RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 ADAMTS3O15072 1205 aa24.82■■□□□ 1.56
COL9A3-211ENST00000477612 CXCL10P02778 98 aa24.82■■□□□ 1.56
COL9A3-211ENST00000477612 ARP10275 920 aa24.82■■□□□ 1.56
COL9A3-211ENST00000477612 ACTN1P12814 892 aa24.82■■□□□ 1.56
COL9A3-211ENST00000477612 TRIM50Q86XT4 487 aa24.82■■□□□ 1.56
COL9A3-211ENST00000477612 REXO1Q8N1G1 1221 aaKnown RBP24.82■■□□□ 1.56
COL9A3-211ENST00000477612 CCDC148Q8NFR7 591 aa24.82■■□□□ 1.56
COL9A3-211ENST00000477612 ATP6V0A1Q93050 837 aa24.82■■□□□ 1.56
COL9A3-211ENST00000477612 FAM161BQ96MY7 647 aa24.82■■□□□ 1.56
COL9A3-211ENST00000477612 SLC4A7Q9Y6M7 1214 aa24.82■■□□□ 1.56
COL9A3-211ENST00000477612 GNAT1P11488 350 aa24.81■■□□□ 1.56
COL9A3-211ENST00000477612 SP4Q02446 784 aa24.81■■□□□ 1.56
COL9A3-211ENST00000477612 UTP14CQ5TAP6 766 aaKnown RBP24.81■■□□□ 1.56
COL9A3-211ENST00000477612 BICD2Q8TD16 824 aa24.81■■□□□ 1.56
COL9A3-211ENST00000477612 AGO4Q9HCK5 861 aaKnown RBP24.81■■□□□ 1.56
COL9A3-211ENST00000477612 JPH1Q9HDC5 661 aaPredicted RBP24.81■■□□□ 1.56
COL9A3-211ENST00000477612 SLC9A2Q9UBY0 812 aa24.81■■□□□ 1.56
COL9A3-211ENST00000477612 WDR81Q562E7 1941 aa24.8■■□□□ 1.56
COL9A3-211ENST00000477612 MYO9BQ13459 2157 aa24.8■■□□□ 1.56
COL9A3-211ENST00000477612 TREHO43280 583 aa24.8■■□□□ 1.56
COL9A3-211ENST00000477612 LGR5O75473 907 aa24.8■■□□□ 1.56
COL9A3-211ENST00000477612 PBX2P40425 430 aa24.8■■□□□ 1.56
COL9A3-211ENST00000477612 SSRP1Q08945 709 aaKnown RBP24.8■■□□□ 1.56
COL9A3-211ENST00000477612 RAB30Q15771 203 aa24.8■■□□□ 1.56
COL9A3-211ENST00000477612 ZNF618Q5T7W0 954 aa24.8■■□□□ 1.56
COL9A3-211ENST00000477612 TRIM22Q8IYM9 498 aa24.8■■□□□ 1.56
COL9A3-211ENST00000477612 FAM177A1Q8N128 213 aaPredicted RBP24.8■■□□□ 1.56
COL9A3-211ENST00000477612 TIFAQ96CG3 184 aa24.8■■□□□ 1.56
COL9A3-211ENST00000477612 CDX2Q99626 313 aaPredicted RBP24.8■■□□□ 1.56
COL9A3-211ENST00000477612 LARP6Q9BRS8 491 aaKnown RBP24.8■■□□□ 1.56
COL9A3-211ENST00000477612 EMSYQ7Z589 1322 aa24.8■■□□□ 1.56
COL9A3-211ENST00000477612 NRCAMQ92823 1304 aa24.8■■□□□ 1.56
COL9A3-211ENST00000477612 IGLV3-22A0A075B6J6 115 aa24.79■■□□□ 1.56
COL9A3-211ENST00000477612 FAM86B1E9PN63 330 aa24.79■■□□□ 1.56
COL9A3-211ENST00000477612 NBNO60934 754 aa24.79■■□□□ 1.56
COL9A3-211ENST00000477612 BAIAP3O94812 1187 aa24.79■■□□□ 1.56
COL9A3-211ENST00000477612 ATG7O95352 703 aa24.79■■□□□ 1.56
COL9A3-211ENST00000477612 DEXIO95424 95 aa24.79■■□□□ 1.56
COL9A3-211ENST00000477612 FAM86B2P0C5J1 330 aa24.79■■□□□ 1.56
COL9A3-211ENST00000477612 PHOSPHO2Q8TCD6 241 aa24.79■■□□□ 1.56
COL9A3-211ENST00000477612 SMARCAD1Q9H4L7 1026 aa24.79■■□□□ 1.56
COL9A3-211ENST00000477612 SETD4Q9NVD3 440 aa24.79■■□□□ 1.56
COL9A3-211ENST00000477612 ERAP1Q9NZ08 941 aa24.79■■□□□ 1.56
COL9A3-211ENST00000477612 PKD2L1Q9P0L9 805 aa24.79■■□□□ 1.56
COL9A3-211ENST00000477612 VPS54Q9P1Q0 977 aa24.79■■□□□ 1.56
COL9A3-211ENST00000477612 CHD9Q3L8U1 2897 aa24.79■■□□□ 1.56
COL9A3-211ENST00000477612 CPLX1O14810 134 aa24.78■■□□□ 1.56
COL9A3-211ENST00000477612 PPFIA3O75145 1194 aa24.78■■□□□ 1.56
COL9A3-211ENST00000477612 CAND2O75155 1236 aa24.78■■□□□ 1.56
COL9A3-211ENST00000477612 CIITAP33076 1130 aa24.78■■□□□ 1.56
COL9A3-211ENST00000477612 ZNF76P36508 570 aa24.78■■□□□ 1.56
COL9A3-211ENST00000477612 ITGB3BPQ13352 177 aaPredicted RBP24.78■■□□□ 1.56
COL9A3-211ENST00000477612 CPLX2Q6PUV4 134 aaKnown RBP24.78■■□□□ 1.56
COL9A3-211ENST00000477612 PCYT2Q99447 389 aa24.78■■□□□ 1.56
COL9A3-211ENST00000477612 SDF4Q9BRK5 362 aa24.78■■□□□ 1.56
COL9A3-211ENST00000477612 FTOQ9C0B1 505 aaKnown RBP eCLIP24.78■■□□□ 1.56
COL9A3-211ENST00000477612 ZNF576Q9H609 170 aa24.78■■□□□ 1.56
COL9A3-211ENST00000477612 MSRAQ9UJ68 235 aa24.78■■□□□ 1.56
COL9A3-211ENST00000477612 MYH9P35579 1960 aaKnown RBP24.78■■□□□ 1.56
COL9A3-211ENST00000477612 ZBBXA8MT70 800 aa24.77■■□□□ 1.56
COL9A3-211ENST00000477612 MBTPS1Q14703 1052 aa24.77■■□□□ 1.56
COL9A3-211ENST00000477612 LMBR1Q8WVP7 490 aa24.77■■□□□ 1.56
COL9A3-211ENST00000477612 SLC9A7Q96T83 725 aa24.77■■□□□ 1.56
COL9A3-211ENST00000477612 MICAL3Q7RTP6 2002 aa24.76■■□□□ 1.55
COL9A3-211ENST00000477612 DHX15O43143 795 aaKnown RBP24.76■■□□□ 1.55
COL9A3-211ENST00000477612 ATP2A2P16615 1042 aaKnown RBP24.76■■□□□ 1.55
COL9A3-211ENST00000477612 ACTR2P61160 394 aa24.76■■□□□ 1.55
COL9A3-211ENST00000477612 SCRN1Q12765 414 aa24.76■■□□□ 1.55
COL9A3-211ENST00000477612 STK3Q13188 491 aa24.76■■□□□ 1.55
COL9A3-211ENST00000477612 ANKRD1Q15327 319 aa24.76■■□□□ 1.55
COL9A3-211ENST00000477612 CNKSR3Q6P9H4 555 aa24.76■■□□□ 1.55
COL9A3-211ENST00000477612 PLPPR4Q7Z2D5 763 aa24.76■■□□□ 1.55
COL9A3-211ENST00000477612 RPAINQ86UA6 219 aa24.76■■□□□ 1.55
COL9A3-211ENST00000477612 PLA2G4DQ86XP0 818 aa24.76■■□□□ 1.55
COL9A3-211ENST00000477612 TPCN1Q9ULQ1 816 aa24.76■■□□□ 1.55
COL9A3-211ENST00000477612 PCDHA11Q9Y5I1 949 aa24.76■■□□□ 1.55
COL9A3-211ENST00000477612 IGKV6D-21A0A0A0MT36 114 aa24.75■■□□□ 1.55
COL9A3-211ENST00000477612 RSPH10B2B2RC85 870 aa24.75■■□□□ 1.55
COL9A3-211ENST00000477612 EDIL3O43854 480 aa24.75■■□□□ 1.55
COL9A3-211ENST00000477612 PFKFB2O60825 505 aa24.75■■□□□ 1.55
COL9A3-211ENST00000477612 RSPH10BP0C881 870 aa24.75■■□□□ 1.55
COL9A3-211ENST00000477612 THPOP40225 353 aa24.75■■□□□ 1.55
COL9A3-211ENST00000477612 SETQ01105 290 aaPredicted RBP24.75■■□□□ 1.55
COL9A3-211ENST00000477612 RASGRP4Q8TDF6 673 aa24.75■■□□□ 1.55
COL9A3-211ENST00000477612 GLG1Q92896 1179 aa24.75■■□□□ 1.55
COL9A3-211ENST00000477612 YBX2Q9Y2T7 364 aaKnown RBP24.75■■□□□ 1.55
COL9A3-211ENST00000477612 M0R2N6 131 aa24.74■■□□□ 1.55
COL9A3-211ENST00000477612 SEC24BO95487 1268 aa24.74■■□□□ 1.55
COL9A3-211ENST00000477612 USP11P51784 963 aa24.74■■□□□ 1.55
COL9A3-211ENST00000477612 NLRP5P59047 1200 aa24.74■■□□□ 1.55
COL9A3-211ENST00000477612 GRIN2CQ14957 1233 aa24.74■■□□□ 1.55
COL9A3-211ENST00000477612 FAM26DQ5JW98 314 aa24.74■■□□□ 1.55
COL9A3-211ENST00000477612 GALNT17Q6IS24 598 aa24.74■■□□□ 1.55
COL9A3-211ENST00000477612 DAGLBQ8NCG7 672 aa24.74■■□□□ 1.55
COL9A3-211ENST00000477612 SLKQ9H2G2 1235 aaPredicted RBP24.74■■□□□ 1.55
COL9A3-211ENST00000477612 PCDHA4Q9UN74 947 aa24.74■■□□□ 1.55
COL9A3-211ENST00000477612 SIP14410 1827 aa24.74■■□□□ 1.55
COL9A3-211ENST00000477612 ABHD14A-ACY1A0A1B0GW23 586 aa24.73■■□□□ 1.55
COL9A3-211ENST00000477612 MBLAC1A4D2B0 266 aaPredicted RBP24.73■■□□□ 1.55
COL9A3-211ENST00000477612 AK2P54819 239 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms