RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	LTBR	P36941	435 aa		12.89	□□□□□ -0.35
PTPN7-204	ENST00000462815	TCEAL5	Q5H9L2	206 aa		12.89	□□□□□ -0.35
PTPN7-204	ENST00000462815	MARCH8	Q5T0T0	291 aa		12.89	□□□□□ -0.35
PTPN7-204	ENST00000462815	PTCRA	Q6ISU1	281 aa	Predicted RBP	12.89	□□□□□ -0.35
PTPN7-204	ENST00000462815	TMEM192	Q8IY95	271 aa		12.89	□□□□□ -0.35
PTPN7-204	ENST00000462815	GJD3	Q8N144	294 aa		12.89	□□□□□ -0.35
PTPN7-204	ENST00000462815	CRIPAK	Q8N1N5	446 aa		12.89	□□□□□ -0.35
PTPN7-204	ENST00000462815	LINC01599	Q8WXQ3	324 aa		12.89	□□□□□ -0.35
PTPN7-204	ENST00000462815	APBB2	Q92870	758 aa		12.89	□□□□□ -0.35
PTPN7-204	ENST00000462815	PABPC5	Q96DU9	382 aa	Known RBP	12.89	□□□□□ -0.35
PTPN7-204	ENST00000462815		U3KPZ7	1027 aa	Predicted RBP	12.89	□□□□□ -0.35
PTPN7-204	ENST00000462815	GSTTP1	A0A1W2PQM5	241 aa		12.88	□□□□□ -0.35
PTPN7-204	ENST00000462815	POTEB3	A0JP26	581 aa		12.88	□□□□□ -0.35
PTPN7-204	ENST00000462815	MBLAC1	A4D2B0	266 aa	Predicted RBP	12.88	□□□□□ -0.35
PTPN7-204	ENST00000462815		H3BQ06	376 aa	Predicted RBP	12.88	□□□□□ -0.35
PTPN7-204	ENST00000462815	NOP56	O00567	594 aa	Known RBP	12.88	□□□□□ -0.35
PTPN7-204	ENST00000462815	ITGB5	P18084	799 aa		12.88	□□□□□ -0.35
PTPN7-204	ENST00000462815	TRDN	Q13061	729 aa		12.88	□□□□□ -0.35
PTPN7-204	ENST00000462815	GPM6B	Q13491	265 aa		12.88	□□□□□ -0.35
PTPN7-204	ENST00000462815	CTC1	Q2NKJ3	1217 aa		12.88	□□□□□ -0.35
PTPN7-204	ENST00000462815	TIGD5	Q53EQ6	642 aa		12.88	□□□□□ -0.35
PTPN7-204	ENST00000462815	XRRA1	Q6P2D8	792 aa		12.88	□□□□□ -0.35
PTPN7-204	ENST00000462815	POTEB	Q6S5H4	581 aa		12.88	□□□□□ -0.35
PTPN7-204	ENST00000462815	BANK1	Q8NDB2	785 aa		12.88	□□□□□ -0.35
PTPN7-204	ENST00000462815	NCOA7	Q8NI08	942 aa		12.88	□□□□□ -0.35
PTPN7-204	ENST00000462815	MAP4K1	Q92918	833 aa		12.88	□□□□□ -0.35
PTPN7-204	ENST00000462815	CLP1	Q92989	425 aa	Known RBP	12.88	□□□□□ -0.35
PTPN7-204	ENST00000462815	ZNF689	Q96CS4	500 aa	Predicted RBP	12.88	□□□□□ -0.35
PTPN7-204	ENST00000462815	YME1L1	Q96TA2	773 aa		12.88	□□□□□ -0.35
PTPN7-204	ENST00000462815	MYL10	Q9BUA6	226 aa		12.88	□□□□□ -0.35
PTPN7-204	ENST00000462815	IFIH1	Q9BYX4	1025 aa	Known RBP	12.88	□□□□□ -0.35
PTPN7-204	ENST00000462815	HCN4	Q9Y3Q4	1203 aa		12.88	□□□□□ -0.35
PTPN7-204	ENST00000462815	KIAA1671	Q9BY89	1806 aa		12.88	□□□□□ -0.35
PTPN7-204	ENST00000462815	NRCAM	Q92823	1304 aa		12.88	□□□□□ -0.35
PTPN7-204	ENST00000462815	C19orf67	A6NJJ6	358 aa		12.87	□□□□□ -0.35
PTPN7-204	ENST00000462815	UPP2	O95045	317 aa		12.87	□□□□□ -0.35
PTPN7-204	ENST00000462815	PLEKHA8P1	O95397	391 aa		12.87	□□□□□ -0.35
PTPN7-204	ENST00000462815	GNAT1	P11488	350 aa		12.87	□□□□□ -0.35
PTPN7-204	ENST00000462815	SMARCA1	P28370	1054 aa		12.87	□□□□□ -0.35
PTPN7-204	ENST00000462815	ARHGAP4	P98171	946 aa		12.87	□□□□□ -0.35
PTPN7-204	ENST00000462815	ZP2	Q05996	745 aa		12.87	□□□□□ -0.35
PTPN7-204	ENST00000462815	LPIN1	Q14693	890 aa		12.87	□□□□□ -0.35
PTPN7-204	ENST00000462815	PTPRO	Q16827	1216 aa		12.87	□□□□□ -0.35
PTPN7-204	ENST00000462815	UTP14C	Q5TAP6	766 aa	Known RBP	12.87	□□□□□ -0.35
PTPN7-204	ENST00000462815	ZNF654	Q8IZM8	581 aa		12.87	□□□□□ -0.35
PTPN7-204	ENST00000462815	SRBD1	Q8N5C6	995 aa	Known RBP	12.87	□□□□□ -0.35
PTPN7-204	ENST00000462815	PIBF1	Q8WXW3	757 aa		12.87	□□□□□ -0.35
PTPN7-204	ENST00000462815	NSUN3	Q9H649	340 aa	Known RBP	12.87	□□□□□ -0.35
PTPN7-204	ENST00000462815	ZNF215	Q9UL58	517 aa	Predicted RBP	12.87	□□□□□ -0.35
PTPN7-204	ENST00000462815	USP34	Q70CQ2	3546 aa		12.87	□□□□□ -0.35
PTPN7-204	ENST00000462815	ADGRA3	Q8IWK6	1321 aa		12.87	□□□□□ -0.35
PTPN7-204	ENST00000462815	MUC6	Q6W4X9	2439 aa		12.86	□□□□□ -0.35
PTPN7-204	ENST00000462815	PRR33	A8MZF0	331 aa		12.86	□□□□□ -0.35
PTPN7-204	ENST00000462815	DDAH1	O94760	285 aa		12.86	□□□□□ -0.35
PTPN7-204	ENST00000462815	GHR	P10912	638 aa		12.86	□□□□□ -0.35
PTPN7-204	ENST00000462815	TCF7	P36402	384 aa	Predicted RBP	12.86	□□□□□ -0.35
PTPN7-204	ENST00000462815	CAMK1	Q14012	370 aa		12.86	□□□□□ -0.35
PTPN7-204	ENST00000462815	PUS10	Q3MIT2	529 aa	Known RBP	12.86	□□□□□ -0.35
PTPN7-204	ENST00000462815	CATIP	Q7Z7H3	387 aa		12.86	□□□□□ -0.35
PTPN7-204	ENST00000462815	RALYL	Q86SE5	291 aa	Known RBP	12.86	□□□□□ -0.35
PTPN7-204	ENST00000462815	GPRASP2	Q96D09	838 aa		12.86	□□□□□ -0.35
PTPN7-204	ENST00000462815	PCYT2	Q99447	389 aa		12.86	□□□□□ -0.35
PTPN7-204	ENST00000462815	MTA3	Q9BTC8	594 aa		12.86	□□□□□ -0.35
PTPN7-204	ENST00000462815	UBIAD1	Q9Y5Z9	338 aa		12.86	□□□□□ -0.35
PTPN7-204	ENST00000462815	TTC3	P53804	2025 aa		12.85	□□□□□ -0.35
PTPN7-204	ENST00000462815	ERICH2	A1L162	156 aa		12.85	□□□□□ -0.35
PTPN7-204	ENST00000462815	SH2B2	O14492	632 aa	Predicted RBP	12.85	□□□□□ -0.35
PTPN7-204	ENST00000462815	ENPP3	O14638	875 aa		12.85	□□□□□ -0.35
PTPN7-204	ENST00000462815	GRM6	O15303	877 aa		12.85	□□□□□ -0.35
PTPN7-204	ENST00000462815	BMPR1A	P36894	532 aa		12.85	□□□□□ -0.35
PTPN7-204	ENST00000462815	SP4	Q02446	784 aa		12.85	□□□□□ -0.35
PTPN7-204	ENST00000462815	DLX2	Q07687	328 aa	Predicted RBP	12.85	□□□□□ -0.35
PTPN7-204	ENST00000462815	HYAL1	Q12794	435 aa		12.85	□□□□□ -0.35
PTPN7-204	ENST00000462815	SART3	Q15020	963 aa	Known RBP	12.85	□□□□□ -0.35
PTPN7-204	ENST00000462815	FBXO47	Q5MNV8	452 aa		12.85	□□□□□ -0.35
PTPN7-204	ENST00000462815	TAF2	Q6P1X5	1199 aa		12.85	□□□□□ -0.35
PTPN7-204	ENST00000462815	SMARCC2	Q8TAQ2	1214 aa		12.85	□□□□□ -0.35
PTPN7-204	ENST00000462815	ZBTB10	Q96DT7	871 aa		12.85	□□□□□ -0.35
PTPN7-204	ENST00000462815	RRP36	Q96EU6	259 aa	Known RBP	12.85	□□□□□ -0.35
PTPN7-204	ENST00000462815	IL17RA	Q96F46	866 aa		12.85	□□□□□ -0.35
PTPN7-204	ENST00000462815	AGO3	Q9H9G7	860 aa	Known RBP	12.85	□□□□□ -0.35
PTPN7-204	ENST00000462815	RBM8A	Q9Y5S9	174 aa	Known RBP	12.85	□□□□□ -0.35
PTPN7-204	ENST00000462815	DGKI	O75912	1065 aa		12.84	□□□□□ -0.35
PTPN7-204	ENST00000462815	RB1	P06400	928 aa		12.84	□□□□□ -0.35
PTPN7-204	ENST00000462815	CTNNB1	P35222	781 aa		12.84	□□□□□ -0.35
PTPN7-204	ENST00000462815	PPFIA1	Q13136	1202 aa		12.84	□□□□□ -0.35
PTPN7-204	ENST00000462815	GRIK4	Q16099	956 aa		12.84	□□□□□ -0.35
PTPN7-204	ENST00000462815	UBE2S	Q16763	222 aa		12.84	□□□□□ -0.35
PTPN7-204	ENST00000462815	RTN4RL1	Q86UN2	441 aa	Predicted RBP	12.84	□□□□□ -0.35
PTPN7-204	ENST00000462815	NLRX1	Q86UT6	975 aa		12.84	□□□□□ -0.35
PTPN7-204	ENST00000462815	CMTR1	Q8N1G2	835 aa	Known RBP	12.84	□□□□□ -0.35
PTPN7-204	ENST00000462815	FIBCD1	Q8N539	461 aa		12.84	□□□□□ -0.35
PTPN7-204	ENST00000462815	GIMAP8	Q8ND71	665 aa	Predicted RBP	12.84	□□□□□ -0.35
PTPN7-204	ENST00000462815	RUFY2	Q8WXA3	655 aa		12.84	□□□□□ -0.35
PTPN7-204	ENST00000462815	SEPT1	Q8WYJ6	367 aa		12.84	□□□□□ -0.35
PTPN7-204	ENST00000462815	LSG1	Q9H089	658 aa	Known RBP	12.84	□□□□□ -0.35
PTPN7-204	ENST00000462815	LMAN2L	Q9H0V9	348 aa		12.84	□□□□□ -0.35
PTPN7-204	ENST00000462815	PRKAG3	Q9UGI9	489 aa		12.84	□□□□□ -0.35
PTPN7-204	ENST00000462815	TUBE1	Q9UJT0	475 aa		12.84	□□□□□ -0.35
PTPN7-204	ENST00000462815	PIEZO1	Q92508	2521 aa		12.84	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms