ -0.44
APTX-222	ENST00000478279	HOXA13	P31271	388 aa	Predicted RBP	12.29	□□□□□ -0.44
APTX-222	ENST00000478279	ARHGAP4	P98171	946 aa		12.29	□□□□□ -0.44
APTX-222	ENST00000478279	NEDD9	Q14511	834 aa		12.29	□□□□□ -0.44
APTX-222	ENST00000478279	LPIN1	Q14693	890 aa		12.29	□□□□□ -0.44
APTX-222	ENST00000478279	METTL7B	Q6UX53	244 aa		12.29	□□□□□ -0.44
APTX-222	ENST00000478279	LMBR1	Q8WVP7	490 aa		12.29	□□□□□ -0.44
APTX-222	ENST00000478279	ATOH1	Q92858	354 aa	Predicted RBP	12.29	□□□□□ -0.44
APTX-222	ENST00000478279	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	12.29	□□□□□ -0.44
APTX-222	ENST00000478279	PHF7	Q9BWX1	381 aa	Predicted RBP	12.29	□□□□□ -0.44
APTX-222	ENST00000478279	ZNF215	Q9UL58	517 aa	Predicted RBP	12.29	□□□□□ -0.44
APTX-222	ENST00000478279	USP15	Q9Y4E8	981 aa	Predicted RBP	12.29	□□□□□ -0.44
APTX-222	ENST00000478279	PCDHA1	Q9Y5I3	950 aa		12.29	□□□□□ -0.44
APTX-222	ENST00000478279	TRIM6-TRIM34	B2RNG4	842 aa		12.28	□□□□□ -0.44
APTX-222	ENST00000478279	ZNF213	O14771	459 aa		12.28	□□□□□ -0.44
APTX-222	ENST00000478279	PPP1R11	O60927	126 aa	Predicted RBP	12.28	□□□□□ -0.44
APTX-222	ENST00000478279	KDM4A	O75164	1064 aa		12.28	□□□□□ -0.44
APTX-222	ENST00000478279	ITGB1	P05556	798 aa		12.28	□□□□□ -0.44
APTX-222	ENST00000478279	ICAM3	P32942	547 aa		12.28	□□□□□ -0.44
APTX-222	ENST00000478279	VCP	P55072	806 aa	Known RBP	12.28	□□□□□ -0.44
APTX-222	ENST00000478279	NMI	Q13287	307 aa	Predicted RBP	12.28	□□□□□ -0.44
APTX-222	ENST00000478279	GNPTAB	Q3T906	1256 aa		12.28	□□□□□ -0.44
APTX-222	ENST00000478279	TAF2	Q6P1X5	1199 aa		12.28	□□□□□ -0.44
APTX-222	ENST00000478279	CYFIP1	Q7L576	1253 aa		12.28	□□□□□ -0.44
APTX-222	ENST00000478279	ADGRD2	Q7Z7M1	963 aa		12.28	□□□□□ -0.44
APTX-222	ENST00000478279	TRIM50	Q86XT4	487 aa		12.28	□□□□□ -0.44
APTX-222	ENST00000478279	ENAH	Q8N8S7	591 aa	Predicted RBP	12.28	□□□□□ -0.44
APTX-222	ENST00000478279	POF1B	Q8WVV4	589 aa		12.28	□□□□□ -0.44
APTX-222	ENST00000478279	MTMR8	Q96EF0	704 aa		12.28	□□□□□ -0.44
APTX-222	ENST00000478279	ASIC4	Q96FT7	647 aa		12.28	□□□□□ -0.44
APTX-222	ENST00000478279	GPR20	Q99678	358 aa		12.28	□□□□□ -0.44
APTX-222	ENST00000478279	SUPT16H	Q9Y5B9	1047 aa	Known RBP	12.28	□□□□□ -0.44
APTX-222	ENST00000478279	MRPL42	Q9Y6G3	142 aa	Known RBP	12.28	□□□□□ -0.44
APTX-222	ENST00000478279	NRCAM	Q92823	1304 aa		12.28	□□□□□ -0.44
APTX-222	ENST00000478279	SPATA31C2	B4DYI2	1134 aa		12.27	□□□□□ -0.45
APTX-222	ENST00000478279	GCOM1	H8Y6P7	765 aa	Predicted RBP	12.27	□□□□□ -0.45
APTX-222	ENST00000478279	ZBTB5	O15062	677 aa		12.27	□□□□□ -0.45
APTX-222	ENST00000478279	GLP2R	O95838	553 aa		12.27	□□□□□ -0.45
APTX-222	ENST00000478279	POLR2M	P0CAP2	368 aa		12.27	□□□□□ -0.45
APTX-222	ENST00000478279	NRIP1	P48552	1158 aa		12.27	□□□□□ -0.45
APTX-222	ENST00000478279	NUBP1	P53384	320 aa		12.27	□□□□□ -0.45
APTX-222	ENST00000478279	MGAT3	Q09327	533 aa		12.27	□□□□□ -0.45
APTX-222	ENST00000478279	FBXO47	Q5MNV8	452 aa		12.27	□□□□□ -0.45
APTX-222	ENST00000478279	UTP14C	Q5TAP6	766 aa	Known RBP	12.27	□□□□□ -0.45
APTX-222	ENST00000478279	RSPH3	Q86UC2	560 aa		12.27	□□□□□ -0.45
APTX-222	ENST00000478279	FCHSD1	Q86WN1	690 aa		12.27	□□□□□ -0.45
APTX-222	ENST00000478279	CMTR2	Q8IYT2	770 aa	Known RBP	12.27	□□□□□ -0.45
APTX-222	ENST00000478279	STAG2	Q8N3U4	1231 aa		12.27	□□□□□ -0.45
APTX-222	ENST00000478279	KLHL23	Q8NBE8	558 aa		12.27	□□□□□ -0.45
APTX-222	ENST00000478279	RPGRIP1	Q96KN7	1286 aa		12.27	□□□□□ -0.45
APTX-222	ENST00000478279	INPP4A	Q96PE3	977 aa	Predicted RBP	12.27	□□□□□ -0.45
APTX-222	ENST00000478279	BARX2	Q9UMQ3	279 aa	Predicted RBP	12.27	□□□□□ -0.45
APTX-222	ENST00000478279	PCDHB15	Q9Y5E8	787 aa		12.27	□□□□□ -0.45
APTX-222	ENST00000478279	GVINP1	Q7Z2Y8	2422 aa		12.26	□□□□□ -0.45
APTX-222	ENST00000478279	DOCK5	Q9H7D0	1870 aa		12.26	□□□□□ -0.45
APTX-222	ENST00000478279	KLRF2	D3W0D1	207 aa		12.26	□□□□□ -0.45
APTX-222	ENST00000478279	PROB1	E7EW31	1015 aa		12.26	□□□□□ -0.45
APTX-222	ENST00000478279	STAM2	O75886	525 aa		12.26	□□□□□ -0.45
APTX-222	ENST00000478279	ATF7	P17544	494 aa	Predicted RBP	12.26	□□□□□ -0.45
APTX-222	ENST00000478279	PDE1A	P54750	535 aa		12.26	□□□□□ -0.45
APTX-222	ENST00000478279	MFAP1	P55081	439 aa	Known RBP	12.26	□□□□□ -0.45
APTX-222	ENST00000478279	MRPS9	P82933	396 aa	Known RBP	12.26	□□□□□ -0.45
APTX-222	ENST00000478279	TRAF1	Q13077	416 aa		12.26	□□□□□ -0.45
APTX-222	ENST00000478279	SEMA3F	Q13275	785 aa		12.26	□□□□□ -0.45
APTX-222	ENST00000478279	RUFY4	Q6ZNE9	571 aa		12.26	□□□□□ -0.45
APTX-222	ENST00000478279	RBM23	Q86U06	439 aa	Known RBP	12.26	□□□□□ -0.45
APTX-222	ENST00000478279	CRIPAK	Q8N1N5	446 aa		12.26	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 19 ms