RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 ANGEL2Q5VTE6 544 aaKnown RBP12.88□□□□□ -0.35
RBM39-223ENST00000463004 TAF6LQ9Y6J9 622 aa12.88□□□□□ -0.35
RBM39-223ENST00000463004 H2AFZP0C0S5 128 aa12.88□□□□□ -0.35
RBM39-223ENST00000463004 TCP1P17987 556 aaKnown RBP12.88□□□□□ -0.35
RBM39-223ENST00000463004 SNRPFP62306 86 aaKnown RBP12.88□□□□□ -0.35
RBM39-223ENST00000463004 RBM10P98175 930 aaKnown RBP12.88□□□□□ -0.35
RBM39-223ENST00000463004 H2AFVQ71UI9 128 aa12.88□□□□□ -0.35
RBM39-223ENST00000463004 POTEDQ86YR6 584 aa12.88□□□□□ -0.35
RBM39-223ENST00000463004 IPO4Q8TEX9 1081 aaKnown RBP12.88□□□□□ -0.35
RBM39-223ENST00000463004 PRMT6Q96LA8 375 aaPredicted RBP12.88□□□□□ -0.35
RBM39-223ENST00000463004 TUBE1Q9UJT0 475 aa12.88□□□□□ -0.35
RBM39-223ENST00000463004 ZBTB12Q9Y330 459 aaPredicted RBP12.88□□□□□ -0.35
RBM39-223ENST00000463004 TMEM191BP0C7N4 346 aa12.88□□□□□ -0.35
RBM39-223ENST00000463004 GNAT1P11488 350 aa12.88□□□□□ -0.35
RBM39-223ENST00000463004 RFX1P22670 979 aa12.88□□□□□ -0.35
RBM39-223ENST00000463004 SMC1AQ14683 1233 aaKnown RBP12.88□□□□□ -0.35
RBM39-223ENST00000463004 GJA10Q969M2 543 aa12.88□□□□□ -0.35
RBM39-223ENST00000463004 GGA3Q9NZ52 723 aa12.88□□□□□ -0.35
RBM39-223ENST00000463004 UBXN2AP68543 259 aa12.87□□□□□ -0.35
RBM39-223ENST00000463004 CDC42EP1Q00587 391 aa12.87□□□□□ -0.35
RBM39-223ENST00000463004 TYW1Q9NV66 732 aaKnown RBP12.87□□□□□ -0.35
RBM39-223ENST00000463004 UBE4BO95155 1302 aa12.87□□□□□ -0.35
RBM39-223ENST00000463004 KDM3BQ7LBC6 1761 aa12.87□□□□□ -0.35
RBM39-223ENST00000463004 RPS6KA1Q15418 735 aa12.87□□□□□ -0.35
RBM39-223ENST00000463004 NTRK3Q16288 839 aa12.87□□□□□ -0.35
RBM39-223ENST00000463004 KYAT1Q16773 422 aa12.87□□□□□ -0.35
RBM39-223ENST00000463004 PKNOX2Q96KN3 472 aa12.87□□□□□ -0.35
RBM39-223ENST00000463004 CENPHQ9H3R5 247 aa12.87□□□□□ -0.35
RBM39-223ENST00000463004 SUGCTQ9HAC7 445 aa12.87□□□□□ -0.35
RBM39-223ENST00000463004 TMEM260Q9NX78 707 aa12.87□□□□□ -0.35
RBM39-223ENST00000463004 CTTNBP2NLQ9P2B4 639 aa12.87□□□□□ -0.35
RBM39-223ENST00000463004 PPP2R2CQ9Y2T4 447 aa12.87□□□□□ -0.35
RBM39-223ENST00000463004 PCDHA10Q9Y5I2 948 aa12.87□□□□□ -0.35
RBM39-223ENST00000463004 USP54Q70EL1 1684 aa12.87□□□□□ -0.35
RBM39-223ENST00000463004 VIL1P09327 827 aaKnown RBP12.87□□□□□ -0.35
RBM39-223ENST00000463004 CFAP221Q4G0U5 840 aa12.87□□□□□ -0.35
RBM39-223ENST00000463004 NLRC4Q9NPP4 1024 aa12.87□□□□□ -0.35
RBM39-223ENST00000463004 PITPNM2Q9BZ72 1349 aa12.87□□□□□ -0.35
RBM39-223ENST00000463004 PDE6CP51160 858 aa12.86□□□□□ -0.35
RBM39-223ENST00000463004 MTMR2Q13614 643 aa12.86□□□□□ -0.35
RBM39-223ENST00000463004 TTBK2Q6IQ55 1244 aa12.86□□□□□ -0.35
RBM39-223ENST00000463004 PADI6Q6TGC4 694 aa12.86□□□□□ -0.35
RBM39-223ENST00000463004 AKT1S1Q96B36 256 aa12.86□□□□□ -0.35
RBM39-223ENST00000463004 CPVLQ9H3G5 476 aa12.86□□□□□ -0.35
RBM39-223ENST00000463004 TMX1Q9H3N1 280 aa12.86□□□□□ -0.35
RBM39-223ENST00000463004 NDST4Q9H3R1 872 aa12.86□□□□□ -0.35
RBM39-223ENST00000463004 LGALS16A8MUM7 142 aa12.86□□□□□ -0.35
RBM39-223ENST00000463004 ICAM1P05362 532 aa12.86□□□□□ -0.35
RBM39-223ENST00000463004 TYW1BQ6NUM6 668 aa12.86□□□□□ -0.35
RBM39-223ENST00000463004 SMAP1Q8IYB5 467 aaPredicted RBP12.86□□□□□ -0.35
RBM39-223ENST00000463004 ACTN4O43707 911 aaKnown RBP12.86□□□□□ -0.35
RBM39-223ENST00000463004 PTK2Q05397 1052 aa12.86□□□□□ -0.35
RBM39-223ENST00000463004 CUL4BQ13620 913 aa12.86□□□□□ -0.35
RBM39-223ENST00000463004 ADGRA1Q86SQ6 560 aa12.86□□□□□ -0.35
RBM39-223ENST00000463004 LCMT1Q9UIC8 334 aa12.86□□□□□ -0.35
RBM39-223ENST00000463004 A0A1W2PQC6 194 aa12.86□□□□□ -0.35
RBM39-223ENST00000463004 TDP2O95551 362 aa12.86□□□□□ -0.35
RBM39-223ENST00000463004 FGRP09769 529 aa12.86□□□□□ -0.35
RBM39-223ENST00000463004 HMGCS2P54868 508 aa12.86□□□□□ -0.35
RBM39-223ENST00000463004 ADKP55263 362 aaKnown RBP12.86□□□□□ -0.35
RBM39-223ENST00000463004 POLR2FP61218 127 aaKnown RBP12.86□□□□□ -0.35
RBM39-223ENST00000463004 FAM193AP78312 1265 aa12.86□□□□□ -0.35
RBM39-223ENST00000463004 TNFAIP2Q03169 654 aa12.86□□□□□ -0.35
RBM39-223ENST00000463004 ANKRD36BP1Q96IX9 119 aa12.86□□□□□ -0.35
RBM39-223ENST00000463004 MMP19Q99542 508 aa12.86□□□□□ -0.35
RBM39-223ENST00000463004 RNF14Q9UBS8 474 aa12.86□□□□□ -0.35
RBM39-223ENST00000463004 SCN11AQ9UI33 1791 aa12.85□□□□□ -0.35
RBM39-223ENST00000463004 POTEMA6NI47 508 aa12.85□□□□□ -0.35
RBM39-223ENST00000463004 KIAA0754O94854 1291 aa12.85□□□□□ -0.35
RBM39-223ENST00000463004 CALCOCO2Q13137 446 aa12.85□□□□□ -0.35
RBM39-223ENST00000463004 CCDC91Q7Z6B0 441 aa12.85□□□□□ -0.35
RBM39-223ENST00000463004 GRAMD1CQ8IYS0 662 aa12.85□□□□□ -0.35
RBM39-223ENST00000463004 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.85□□□□□ -0.35
RBM39-223ENST00000463004 AMFRQ9UKV5 643 aa12.85□□□□□ -0.35
RBM39-223ENST00000463004 SPEF2Q9C093 1822 aa12.85□□□□□ -0.35
RBM39-223ENST00000463004 CDC25AP30304 524 aa12.85□□□□□ -0.35
RBM39-223ENST00000463004 COASYQ13057 564 aa12.85□□□□□ -0.35
RBM39-223ENST00000463004 MKL1Q969V6 931 aa12.85□□□□□ -0.35
RBM39-223ENST00000463004 PARK7Q99497 189 aaKnown RBP12.85□□□□□ -0.35
RBM39-223ENST00000463004 EIF2AK1Q9BQI3 630 aaKnown RBP12.85□□□□□ -0.35
RBM39-223ENST00000463004 TBC1D12O60347 775 aa12.85□□□□□ -0.35
RBM39-223ENST00000463004 RHOBTB3O94955 611 aa12.85□□□□□ -0.35
RBM39-223ENST00000463004 CETPP11597 493 aa12.85□□□□□ -0.35
RBM39-223ENST00000463004 AP3M2P53677 418 aa12.85□□□□□ -0.35
RBM39-223ENST00000463004 CTTNQ14247 550 aaKnown RBP12.85□□□□□ -0.35
RBM39-223ENST00000463004 APOBEC3HQ6NTF7 200 aaKnown RBP12.85□□□□□ -0.35
RBM39-223ENST00000463004 PEX26Q7Z412 305 aa12.85□□□□□ -0.35
RBM39-223ENST00000463004 GPC2Q8N158 579 aa12.85□□□□□ -0.35
RBM39-223ENST00000463004 TTC39CQ8N584 583 aa12.85□□□□□ -0.35
RBM39-223ENST00000463004 OTUD5Q96G74 571 aa12.85□□□□□ -0.35
RBM39-223ENST00000463004 POLR3CQ9BUI4 534 aaPredicted RBP12.85□□□□□ -0.35
RBM39-223ENST00000463004 KIAA1683Q9H0B3 1180 aa12.85□□□□□ -0.35
RBM39-223ENST00000463004 IFT122Q9HBG6 1241 aa12.85□□□□□ -0.35
RBM39-223ENST00000463004 HYOU1Q9Y4L1 999 aa12.85□□□□□ -0.35
RBM39-223ENST00000463004 ZNF233A6NK53 670 aa12.84□□□□□ -0.35
RBM39-223ENST00000463004 K7ERI5 159 aa12.84□□□□□ -0.35
RBM39-223ENST00000463004 HOXD10P28358 340 aa12.84□□□□□ -0.35
RBM39-223ENST00000463004 OAZ1P54368 228 aa12.84□□□□□ -0.35
RBM39-223ENST00000463004 KNOP1Q1ED39 458 aaKnown RBP12.84□□□□□ -0.35
RBM39-223ENST00000463004 ARFGAP2Q8N6H7 521 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms