RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 ITGB5P18084 799 aa13.06□□□□□ -0.32
HDLBP-236ENST00000477477 TCF7P36402 384 aaPredicted RBP13.06□□□□□ -0.32
HDLBP-236ENST00000477477 ARHGAP4P98171 946 aa13.06□□□□□ -0.32
HDLBP-236ENST00000477477 UBE2SQ16763 222 aa13.06□□□□□ -0.32
HDLBP-236ENST00000477477 TMTC3Q6ZXV5 915 aa13.06□□□□□ -0.32
HDLBP-236ENST00000477477 SGMS1Q86VZ5 419 aa13.06□□□□□ -0.32
HDLBP-236ENST00000477477 SP7Q8TDD2 431 aaPredicted RBP13.06□□□□□ -0.32
HDLBP-236ENST00000477477 CDHR1Q96JP9 859 aa13.06□□□□□ -0.32
HDLBP-236ENST00000477477 LRRC2Q9BYS8 371 aa13.06□□□□□ -0.32
HDLBP-236ENST00000477477 OSBPL7Q9BZF2 842 aa13.06□□□□□ -0.32
HDLBP-236ENST00000477477 ANO2Q9NQ90 1003 aa13.06□□□□□ -0.32
HDLBP-236ENST00000477477 SLC12A7Q9Y666 1083 aa13.06□□□□□ -0.32
HDLBP-236ENST00000477477 NRCAMQ92823 1304 aa13.06□□□□□ -0.32
HDLBP-236ENST00000477477 hCG_1642624A0A1W2PR95 340 aa13.05□□□□□ -0.32
HDLBP-236ENST00000477477 FAM26DQ5JW98 314 aa13.05□□□□□ -0.32
HDLBP-236ENST00000477477 MICU3Q86XE3 530 aa13.05□□□□□ -0.32
HDLBP-236ENST00000477477 CCDC82Q8N4S0 544 aa13.05□□□□□ -0.32
HDLBP-236ENST00000477477 FANCBQ8NB91 859 aa13.05□□□□□ -0.32
HDLBP-236ENST00000477477 APBB2Q92870 758 aa13.05□□□□□ -0.32
HDLBP-236ENST00000477477 C17orf80Q9BSJ5 609 aa13.05□□□□□ -0.32
HDLBP-236ENST00000477477 UBIAD1Q9Y5Z9 338 aa13.05□□□□□ -0.32
HDLBP-236ENST00000477477 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.04□□□□□ -0.32
HDLBP-236ENST00000477477 SPDYE3A6NKU9 549 aa13.04□□□□□ -0.32
HDLBP-236ENST00000477477 MTMR1Q13613 665 aa13.04□□□□□ -0.32
HDLBP-236ENST00000477477 TAF2Q6P1X5 1199 aa13.04□□□□□ -0.32
HDLBP-236ENST00000477477 RPAINQ86UA6 219 aa13.04□□□□□ -0.32
HDLBP-236ENST00000477477 FBXO22Q8NEZ5 403 aa13.04□□□□□ -0.32
HDLBP-236ENST00000477477 SEPT1Q8WYJ6 367 aa13.04□□□□□ -0.32
HDLBP-236ENST00000477477 TOP1MTQ969P6 601 aa13.04□□□□□ -0.32
HDLBP-236ENST00000477477 YME1L1Q96TA2 773 aa13.04□□□□□ -0.32
HDLBP-236ENST00000477477 IFIH1Q9BYX4 1025 aaKnown RBP13.04□□□□□ -0.32
HDLBP-236ENST00000477477 PCDHA6Q9UN73 950 aa13.04□□□□□ -0.32
HDLBP-236ENST00000477477 PCDHA8Q9Y5H6 950 aa13.04□□□□□ -0.32
HDLBP-236ENST00000477477 MICAL3Q7RTP6 2002 aa13.03□□□□□ -0.32
HDLBP-236ENST00000477477 COL4A6Q14031 1691 aa13.03□□□□□ -0.32
HDLBP-236ENST00000477477 GSTTP1A0A1W2PQM5 241 aa13.03□□□□□ -0.32
HDLBP-236ENST00000477477 CHRNA1P02708 482 aa13.03□□□□□ -0.32
HDLBP-236ENST00000477477 COL9A1P20849 921 aa13.03□□□□□ -0.32
HDLBP-236ENST00000477477 MARK3P27448 753 aa13.03□□□□□ -0.32
HDLBP-236ENST00000477477 PPFIA1Q13136 1202 aa13.03□□□□□ -0.32
HDLBP-236ENST00000477477 BMP2KLQ5H9B9 411 aa13.03□□□□□ -0.32
HDLBP-236ENST00000477477 APOA5Q6Q788 366 aa13.03□□□□□ -0.32
HDLBP-236ENST00000477477 RUFY4Q6ZNE9 571 aa13.03□□□□□ -0.32
HDLBP-236ENST00000477477 HEATR3Q7Z4Q2 680 aa13.03□□□□□ -0.32
HDLBP-236ENST00000477477 SAMD11Q96NU1 681 aa13.03□□□□□ -0.32
HDLBP-236ENST00000477477 JADE2Q9NQC1 790 aa13.03□□□□□ -0.32
HDLBP-236ENST00000477477 ERAP1Q9NZ08 941 aa13.03□□□□□ -0.32
HDLBP-236ENST00000477477 PKD2L1Q9P0L9 805 aa13.03□□□□□ -0.32
HDLBP-236ENST00000477477 CNTNAP5Q8WYK1 1306 aa13.03□□□□□ -0.32
HDLBP-236ENST00000477477 SIP14410 1827 aa13.02□□□□□ -0.32
HDLBP-236ENST00000477477 DOCK5Q9H7D0 1870 aa13.02□□□□□ -0.32
HDLBP-236ENST00000477477 MBLAC1A4D2B0 266 aaPredicted RBP13.02□□□□□ -0.33
HDLBP-236ENST00000477477 MAFGO15525 162 aa13.02□□□□□ -0.33
HDLBP-236ENST00000477477 UPP2O95045 317 aa13.02□□□□□ -0.33
HDLBP-236ENST00000477477 GHRP10912 638 aa13.02□□□□□ -0.33
HDLBP-236ENST00000477477 MGAT3Q09327 533 aa13.02□□□□□ -0.33
HDLBP-236ENST00000477477 GRIK4Q16099 956 aa13.02□□□□□ -0.33
HDLBP-236ENST00000477477 EPC2Q52LR7 807 aa13.02□□□□□ -0.33
HDLBP-236ENST00000477477 RNF20Q5VTR2 975 aa13.02□□□□□ -0.33
HDLBP-236ENST00000477477 WWC2Q6AWC2 1192 aa13.02□□□□□ -0.33
HDLBP-236ENST00000477477 SYNE3Q6ZMZ3 975 aa13.02□□□□□ -0.33
HDLBP-236ENST00000477477 GLG1Q92896 1179 aa13.02□□□□□ -0.33
HDLBP-236ENST00000477477 SMARCAD1Q9H4L7 1026 aa13.02□□□□□ -0.33
HDLBP-236ENST00000477477 UBE2ZQ9H832 354 aaPredicted RBP13.02□□□□□ -0.33
HDLBP-236ENST00000477477 EHMT1Q9H9B1 1298 aa13.02□□□□□ -0.33
HDLBP-236ENST00000477477 RBM28Q9NW13 759 aaKnown RBP13.02□□□□□ -0.33
HDLBP-236ENST00000477477 TUBE1Q9UJT0 475 aa13.02□□□□□ -0.33
HDLBP-236ENST00000477477 FUT2Q10981 343 aa13.01□□□□□ -0.33
HDLBP-236ENST00000477477 LPIN1Q14693 890 aa13.01□□□□□ -0.33
HDLBP-236ENST00000477477 PTPROQ16827 1216 aa13.01□□□□□ -0.33
HDLBP-236ENST00000477477 TYW1BQ6NUM6 668 aa13.01□□□□□ -0.33
HDLBP-236ENST00000477477 PPP1R18Q6NYC8 613 aa13.01□□□□□ -0.33
HDLBP-236ENST00000477477 RSPH3Q86UC2 560 aa13.01□□□□□ -0.33
HDLBP-236ENST00000477477 SKAP1Q86WV1 359 aa13.01□□□□□ -0.33
HDLBP-236ENST00000477477 TEX2Q8IWB9 1127 aa13.01□□□□□ -0.33
HDLBP-236ENST00000477477 MRPL38Q96DV4 380 aaKnown RBP13.01□□□□□ -0.33
HDLBP-236ENST00000477477 NEK1Q96PY6 1258 aa13.01□□□□□ -0.33
HDLBP-236ENST00000477477 PCYT2Q99447 389 aa13.01□□□□□ -0.33
HDLBP-236ENST00000477477 JPH1Q9HDC5 661 aaPredicted RBP13.01□□□□□ -0.33
HDLBP-236ENST00000477477 TCF20Q9UGU0 1960 aaKnown RBP13.01□□□□□ -0.33
HDLBP-236ENST00000477477 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13□□□□□ -0.33
HDLBP-236ENST00000477477 H3BNC9 293 aa13□□□□□ -0.33
HDLBP-236ENST00000477477 NAPAP54920 295 aa13□□□□□ -0.33
HDLBP-236ENST00000477477 EXOSC10Q01780 885 aaKnown RBP13□□□□□ -0.33
HDLBP-236ENST00000477477 RTN1Q16799 776 aa13□□□□□ -0.33
HDLBP-236ENST00000477477 TSGA10IPQ3SY00 556 aa13□□□□□ -0.33
HDLBP-236ENST00000477477 TIGD5Q53EQ6 642 aa13□□□□□ -0.33
HDLBP-236ENST00000477477 MARCH8Q5T0T0 291 aa13□□□□□ -0.33
HDLBP-236ENST00000477477 DHX32Q7L7V1 743 aaKnown RBP13□□□□□ -0.33
HDLBP-236ENST00000477477 TMEM192Q8IY95 271 aa13□□□□□ -0.33
HDLBP-236ENST00000477477 DNAJB3Q8WWF6 145 aa13□□□□□ -0.33
HDLBP-236ENST00000477477 TCEANC2Q96MN5 208 aa13□□□□□ -0.33
HDLBP-236ENST00000477477 MXRA8Q9BRK3 442 aa13□□□□□ -0.33
HDLBP-236ENST00000477477 RIC8AQ9NPQ8 531 aa13□□□□□ -0.33
HDLBP-236ENST00000477477 KCNH7Q9NS40 1196 aa13□□□□□ -0.33
HDLBP-236ENST00000477477 SLC9A2Q9UBY0 812 aa13□□□□□ -0.33
HDLBP-236ENST00000477477 BRPF3Q9ULD4 1205 aa13□□□□□ -0.33
HDLBP-236ENST00000477477 CDY2AQ9Y6F7 541 aa13□□□□□ -0.33
HDLBP-236ENST00000477477 BRWD1Q9NSI6 2320 aa12.99□□□□□ -0.33
HDLBP-236ENST00000477477 NFASCO94856 1347 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms