RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 P2RX5Q93086 422 aa22.1■■□□□ 1.13
SORT1-203ENST00000471996 MYH7BA7E2Y1 1941 aa22.1■■□□□ 1.13
SORT1-203ENST00000471996 NOP56O00567 594 aaKnown RBP22.09■■□□□ 1.13
SORT1-203ENST00000471996 PARP1P09874 1014 aaKnown RBP22.09■■□□□ 1.13
SORT1-203ENST00000471996 CCND2P30279 289 aa22.09■■□□□ 1.13
SORT1-203ENST00000471996 VCPP55072 806 aaKnown RBP22.09■■□□□ 1.13
SORT1-203ENST00000471996 ZNF589Q86UQ0 364 aaPredicted RBP22.09■■□□□ 1.13
SORT1-203ENST00000471996 IQCA1Q86XH1 822 aa22.09■■□□□ 1.13
SORT1-203ENST00000471996 SAMD3Q8N6K7 520 aa22.09■■□□□ 1.13
SORT1-203ENST00000471996 ZFP91Q96JP5 570 aaPredicted RBP22.09■■□□□ 1.13
SORT1-203ENST00000471996 EHMT1Q9H9B1 1298 aa22.09■■□□□ 1.13
SORT1-203ENST00000471996 DGKIO75912 1065 aa22.08■■□□□ 1.13
SORT1-203ENST00000471996 GHRP10912 638 aa22.08■■□□□ 1.13
SORT1-203ENST00000471996 DNAJB1P25685 340 aa22.08■■□□□ 1.13
SORT1-203ENST00000471996 HOXA13P31271 388 aaPredicted RBP22.08■■□□□ 1.13
SORT1-203ENST00000471996 NT5C2P49902 561 aa22.08■■□□□ 1.13
SORT1-203ENST00000471996 NAALADL2Q58DX5 795 aa22.08■■□□□ 1.13
SORT1-203ENST00000471996 ADGRD2Q7Z7M1 963 aa22.08■■□□□ 1.13
SORT1-203ENST00000471996 SPPL3Q8TCT6 385 aa22.08■■□□□ 1.13
SORT1-203ENST00000471996 LMBR1Q8WVP7 490 aa22.08■■□□□ 1.13
SORT1-203ENST00000471996 ATOH1Q92858 354 aaPredicted RBP22.08■■□□□ 1.13
SORT1-203ENST00000471996 ASIC4Q96FT7 647 aa22.08■■□□□ 1.13
SORT1-203ENST00000471996 ITGB1P05556 798 aa22.07■■□□□ 1.12
SORT1-203ENST00000471996 AVPR2P30518 371 aa22.07■■□□□ 1.12
SORT1-203ENST00000471996 ARHGAP4P98171 946 aa22.07■■□□□ 1.12
SORT1-203ENST00000471996 METTL7BQ6UX53 244 aa22.07■■□□□ 1.12
SORT1-203ENST00000471996 GPR20Q99678 358 aa22.07■■□□□ 1.12
SORT1-203ENST00000471996 PHF7Q9BWX1 381 aaPredicted RBP22.07■■□□□ 1.12
SORT1-203ENST00000471996 ZNF215Q9UL58 517 aaPredicted RBP22.07■■□□□ 1.12
SORT1-203ENST00000471996 USP15Q9Y4E8 981 aaPredicted RBP22.07■■□□□ 1.12
SORT1-203ENST00000471996 MRPL42Q9Y6G3 142 aaKnown RBP22.07■■□□□ 1.12
SORT1-203ENST00000471996 PPP1R11O60927 126 aaPredicted RBP22.06■■□□□ 1.12
SORT1-203ENST00000471996 KDM4AO75164 1064 aa22.06■■□□□ 1.12
SORT1-203ENST00000471996 NEDD9Q14511 834 aa22.06■■□□□ 1.12
SORT1-203ENST00000471996 LPIN1Q14693 890 aa22.06■■□□□ 1.12
SORT1-203ENST00000471996 TICAM2Q86XR7 235 aa22.06■■□□□ 1.12
SORT1-203ENST00000471996 TRIM50Q86XT4 487 aa22.06■■□□□ 1.12
SORT1-203ENST00000471996 ZSCAN10Q96SZ4 725 aaPredicted RBP22.06■■□□□ 1.12
SORT1-203ENST00000471996 SUPT16HQ9Y5B9 1047 aaKnown RBP22.06■■□□□ 1.12
SORT1-203ENST00000471996 PCDHA1Q9Y5I3 950 aa22.06■■□□□ 1.12
SORT1-203ENST00000471996 ZDBF2Q9HCK1 2354 aa22.06■■□□□ 1.12
SORT1-203ENST00000471996 NRCAMQ92823 1304 aa22.06■■□□□ 1.12
SORT1-203ENST00000471996 TRIM6-TRIM34B2RNG4 842 aa22.05■■□□□ 1.12
SORT1-203ENST00000471996 GLP2RO95838 553 aa22.05■■□□□ 1.12
SORT1-203ENST00000471996 ICAM3P32942 547 aa22.05■■□□□ 1.12
SORT1-203ENST00000471996 NRIP1P48552 1158 aa22.05■■□□□ 1.12
SORT1-203ENST00000471996 MGAT3Q09327 533 aa22.05■■□□□ 1.12
SORT1-203ENST00000471996 NMIQ13287 307 aaPredicted RBP22.05■■□□□ 1.12
SORT1-203ENST00000471996 CYFIP1Q7L576 1253 aa22.05■■□□□ 1.12
SORT1-203ENST00000471996 ENAHQ8N8S7 591 aaPredicted RBP22.05■■□□□ 1.12
SORT1-203ENST00000471996 MTMR8Q96EF0 704 aa22.05■■□□□ 1.12
SORT1-203ENST00000471996 RPGRIP1Q96KN7 1286 aa22.05■■□□□ 1.12
SORT1-203ENST00000471996 BARX2Q9UMQ3 279 aaPredicted RBP22.05■■□□□ 1.12
SORT1-203ENST00000471996 MYO15AQ9UKN7 3530 aa22.05■■□□□ 1.12
SORT1-203ENST00000471996 ZFHX2Q9C0A1 2572 aaPredicted RBP22.05■■□□□ 1.12
SORT1-203ENST00000471996 GCOM1H8Y6P7 765 aaPredicted RBP22.04■■□□□ 1.12
SORT1-203ENST00000471996 ZNF213O14771 459 aa22.04■■□□□ 1.12
SORT1-203ENST00000471996 ZBTB5O15062 677 aa22.04■■□□□ 1.12
SORT1-203ENST00000471996 POLR2MP0CAP2 368 aa22.04■■□□□ 1.12
SORT1-203ENST00000471996 GNPTABQ3T906 1256 aa22.04■■□□□ 1.12
SORT1-203ENST00000471996 TAF2Q6P1X5 1199 aa22.04■■□□□ 1.12
SORT1-203ENST00000471996 RUFY4Q6ZNE9 571 aa22.04■■□□□ 1.12
SORT1-203ENST00000471996 RBM23Q86U06 439 aaKnown RBP22.04■■□□□ 1.12
SORT1-203ENST00000471996 CMTR2Q8IYT2 770 aaKnown RBP22.04■■□□□ 1.12
SORT1-203ENST00000471996 STAG2Q8N3U4 1231 aa22.04■■□□□ 1.12
SORT1-203ENST00000471996 KLHL23Q8NBE8 558 aa22.04■■□□□ 1.12
SORT1-203ENST00000471996 POF1BQ8WVV4 589 aa22.04■■□□□ 1.12
SORT1-203ENST00000471996 KMT2EQ8IZD2 1858 aa22.04■■□□□ 1.12
SORT1-203ENST00000471996 SPATA31C2B4DYI2 1134 aa22.03■■□□□ 1.12
SORT1-203ENST00000471996 PROB1E7EW31 1015 aa22.03■■□□□ 1.12
SORT1-203ENST00000471996 NUBP1P53384 320 aa22.03■■□□□ 1.12
SORT1-203ENST00000471996 FBXO47Q5MNV8 452 aa22.03■■□□□ 1.12
SORT1-203ENST00000471996 UTP14CQ5TAP6 766 aaKnown RBP22.03■■□□□ 1.12
SORT1-203ENST00000471996 FCHSD1Q86WN1 690 aa22.03■■□□□ 1.12
SORT1-203ENST00000471996 CRIPAKQ8N1N5 446 aa22.03■■□□□ 1.12
SORT1-203ENST00000471996 INPP4AQ96PE3 977 aaPredicted RBP22.03■■□□□ 1.12
SORT1-203ENST00000471996 PCDHB15Q9Y5E8 787 aa22.03■■□□□ 1.12
SORT1-203ENST00000471996 CACNA1HO95180 2353 aa22.02■■□□□ 1.12
SORT1-203ENST00000471996 STAM2O75886 525 aa22.02■■□□□ 1.12
SORT1-203ENST00000471996 ATF7P17544 494 aaPredicted RBP22.02■■□□□ 1.12
SORT1-203ENST00000471996 MRPS9P82933 396 aaKnown RBP22.02■■□□□ 1.12
SORT1-203ENST00000471996 SEMA3FQ13275 785 aa22.02■■□□□ 1.12
SORT1-203ENST00000471996 RSPH3Q86UC2 560 aa22.02■■□□□ 1.12
SORT1-203ENST00000471996 LINC01599Q8WXQ3 324 aa22.02■■□□□ 1.12
SORT1-203ENST00000471996 SUSD6Q92537 303 aa22.02■■□□□ 1.12
SORT1-203ENST00000471996 ZSWIM5Q9P217 1185 aa22.02■■□□□ 1.12
SORT1-203ENST00000471996 TELO2Q9Y4R8 837 aa22.02■■□□□ 1.12
SORT1-203ENST00000471996 B4E1Z4 1266 aa22.01■■□□□ 1.11
SORT1-203ENST00000471996 KLRF2D3W0D1 207 aa22.01■■□□□ 1.11
SORT1-203ENST00000471996 H0Y858 1186 aa22.01■■□□□ 1.11
SORT1-203ENST00000471996 PTPN21Q16825 1174 aa22.01■■□□□ 1.11
SORT1-203ENST00000471996 TSHZ1Q6ZSZ6 1077 aa22.01■■□□□ 1.11
SORT1-203ENST00000471996 TLR9Q9NR96 1032 aa22.01■■□□□ 1.11
SORT1-203ENST00000471996 FIBPO43427 364 aa22■■□□□ 1.11
SORT1-203ENST00000471996 PDE1AP54750 535 aa22■■□□□ 1.11
SORT1-203ENST00000471996 RTN4RL1Q86UN2 441 aaPredicted RBP22■■□□□ 1.11
SORT1-203ENST00000471996 NPAS4Q8IUM7 802 aa22■■□□□ 1.11
SORT1-203ENST00000471996 TLE6Q9H808 572 aa22■■□□□ 1.11
SORT1-203ENST00000471996 PCDHGC5Q9Y5F6 944 aa22■■□□□ 1.11
SORT1-203ENST00000471996 TTC3P53804 2025 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms