RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 DSCC1Q9BVC3 393 aa6.94□□□□□ -1.3
HLA-DPA3-207ENST00000454398 FAM49AQ9H0Q0 323 aaPredicted RBP6.94□□□□□ -1.3
HLA-DPA3-207ENST00000454398 RNPEPQ9H4A4 650 aa6.94□□□□□ -1.3
HLA-DPA3-207ENST00000454398 INSL6Q9Y581 213 aa6.94□□□□□ -1.3
HLA-DPA3-207ENST00000454398 KAT6AQ92794 2004 aa6.94□□□□□ -1.3
HLA-DPA3-207ENST00000454398 FRMPD4Q14CM0 1322 aa6.94□□□□□ -1.3
HLA-DPA3-207ENST00000454398 ADGRA3Q8IWK6 1321 aa6.94□□□□□ -1.3
HLA-DPA3-207ENST00000454398 VPS13AQ96RL7 3174 aa6.94□□□□□ -1.3
HLA-DPA3-207ENST00000454398 POTEB3A0JP26 581 aa6.93□□□□□ -1.3
HLA-DPA3-207ENST00000454398 PALM3A6NDB9 673 aaPredicted RBP6.93□□□□□ -1.3
HLA-DPA3-207ENST00000454398 IFIT3O14879 490 aaKnown RBP6.93□□□□□ -1.3
HLA-DPA3-207ENST00000454398 DCXO43602 365 aa6.93□□□□□ -1.3
HLA-DPA3-207ENST00000454398 EFCAB14O75071 495 aa6.93□□□□□ -1.3
HLA-DPA3-207ENST00000454398 CHRNA1P02708 482 aa6.93□□□□□ -1.3
HLA-DPA3-207ENST00000454398 SP100P23497 879 aaPredicted RBP6.93□□□□□ -1.3
HLA-DPA3-207ENST00000454398 DNAJB1P25685 340 aa6.93□□□□□ -1.3
HLA-DPA3-207ENST00000454398 IRS1P35568 1242 aa6.93□□□□□ -1.3
HLA-DPA3-207ENST00000454398 MFAP1P55081 439 aaKnown RBP6.93□□□□□ -1.3
HLA-DPA3-207ENST00000454398 HYAL1Q12794 435 aa6.93□□□□□ -1.3
HLA-DPA3-207ENST00000454398 PPFIA1Q13136 1202 aa6.93□□□□□ -1.3
HLA-DPA3-207ENST00000454398 CAMK1Q14012 370 aa6.93□□□□□ -1.3
HLA-DPA3-207ENST00000454398 LPIN1Q14693 890 aa6.93□□□□□ -1.3
HLA-DPA3-207ENST00000454398 PTPROQ16827 1216 aa6.93□□□□□ -1.3
HLA-DPA3-207ENST00000454398 CSPP1Q1MSJ5 1256 aa6.93□□□□□ -1.3
HLA-DPA3-207ENST00000454398 POTEBQ6S5H4 581 aa6.93□□□□□ -1.3
HLA-DPA3-207ENST00000454398 METTL7BQ6UX53 244 aa6.93□□□□□ -1.3
HLA-DPA3-207ENST00000454398 ADGRD2Q7Z7M1 963 aa6.93□□□□□ -1.3
HLA-DPA3-207ENST00000454398 NEK9Q8TD19 979 aa6.93□□□□□ -1.3
HLA-DPA3-207ENST00000454398 TRAPPC12Q8WVT3 735 aa6.93□□□□□ -1.3
HLA-DPA3-207ENST00000454398 PGBD1Q96JS3 809 aa6.93□□□□□ -1.3
HLA-DPA3-207ENST00000454398 INPP4AQ96PE3 977 aaPredicted RBP6.93□□□□□ -1.3
HLA-DPA3-207ENST00000454398 PPP1R16BQ96T49 567 aa6.93□□□□□ -1.3
HLA-DPA3-207ENST00000454398 KRT23Q9C075 422 aa6.93□□□□□ -1.3
HLA-DPA3-207ENST00000454398 NSUN3Q9H649 340 aaKnown RBP6.93□□□□□ -1.3
HLA-DPA3-207ENST00000454398 IGFLR1Q9H665 355 aa6.93□□□□□ -1.3
HLA-DPA3-207ENST00000454398 RC3H2Q9HBD1 1191 aaKnown RBP6.93□□□□□ -1.3
HLA-DPA3-207ENST00000454398 ALG13Q9NP73 1137 aaKnown RBP6.93□□□□□ -1.3
HLA-DPA3-207ENST00000454398 KMT2EQ8IZD2 1858 aa6.93□□□□□ -1.3
HLA-DPA3-207ENST00000454398 ZFHX2Q9C0A1 2572 aaPredicted RBP6.93□□□□□ -1.3
HLA-DPA3-207ENST00000454398 SPTBN4Q9H254 2564 aa6.93□□□□□ -1.3
HLA-DPA3-207ENST00000454398 TTC3P53804 2025 aa6.93□□□□□ -1.3
HLA-DPA3-207ENST00000454398 PRR33A8MZF0 331 aa6.92□□□□□ -1.3
HLA-DPA3-207ENST00000454398 SPATA31C2B4DYI2 1134 aa6.92□□□□□ -1.3
HLA-DPA3-207ENST00000454398 H3BNC9 293 aa6.92□□□□□ -1.3
HLA-DPA3-207ENST00000454398 FIBPO43427 364 aa6.92□□□□□ -1.3
HLA-DPA3-207ENST00000454398 PPFIA4O75335 1185 aa6.92□□□□□ -1.3
HLA-DPA3-207ENST00000454398 PARNO95453 639 aaKnown RBP6.92□□□□□ -1.3
HLA-DPA3-207ENST00000454398 CYP21A2P08686 494 aa6.92□□□□□ -1.3
HLA-DPA3-207ENST00000454398 ARP10275 920 aa6.92□□□□□ -1.3
HLA-DPA3-207ENST00000454398 CD52P31358 61 aa6.92□□□□□ -1.3
HLA-DPA3-207ENST00000454398 TCF7P36402 384 aaPredicted RBP6.92□□□□□ -1.3
HLA-DPA3-207ENST00000454398 MRE11P49959 708 aa6.92□□□□□ -1.3
HLA-DPA3-207ENST00000454398 IRX6P78412 446 aaPredicted RBP6.92□□□□□ -1.3
HLA-DPA3-207ENST00000454398 ADAM17P78536 824 aa6.92□□□□□ -1.3
HLA-DPA3-207ENST00000454398 NHLH1Q02575 133 aa6.92□□□□□ -1.3
HLA-DPA3-207ENST00000454398 TMEM266Q2M3C6 531 aa6.92□□□□□ -1.3
HLA-DPA3-207ENST00000454398 RALYLQ86SE5 291 aaKnown RBP6.92□□□□□ -1.3
HLA-DPA3-207ENST00000454398 FEZF2Q8TBJ5 459 aa6.92□□□□□ -1.3
HLA-DPA3-207ENST00000454398 DNAJB3Q8WWF6 145 aa6.92□□□□□ -1.3
HLA-DPA3-207ENST00000454398 TOP1MTQ969P6 601 aa6.92□□□□□ -1.3
HLA-DPA3-207ENST00000454398 PABPC5Q96DU9 382 aaKnown RBP6.92□□□□□ -1.3
HLA-DPA3-207ENST00000454398 FBXL18Q96ME1 805 aa6.92□□□□□ -1.3
HLA-DPA3-207ENST00000454398 LRRC2Q9BYS8 371 aa6.92□□□□□ -1.3
HLA-DPA3-207ENST00000454398 CNNM2Q9H8M5 875 aa6.92□□□□□ -1.3
HLA-DPA3-207ENST00000454398 AGO3Q9H9G7 860 aaKnown RBP6.92□□□□□ -1.3
HLA-DPA3-207ENST00000454398 LMCD1Q9NZU5 365 aa6.92□□□□□ -1.3
HLA-DPA3-207ENST00000454398 CDH22Q9UJ99 828 aa6.92□□□□□ -1.3
HLA-DPA3-207ENST00000454398 TUBE1Q9UJT0 475 aa6.92□□□□□ -1.3
HLA-DPA3-207ENST00000454398 ZNF215Q9UL58 517 aaPredicted RBP6.92□□□□□ -1.3
HLA-DPA3-207ENST00000454398 BARX2Q9UMQ3 279 aaPredicted RBP6.92□□□□□ -1.3
HLA-DPA3-207ENST00000454398 ARIH1Q9Y4X5 557 aaPredicted RBP6.92□□□□□ -1.3
HLA-DPA3-207ENST00000454398 CDY2AQ9Y6F7 541 aa6.92□□□□□ -1.3
HLA-DPA3-207ENST00000454398 MRPL42Q9Y6G3 142 aaKnown RBP6.92□□□□□ -1.3
HLA-DPA3-207ENST00000454398 PNMA6FA0A0J9YX94 578 aa6.91□□□□□ -1.3
HLA-DPA3-207ENST00000454398 E7EWF7 191 aa6.91□□□□□ -1.3
HLA-DPA3-207ENST00000454398 ATP9AO75110 1047 aa6.91□□□□□ -1.3
HLA-DPA3-207ENST00000454398 KCNA2P16389 499 aa6.91□□□□□ -1.3
HLA-DPA3-207ENST00000454398 ITGB5P18084 799 aa6.91□□□□□ -1.3
HLA-DPA3-207ENST00000454398 NDUFV1P49821 464 aa6.91□□□□□ -1.3
HLA-DPA3-207ENST00000454398 MGAT3Q09327 533 aa6.91□□□□□ -1.3
HLA-DPA3-207ENST00000454398 TROAPQ12815 778 aa6.91□□□□□ -1.3
HLA-DPA3-207ENST00000454398 BTG3Q14201 252 aaPredicted RBP6.91□□□□□ -1.3
HLA-DPA3-207ENST00000454398 WTAPQ15007 396 aa6.91□□□□□ -1.3
HLA-DPA3-207ENST00000454398 GRIK4Q16099 956 aa6.91□□□□□ -1.3
HLA-DPA3-207ENST00000454398 GNPTABQ3T906 1256 aa6.91□□□□□ -1.3
HLA-DPA3-207ENST00000454398 CCDC178Q5BJE1 867 aa6.91□□□□□ -1.3
HLA-DPA3-207ENST00000454398 RBM23Q86U06 439 aaKnown RBP6.91□□□□□ -1.3
HLA-DPA3-207ENST00000454398 SKAP1Q86WV1 359 aa6.91□□□□□ -1.3
HLA-DPA3-207ENST00000454398 ADHFE1Q8IWW8 467 aa6.91□□□□□ -1.3
HLA-DPA3-207ENST00000454398 ZNF654Q8IZM8 581 aa6.91□□□□□ -1.3
HLA-DPA3-207ENST00000454398 CCDC82Q8N4S0 544 aa6.91□□□□□ -1.3
HLA-DPA3-207ENST00000454398 FIBCD1Q8N539 461 aa6.91□□□□□ -1.3
HLA-DPA3-207ENST00000454398 SMARCC2Q8TAQ2 1214 aa6.91□□□□□ -1.3
HLA-DPA3-207ENST00000454398 IL17RAQ96F46 866 aa6.91□□□□□ -1.3
HLA-DPA3-207ENST00000454398 SNX27Q96L92 541 aa6.91□□□□□ -1.3
HLA-DPA3-207ENST00000454398 RIOX1Q9H6W3 641 aa6.91□□□□□ -1.3
HLA-DPA3-207ENST00000454398 LY9Q9HBG7 655 aa6.91□□□□□ -1.3
HLA-DPA3-207ENST00000454398 FAM86C1Q9NVL1 165 aa6.91□□□□□ -1.3
HLA-DPA3-207ENST00000454398 GINS2Q9Y248 185 aa6.91□□□□□ -1.3
HLA-DPA3-207ENST00000454398 RIF1Q5UIP0 2472 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms