RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 PCDHB13Q9Y5F0 798 aa5.4□□□□□ -1.55
PCDH9-203ENST00000456367 TRPM1Q7Z4N2 1603 aa5.4□□□□□ -1.55
PCDH9-203ENST00000456367 FANCAO15360 1455 aa5.4□□□□□ -1.55
PCDH9-203ENST00000456367 CIAO1O76071 339 aa5.4□□□□□ -1.55
PCDH9-203ENST00000456367 PAX7P23759 505 aa5.4□□□□□ -1.55
PCDH9-203ENST00000456367 ADCY7P51828 1080 aa5.4□□□□□ -1.55
PCDH9-203ENST00000456367 EIF4A1P60842 406 aaKnown RBP5.4□□□□□ -1.55
PCDH9-203ENST00000456367 ORC2Q13416 577 aaPredicted RBP5.4□□□□□ -1.55
PCDH9-203ENST00000456367 AOC3Q16853 763 aa5.4□□□□□ -1.55
PCDH9-203ENST00000456367 C1orf146Q5VVC0 180 aa5.4□□□□□ -1.55
PCDH9-203ENST00000456367 COL23A1Q86Y22 540 aaPredicted RBP5.4□□□□□ -1.55
PCDH9-203ENST00000456367 CRLF3Q8IUI8 442 aa5.4□□□□□ -1.55
PCDH9-203ENST00000456367 RIBC1Q8N443 379 aaPredicted RBP5.4□□□□□ -1.55
PCDH9-203ENST00000456367 UHMK1Q8TAS1 419 aaKnown RBP5.4□□□□□ -1.55
PCDH9-203ENST00000456367 AZI2Q9H6S1 392 aa5.4□□□□□ -1.55
PCDH9-203ENST00000456367 IFT122Q9HBG6 1241 aa5.4□□□□□ -1.55
PCDH9-203ENST00000456367 CORO1CQ9ULV4 474 aaPredicted RBP5.4□□□□□ -1.55
PCDH9-203ENST00000456367 SSX2IPQ9Y2D8 614 aa5.4□□□□□ -1.55
PCDH9-203ENST00000456367 A0A1W2PQJ5 194 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 POC1B-GALNT4F8VUJ3 575 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 EXOC3O60645 756 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 SERPINB3P29508 390 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 ARFIP2P53365 341 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 HDLBPQ00341 1268 aaKnown RBP5.39□□□□□ -1.55
PCDH9-203ENST00000456367 KCNB1Q14721 858 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 HADHQ16836 314 aaKnown RBP5.39□□□□□ -1.55
PCDH9-203ENST00000456367 WASHC2DQ5SRD0 308 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 IRGCQ6NXR0 463 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 ALKBH5Q6P6C2 394 aaKnown RBP5.39□□□□□ -1.55
PCDH9-203ENST00000456367 DYMQ7RTS9 669 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 RASSF3Q86WH2 238 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 REXO1Q8N1G1 1221 aaKnown RBP5.39□□□□□ -1.55
PCDH9-203ENST00000456367 ENGASEQ8NFI3 743 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 CXorf38Q8TB03 319 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 MRRFQ96E11 262 aaKnown RBP5.39□□□□□ -1.55
PCDH9-203ENST00000456367 PNKPQ96T60 521 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 UPF3AQ9H1J1 476 aaKnown RBP5.39□□□□□ -1.55
PCDH9-203ENST00000456367 PANK4Q9NVE7 773 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 TUBA8Q9NY65 449 aaPredicted RBP5.39□□□□□ -1.55
PCDH9-203ENST00000456367 EHD2Q9NZN4 543 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 TTC26A0AVF1 554 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 SH2B2O14492 632 aaPredicted RBP5.39□□□□□ -1.55
PCDH9-203ENST00000456367 ABCB4P21439 1286 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 STAT2P52630 851 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 BFSP1Q12934 665 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 KLHL38Q2WGJ6 581 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 NEK8Q86SG6 692 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 ZSCAN29Q8IWY8 852 aaPredicted RBP5.39□□□□□ -1.55
PCDH9-203ENST00000456367 GSPT2Q8IYD1 628 aaKnown RBP5.39□□□□□ -1.55
PCDH9-203ENST00000456367 STAG2Q8N3U4 1231 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 CCDC28BQ9BUN5 200 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 ATP8A2Q9NTI2 1148 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 MRGBPQ9NV56 204 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 ZNF446Q9NWS9 450 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 COMMD10Q9Y6G5 202 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 PFASO15067 1338 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 MAP3K15Q6ZN16 1313 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 A0A087WWV3 80 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 IQCA1LA6NCM1 817 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 PABPN1LA6NDY0 278 aaKnown RBP5.39□□□□□ -1.55
PCDH9-203ENST00000456367 hCG_1984214I3L0E3 225 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 ARHGEF9O43307 516 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 PRPF3O43395 683 aaKnown RBP5.39□□□□□ -1.55
PCDH9-203ENST00000456367 KDM1AO60341 852 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 TRPA1O75762 1119 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 FGGP02679 453 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 YWHAEP62258 255 aaKnown RBP5.39□□□□□ -1.55
PCDH9-203ENST00000456367 TBCCQ15814 346 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 TMEM259Q4ZIN3 620 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 DCUN1D2Q6PH85 259 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 BTNL9Q6UXG8 535 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 PCGF5Q86SE9 256 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 ANKRD13AQ8IZ07 590 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 ZNF713Q8N859 430 aaPredicted RBP5.39□□□□□ -1.55
PCDH9-203ENST00000456367 TERB1Q8NA31 727 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 GDAP1Q8TB36 358 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 LPIN2Q92539 896 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 ALKBH8Q96BT7 664 aaKnown RBP5.39□□□□□ -1.55
PCDH9-203ENST00000456367 SIRT1Q96EB6 747 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 HINFPQ9BQA5 517 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 PARVBQ9HBI1 364 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 ATG3Q9NT62 314 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 LRCH1Q9Y2L9 728 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 PVALEFA0A1B0GWK0 134 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 RASA4BC9J798 803 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 IGF2BP3O00425 579 aaKnown RBP eCLIP5.39□□□□□ -1.55
PCDH9-203ENST00000456367 RASA4O43374 803 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 FOXO3O43524 673 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 ORC4O43929 436 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 DEAF1O75398 565 aaPredicted RBP5.39□□□□□ -1.55
PCDH9-203ENST00000456367 CHN1P15882 459 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 SLCO1A2P46721 670 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 MMP14P50281 582 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 INAQ16352 499 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 SPDYCQ5MJ68 293 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 NFRKBQ6P4R8 1299 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 RAD9BQ6WBX8 426 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 FUKQ8N0W3 1084 aa5.39□□□□□ -1.55
PCDH9-203ENST00000456367 NOA1Q8NC60 698 aaKnown RBP5.39□□□□□ -1.55
PCDH9-203ENST00000456367 CCDC138Q96M89 665 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms