RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 INHBBP09529 407 aa5.73□□□□□ -1.49
SMC4-208ENST00000467468 C6orf222P0C671 652 aaPredicted RBP5.73□□□□□ -1.49
SMC4-208ENST00000467468 POU3F3P20264 500 aaPredicted RBP5.73□□□□□ -1.49
SMC4-208ENST00000467468 CNGA1P29973 690 aa5.73□□□□□ -1.49
SMC4-208ENST00000467468 STAT5AP42229 794 aa5.73□□□□□ -1.49
SMC4-208ENST00000467468 VMACQ2NL98 169 aa5.73□□□□□ -1.49
SMC4-208ENST00000467468 VWA3BQ502W6 1294 aa5.73□□□□□ -1.49
SMC4-208ENST00000467468 FAM47CQ5HY64 1035 aa5.73□□□□□ -1.49
SMC4-208ENST00000467468 CCDC181Q5TID7 509 aa5.73□□□□□ -1.49
SMC4-208ENST00000467468 LIPIQ6XZB0 460 aa5.73□□□□□ -1.49
SMC4-208ENST00000467468 EP400NLQ6ZTU2 488 aa5.73□□□□□ -1.49
SMC4-208ENST00000467468 LINC00482Q8N8I6 264 aa5.73□□□□□ -1.49
SMC4-208ENST00000467468 PRPF38AQ8NAV1 312 aaKnown RBP5.73□□□□□ -1.49
SMC4-208ENST00000467468 KYQ8NBH2 561 aa5.73□□□□□ -1.49
SMC4-208ENST00000467468 ARRDC4Q8NCT1 418 aa5.73□□□□□ -1.49
SMC4-208ENST00000467468 FBXW5Q969U6 566 aa5.73□□□□□ -1.49
SMC4-208ENST00000467468 NOX5Q96PH1 765 aa5.73□□□□□ -1.49
SMC4-208ENST00000467468 GORASP1Q9BQQ3 440 aa5.73□□□□□ -1.49
SMC4-208ENST00000467468 C11orf84Q9BUA3 381 aaPredicted RBP5.73□□□□□ -1.49
SMC4-208ENST00000467468 IPPKQ9H8X2 491 aa5.73□□□□□ -1.49
SMC4-208ENST00000467468 PARD6AQ9NPB6 346 aa5.73□□□□□ -1.49
SMC4-208ENST00000467468 NDOR1Q9UHB4 597 aa5.73□□□□□ -1.49
SMC4-208ENST00000467468 SFMBT1Q9UHJ3 866 aa5.73□□□□□ -1.49
SMC4-208ENST00000467468 ATP8A1Q9Y2Q0 1164 aa5.73□□□□□ -1.49
SMC4-208ENST00000467468 SLC27A2O14975 620 aa5.72□□□□□ -1.49
SMC4-208ENST00000467468 PDE8AO60658 829 aa5.72□□□□□ -1.49
SMC4-208ENST00000467468 SOX5P35711 763 aa5.72□□□□□ -1.49
SMC4-208ENST00000467468 KCNC1P48547 511 aa5.72□□□□□ -1.49
SMC4-208ENST00000467468 ST5P78524 1137 aa5.72□□□□□ -1.49
SMC4-208ENST00000467468 TEPPQ6URK8 271 aa5.72□□□□□ -1.49
SMC4-208ENST00000467468 RNF180Q86T96 592 aa5.72□□□□□ -1.49
SMC4-208ENST00000467468 FAM26EQ8N5C1 309 aa5.72□□□□□ -1.49
SMC4-208ENST00000467468 CLIC6Q96NY7 704 aa5.72□□□□□ -1.49
SMC4-208ENST00000467468 KCNC2Q96PR1 638 aa5.72□□□□□ -1.49
SMC4-208ENST00000467468 TMEM209Q96SK2 561 aa5.72□□□□□ -1.49
SMC4-208ENST00000467468 HOMER2Q9NSB8 354 aa5.72□□□□□ -1.49
SMC4-208ENST00000467468 INTS7Q9NVH2 962 aaKnown RBP5.72□□□□□ -1.49
SMC4-208ENST00000467468 DSEQ9UL01 958 aa5.72□□□□□ -1.49
SMC4-208ENST00000467468 MAPRE3Q9UPY8 281 aa5.72□□□□□ -1.49
SMC4-208ENST00000467468 GSG1L2A8MUP6 293 aa5.71□□□□□ -1.5
SMC4-208ENST00000467468 WNT9AO14904 365 aa5.71□□□□□ -1.5
SMC4-208ENST00000467468 RAPGEF3O95398 923 aa5.71□□□□□ -1.5
SMC4-208ENST00000467468 THBS2P35442 1172 aa5.71□□□□□ -1.5
SMC4-208ENST00000467468 SARSP49591 514 aaKnown RBP5.71□□□□□ -1.5
SMC4-208ENST00000467468 CDKN1CP49918 316 aaPredicted RBP5.71□□□□□ -1.5
SMC4-208ENST00000467468 ITGA1P56199 1179 aa5.71□□□□□ -1.5
SMC4-208ENST00000467468 TUSC3Q13454 348 aa5.71□□□□□ -1.5
SMC4-208ENST00000467468 SMAD4Q13485 552 aaKnown RBP5.71□□□□□ -1.5
SMC4-208ENST00000467468 CR1LQ2VPA4 569 aa5.71□□□□□ -1.5
SMC4-208ENST00000467468 HABP4Q5JVS0 413 aaKnown RBP5.71□□□□□ -1.5
SMC4-208ENST00000467468 ERICH6BQ5W0A0 696 aa5.71□□□□□ -1.5
SMC4-208ENST00000467468 TTLL10Q6ZVT0 673 aa5.71□□□□□ -1.5
SMC4-208ENST00000467468 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.71□□□□□ -1.5
SMC4-208ENST00000467468 FERMT3Q86UX7 667 aa5.71□□□□□ -1.5
SMC4-208ENST00000467468 ZC3H7AQ8IWR0 971 aaKnown RBP5.71□□□□□ -1.5
SMC4-208ENST00000467468 NLGN4XQ8N0W4 816 aa5.71□□□□□ -1.5
SMC4-208ENST00000467468 CARFQ8N187 725 aa5.71□□□□□ -1.5
SMC4-208ENST00000467468 MAGEB10Q96LZ2 347 aaPredicted RBP5.71□□□□□ -1.5
SMC4-208ENST00000467468 CLUHP3Q96NS8 147 aa5.71□□□□□ -1.5
SMC4-208ENST00000467468 FAM126AQ9BYI3 521 aaPredicted RBP5.71□□□□□ -1.5
SMC4-208ENST00000467468 CATSPERZQ9NTU4 200 aa5.71□□□□□ -1.5
SMC4-208ENST00000467468 CHPF2Q9P2E5 772 aa5.71□□□□□ -1.5
SMC4-208ENST00000467468 PCDHA8Q9Y5H6 950 aa5.71□□□□□ -1.5
SMC4-208ENST00000467468 ARVCFO00192 962 aa5.7□□□□□ -1.5
SMC4-208ENST00000467468 COL6A2P12110 1019 aa5.7□□□□□ -1.5
SMC4-208ENST00000467468 RPL13P26373 211 aaKnown RBP5.7□□□□□ -1.5
SMC4-208ENST00000467468 SLURP1P55000 103 aa5.7□□□□□ -1.5
SMC4-208ENST00000467468 GJA9P57773 515 aa5.7□□□□□ -1.5
SMC4-208ENST00000467468 GPR19Q15760 415 aa5.7□□□□□ -1.5
SMC4-208ENST00000467468 CRY1Q16526 586 aa5.7□□□□□ -1.5
SMC4-208ENST00000467468 TRIM61Q5EBN2 209 aa5.7□□□□□ -1.5
SMC4-208ENST00000467468 VASNQ6EMK4 673 aa5.7□□□□□ -1.5
SMC4-208ENST00000467468 KCTD1Q719H9 257 aa5.7□□□□□ -1.5
SMC4-208ENST00000467468 TP53I13Q8NBR0 393 aaPredicted RBP5.7□□□□□ -1.5
SMC4-208ENST00000467468 ZNF526Q8TF50 670 aaPredicted RBP5.7□□□□□ -1.5
SMC4-208ENST00000467468 CHMP4AQ9BY43 222 aa5.7□□□□□ -1.5
SMC4-208ENST00000467468 KRTAP9-9Q9BYP9 154 aa5.7□□□□□ -1.5
SMC4-208ENST00000467468 KRTAP9-4Q9BYQ2 154 aa5.7□□□□□ -1.5
SMC4-208ENST00000467468 SLC52A2Q9HAB3 445 aa5.7□□□□□ -1.5
SMC4-208ENST00000467468 USP40Q9NVE5 1235 aa5.7□□□□□ -1.5
SMC4-208ENST00000467468 HSPBP1Q9NZL4 362 aa5.7□□□□□ -1.5
SMC4-208ENST00000467468 MAGEC2Q9UBF1 373 aaPredicted RBP5.7□□□□□ -1.5
SMC4-208ENST00000467468 MCM8Q9UJA3 840 aa5.7□□□□□ -1.5
SMC4-208ENST00000467468 NKRFO15226 690 aaKnown RBP eCLIP5.69□□□□□ -1.5
SMC4-208ENST00000467468 CRTAMO95727 393 aa5.69□□□□□ -1.5
SMC4-208ENST00000467468 LRG1P02750 347 aa5.69□□□□□ -1.5
SMC4-208ENST00000467468 EXOSC10Q01780 885 aaKnown RBP5.69□□□□□ -1.5
SMC4-208ENST00000467468 GRIN1Q05586 938 aa5.69□□□□□ -1.5
SMC4-208ENST00000467468 CT47A1Q5JQC4 288 aaPredicted RBP5.69□□□□□ -1.5
SMC4-208ENST00000467468 ODR4Q5SWX8 454 aa5.69□□□□□ -1.5
SMC4-208ENST00000467468 C16orf59Q7L2K0 433 aa5.69□□□□□ -1.5
SMC4-208ENST00000467468 DDX42Q86XP3 938 aaKnown RBP eCLIP5.69□□□□□ -1.5
SMC4-208ENST00000467468 PCDH19Q8TAB3 1148 aa5.69□□□□□ -1.5
SMC4-208ENST00000467468 CEP89Q96ST8 783 aa5.69□□□□□ -1.5
SMC4-208ENST00000467468 SPATA25Q9BR10 227 aa5.69□□□□□ -1.5
SMC4-208ENST00000467468 TARS2Q9BW92 718 aaKnown RBP5.69□□□□□ -1.5
SMC4-208ENST00000467468 PDGFDQ9GZP0 370 aaPredicted RBP5.69□□□□□ -1.5
SMC4-208ENST00000467468 SPATA6Q9NWH7 488 aaPredicted RBP5.69□□□□□ -1.5
SMC4-208ENST00000467468 PCDHA9Q9Y5H5 950 aa5.69□□□□□ -1.5
SMC4-208ENST00000467468 A0A1B0GTL3 188 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms