RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 SAMD7Q7Z3H4 446 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 APOBEC3FQ8IUX4 373 aaKnown RBP6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 FAM9CQ8IZT9 166 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 RIBC1Q8N443 379 aaPredicted RBP6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 DEPTORQ8TB45 409 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 NT5C1BQ96P26 610 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 USP42Q9H9J4 1324 aaKnown RBP6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 CLRN2A0PK11 232 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 FRMD3A2A2Y4 597 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 PALM3A6NDB9 673 aaPredicted RBP6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 KCNJ18B7U540 433 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 TCP10L2B9ZVM9 353 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 BACH1O14867 736 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 P4HA2O15460 535 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 TBXAS1P24557 533 aaPredicted RBP6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 CCNE1P24864 410 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 SFNP31947 248 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 MORC3Q14149 939 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 KCNJ12Q14500 433 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 KMT5BQ4FZB7 885 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 HERC4Q5GLZ8 1057 aaPredicted RBP6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 SMIM5Q71RC9 77 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 CCDC197Q8NCU1 140 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 RSAD2Q8WXG1 361 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 SLITRK6Q9H5Y7 841 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 BICC1Q9H694 974 aaKnown RBP6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 KCNK9Q9NPC2 374 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 CYP26B1Q9NR63 512 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 GGA3Q9NZ52 723 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 ASIC3Q9UHC3 531 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 PCDHA4Q9UN74 947 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 ADCY9O60503 1353 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 UBN2Q6ZU65 1347 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 ZNF521Q96K83 1311 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 NEURL1BA8MQ27 555 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 STXBP3O00186 592 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 PGRMC1O00264 195 aaKnown RBP6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 STX1BP61266 288 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 FAM26FQ5R3K3 315 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 ARMCX2Q7L311 632 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 MCPH1Q8NEM0 835 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 DDX56Q9NY93 547 aaKnown RBP6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 IQANK1A0A1B0GTG1 560 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 E7EWF7 191 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 DAPK3O43293 454 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 STAM2O75886 525 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 ATF2P15336 505 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 KRT15P19012 456 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 PAMP19021 973 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 KLHL38Q2WGJ6 581 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 RDM1Q8NG50 284 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 KRT35Q92764 455 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 CTNND2Q9UQB3 1225 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 SRPRBQ9Y5M8 271 aaKnown RBP6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 EPN1Q9Y6I3 576 aaPredicted RBP6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 AGLP35573 1532 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 E7ENQ6 273 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 TBX3O15119 743 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 RPS8P62241 208 aaKnown RBP6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 DMP1Q13316 513 aaPredicted RBP6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 PLCB4Q15147 1175 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 RBBP5Q15291 538 aaKnown RBP6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 MAPK6Q16659 721 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 MIER3Q7Z3K6 550 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 MFN1Q8IWA4 741 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 DEFB123Q8N688 67 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 CAPS2Q9BXY5 557 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 NDUFA13Q9P0J0 144 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 ABCA9Q8IUA7 1624 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 CDC42BPAQ5VT25 1732 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 CFAP69A5D8W1 941 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 NOP56O00567 594 aaKnown RBP6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 PTGS1P23219 599 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 MCM7P33993 719 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 GMPSP49915 693 aaPredicted RBP6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 SKIDA1Q1XH10 827 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 SYCP2LQ5T4T6 812 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 CCDC105Q8IYK2 499 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 SCG3Q8WXD2 468 aaKnown RBP6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 ARHGEF1Q92888 912 aaKnown RBP6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 INTUQ9ULD6 942 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 ZNRF3Q9ULT6 936 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 DIP2AQ14689 1571 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 GAS7O60861 476 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 AOC2O75106 756 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 SLC1A1P43005 524 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 NSFP46459 744 aaKnown RBP6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 PURAQ00577 322 aaKnown RBP6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 ZKSCAN8Q15776 578 aaPredicted RBP6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 ADRM1Q16186 407 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 LRIG3Q6UXM1 1119 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 SETD3Q86TU7 594 aaPredicted RBP6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 METTL23Q86XA0 190 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 PALM2Q8IXS6 379 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 OLFM3Q96PB7 478 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 SYNPO2Q9UMS6 1093 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 SLC8A2Q9UPR5 921 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 LRRD1A4D1F6 860 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 VWA3AA6NCI4 1184 aa6.63□□□□□ -1.35
CCDC144A-212ENST00000470068 SPECC1L-ADORA2AF8WAN1 911 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms