RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 TYRO3Q06418 890 aa13.58□□□□□ -0.24
VPS16-206ENST00000466415 DHX8Q14562 1220 aaKnown RBP13.58□□□□□ -0.24
VPS16-206ENST00000466415 TTLL4Q14679 1199 aa13.58□□□□□ -0.24
VPS16-206ENST00000466415 GSE1Q14687 1217 aa13.58□□□□□ -0.24
VPS16-206ENST00000466415 STX1AQ16623 288 aa13.58□□□□□ -0.24
VPS16-206ENST00000466415 NAALADL2Q58DX5 795 aa13.58□□□□□ -0.24
VPS16-206ENST00000466415 POTEGQ6S5H5 508 aa13.58□□□□□ -0.24
VPS16-206ENST00000466415 SMAP1Q8IYB5 467 aaPredicted RBP13.58□□□□□ -0.24
VPS16-206ENST00000466415 MSL3Q8N5Y2 521 aaKnown RBP13.58□□□□□ -0.24
VPS16-206ENST00000466415 STAMQ92783 540 aa13.58□□□□□ -0.24
VPS16-206ENST00000466415 ERCC4Q92889 916 aaPredicted RBP13.58□□□□□ -0.24
VPS16-206ENST00000466415 CCDC47Q96A33 483 aaKnown RBP13.58□□□□□ -0.24
VPS16-206ENST00000466415 APBA2Q99767 749 aa13.58□□□□□ -0.24
VPS16-206ENST00000466415 SENP7Q9BQF6 1050 aa13.58□□□□□ -0.24
VPS16-206ENST00000466415 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.58□□□□□ -0.24
VPS16-206ENST00000466415 DNM3Q9UQ16 869 aa13.58□□□□□ -0.24
VPS16-206ENST00000466415 SYNGAP1Q96PV0 1343 aa13.58□□□□□ -0.24
VPS16-206ENST00000466415 THSD7BQ9C0I4 1608 aa13.57□□□□□ -0.24
VPS16-206ENST00000466415 PLXNA1Q9UIW2 1896 aa13.57□□□□□ -0.24
VPS16-206ENST00000466415 SORBS3O60504 671 aa13.57□□□□□ -0.24
VPS16-206ENST00000466415 TBC1D8O95759 1140 aa13.57□□□□□ -0.24
VPS16-206ENST00000466415 MYL1P05976 194 aa13.57□□□□□ -0.24
VPS16-206ENST00000466415 P4HBP07237 508 aaKnown RBP13.57□□□□□ -0.24
VPS16-206ENST00000466415 PSAPP07602 524 aa13.57□□□□□ -0.24
VPS16-206ENST00000466415 TGFB3P10600 412 aa13.57□□□□□ -0.24
VPS16-206ENST00000466415 CYP2B6P20813 491 aa13.57□□□□□ -0.24
VPS16-206ENST00000466415 PSMC4P43686 418 aa13.57□□□□□ -0.24
VPS16-206ENST00000466415 CTTNQ14247 550 aaKnown RBP13.57□□□□□ -0.24
VPS16-206ENST00000466415 MIS18BP1Q6P0N0 1132 aa13.57□□□□□ -0.24
VPS16-206ENST00000466415 B3GNT9Q6UX72 402 aa13.57□□□□□ -0.24
VPS16-206ENST00000466415 CYFIP1Q7L576 1253 aa13.57□□□□□ -0.24
VPS16-206ENST00000466415 SH3RF1Q7Z6J0 888 aa13.57□□□□□ -0.24
VPS16-206ENST00000466415 CATSPER3Q86XQ3 398 aa13.57□□□□□ -0.24
VPS16-206ENST00000466415 TPH2Q8IWU9 490 aa13.57□□□□□ -0.24
VPS16-206ENST00000466415 KCTD17Q8N5Z5 321 aa13.57□□□□□ -0.24
VPS16-206ENST00000466415 BANK1Q8NDB2 785 aa13.57□□□□□ -0.24
VPS16-206ENST00000466415 NPLOC4Q8TAT6 608 aa13.57□□□□□ -0.24
VPS16-206ENST00000466415 SCFD2Q8WU76 684 aa13.57□□□□□ -0.24
VPS16-206ENST00000466415 CCDC43Q96MW1 224 aaKnown RBP13.57□□□□□ -0.24
VPS16-206ENST00000466415 LXNQ9BS40 222 aa13.57□□□□□ -0.24
VPS16-206ENST00000466415 TINF2Q9BSI4 451 aa13.57□□□□□ -0.24
VPS16-206ENST00000466415 MLXIPQ9HAP2 919 aa13.57□□□□□ -0.24
VPS16-206ENST00000466415 ANO10Q9NW15 660 aa13.57□□□□□ -0.24
VPS16-206ENST00000466415 RGL1Q9NZL6 768 aa13.57□□□□□ -0.24
VPS16-206ENST00000466415 GOLGA6L3A6NEY3 463 aa13.56□□□□□ -0.24
VPS16-206ENST00000466415 E9PMD0 336 aa13.56□□□□□ -0.24
VPS16-206ENST00000466415 BIN1O00499 593 aa13.56□□□□□ -0.24
VPS16-206ENST00000466415 DKC1O60832 514 aaKnown RBP eCLIP13.56□□□□□ -0.24
VPS16-206ENST00000466415 TRPA1O75762 1119 aa13.56□□□□□ -0.24
VPS16-206ENST00000466415 GGPS1O95749 300 aa13.56□□□□□ -0.24
VPS16-206ENST00000466415 HOXC6P09630 235 aa13.56□□□□□ -0.24
VPS16-206ENST00000466415 PLA2G4BP0C869 781 aa13.56□□□□□ -0.24
VPS16-206ENST00000466415 ASIC1P78348 528 aa13.56□□□□□ -0.24
VPS16-206ENST00000466415 LACTBP83111 547 aaPredicted RBP13.56□□□□□ -0.24
VPS16-206ENST00000466415 SP3Q02447 781 aa13.56□□□□□ -0.24
VPS16-206ENST00000466415 MCM6Q14566 821 aa13.56□□□□□ -0.24
VPS16-206ENST00000466415 ECM1Q16610 540 aa13.56□□□□□ -0.24
VPS16-206ENST00000466415 MAMDC4Q6UXC1 1216 aa13.56□□□□□ -0.24
VPS16-206ENST00000466415 CFHR5Q9BXR6 569 aa13.56□□□□□ -0.24
VPS16-206ENST00000466415 BLZF1Q9H2G9 400 aa13.56□□□□□ -0.24
VPS16-206ENST00000466415 ZSWIM4Q9H7M6 989 aa13.56□□□□□ -0.24
VPS16-206ENST00000466415 BMP2KQ9NSY1 1161 aaPredicted RBP13.56□□□□□ -0.24
VPS16-206ENST00000466415 BLOC1S4Q9NUP1 217 aa13.56□□□□□ -0.24
VPS16-206ENST00000466415 KBTBD4Q9NVX7 518 aa13.56□□□□□ -0.24
VPS16-206ENST00000466415 RMND1Q9NWS8 449 aa13.56□□□□□ -0.24
VPS16-206ENST00000466415 RNF186Q9NXI6 227 aa13.56□□□□□ -0.24
VPS16-206ENST00000466415 ZHX1Q9UKY1 873 aaPredicted RBP13.56□□□□□ -0.24
VPS16-206ENST00000466415 PCDHA5Q9Y5H7 936 aa13.56□□□□□ -0.24
VPS16-206ENST00000466415 PCDHA10Q9Y5I2 948 aa13.56□□□□□ -0.24
VPS16-206ENST00000466415 NOP56O00567 594 aaKnown RBP13.55□□□□□ -0.24
VPS16-206ENST00000466415 BACH1O14867 736 aa13.55□□□□□ -0.24
VPS16-206ENST00000466415 SLITRK3O94933 977 aa13.55□□□□□ -0.24
VPS16-206ENST00000466415 CCNE2O96020 404 aa13.55□□□□□ -0.24
VPS16-206ENST00000466415 KRT18P05783 430 aaKnown RBP13.55□□□□□ -0.24
VPS16-206ENST00000466415 SPATA31C1P0DKV0 1188 aa13.55□□□□□ -0.24
VPS16-206ENST00000466415 TXNP10599 105 aaKnown RBP13.55□□□□□ -0.24
VPS16-206ENST00000466415 QARSP47897 775 aaKnown RBP13.55□□□□□ -0.24
VPS16-206ENST00000466415 NLRP12P59046 1061 aa13.55□□□□□ -0.24
VPS16-206ENST00000466415 ACTR2P61160 394 aa13.55□□□□□ -0.24
VPS16-206ENST00000466415 MDM2Q00987 491 aaPredicted RBP13.55□□□□□ -0.24
VPS16-206ENST00000466415 DPYDQ12882 1025 aa13.55□□□□□ -0.24
VPS16-206ENST00000466415 CUL4BQ13620 913 aa13.55□□□□□ -0.24
VPS16-206ENST00000466415 LY6KQ17RY6 165 aa13.55□□□□□ -0.24
VPS16-206ENST00000466415 METTL7BQ6UX53 244 aa13.55□□□□□ -0.24
VPS16-206ENST00000466415 KCNK18Q7Z418 384 aa13.55□□□□□ -0.24
VPS16-206ENST00000466415 DHX37Q8IY37 1157 aaKnown RBP13.55□□□□□ -0.24
VPS16-206ENST00000466415 TRIML1Q8N9V2 468 aa13.55□□□□□ -0.24
VPS16-206ENST00000466415 ATP6V0A1Q93050 837 aa13.55□□□□□ -0.24
VPS16-206ENST00000466415 NACC1Q96RE7 527 aa13.55□□□□□ -0.24
VPS16-206ENST00000466415 HSD17B14Q9BPX1 270 aa13.55□□□□□ -0.24
VPS16-206ENST00000466415 ABHD16BQ9H3Z7 469 aa13.55□□□□□ -0.24
VPS16-206ENST00000466415 TUBE1Q9UJT0 475 aa13.55□□□□□ -0.24
VPS16-206ENST00000466415 DDX41Q9UJV9 622 aaKnown RBP13.55□□□□□ -0.24
VPS16-206ENST00000466415 ZNFX1Q9P2E3 1918 aaKnown RBP13.54□□□□□ -0.24
VPS16-206ENST00000466415 FARP2O94887 1054 aaPredicted RBP13.54□□□□□ -0.24
VPS16-206ENST00000466415 ARIH2O95376 493 aa13.54□□□□□ -0.24
VPS16-206ENST00000466415 EYA4O95677 639 aa13.54□□□□□ -0.24
VPS16-206ENST00000466415 RPN1P04843 607 aaKnown RBP13.54□□□□□ -0.24
VPS16-206ENST00000466415 SUPT20HL2P0C7V6 817 aa13.54□□□□□ -0.24
VPS16-206ENST00000466415 CASP1P29466 404 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms