RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 TRAF7Q6Q0C0 670 aa16.62■□□□□ 0.25
HSPG2-207ENST00000453796 OTOP2Q7RTS6 562 aa16.62■□□□□ 0.25
HSPG2-207ENST00000453796 SERINC5Q86VE9 423 aa16.62■□□□□ 0.25
HSPG2-207ENST00000453796 RETREG2Q8NC44 543 aa16.62■□□□□ 0.25
HSPG2-207ENST00000453796 RASGRP4Q8TDF6 673 aa16.62■□□□□ 0.25
HSPG2-207ENST00000453796 SEPT1Q8WYJ6 367 aa16.62■□□□□ 0.25
HSPG2-207ENST00000453796 RNPEPQ9H4A4 650 aa16.62■□□□□ 0.25
HSPG2-207ENST00000453796 AGO4Q9HCK5 861 aaKnown RBP16.62■□□□□ 0.25
HSPG2-207ENST00000453796 PKD2L1Q9P0L9 805 aa16.62■□□□□ 0.25
HSPG2-207ENST00000453796 MYH9P35579 1960 aaKnown RBP16.61■□□□□ 0.25
HSPG2-207ENST00000453796 CPLX1O14810 134 aa16.61■□□□□ 0.25
HSPG2-207ENST00000453796 PFKFB2O60825 505 aa16.61■□□□□ 0.25
HSPG2-207ENST00000453796 DEXIO95424 95 aa16.61■□□□□ 0.25
HSPG2-207ENST00000453796 SELPP16109 830 aa16.61■□□□□ 0.25
HSPG2-207ENST00000453796 ITGB3BPQ13352 177 aaPredicted RBP16.61■□□□□ 0.25
HSPG2-207ENST00000453796 NPY5RQ15761 445 aa16.61■□□□□ 0.25
HSPG2-207ENST00000453796 DEFB128Q7Z7B8 93 aa16.61■□□□□ 0.25
HSPG2-207ENST00000453796 TRIM22Q8IYM9 498 aa16.61■□□□□ 0.25
HSPG2-207ENST00000453796 BICD2Q8TD16 824 aa16.61■□□□□ 0.25
HSPG2-207ENST00000453796 AIFM3Q96NN9 605 aa16.61■□□□□ 0.25
HSPG2-207ENST00000453796 PCYT2Q99447 389 aa16.61■□□□□ 0.25
HSPG2-207ENST00000453796 TTYH1Q9H313 450 aaPredicted RBP16.61■□□□□ 0.25
HSPG2-207ENST00000453796 SLC9A2Q9UBY0 812 aa16.61■□□□□ 0.25
HSPG2-207ENST00000453796 ZNF215Q9UL58 517 aaPredicted RBP16.61■□□□□ 0.25
HSPG2-207ENST00000453796 EMSYQ7Z589 1322 aa16.61■□□□□ 0.25
HSPG2-207ENST00000453796 TMEM265A0A087WTH1 108 aa16.6■□□□□ 0.25
HSPG2-207ENST00000453796 C17orf102A2RUQ5 167 aa16.6■□□□□ 0.25
HSPG2-207ENST00000453796 GRXCR1A8MXD5 290 aa16.6■□□□□ 0.25
HSPG2-207ENST00000453796 M0R2N6 131 aa16.6■□□□□ 0.25
HSPG2-207ENST00000453796 TREHO43280 583 aa16.6■□□□□ 0.25
HSPG2-207ENST00000453796 LGR5O75473 907 aa16.6■□□□□ 0.25
HSPG2-207ENST00000453796 CIITAP33076 1130 aa16.6■□□□□ 0.25
HSPG2-207ENST00000453796 C8orf34Q49A92 452 aa16.6■□□□□ 0.25
HSPG2-207ENST00000453796 ZNF697Q5TEC3 545 aa16.6■□□□□ 0.25
HSPG2-207ENST00000453796 LRRC8DQ7L1W4 858 aa16.6■□□□□ 0.25
HSPG2-207ENST00000453796 GUCD1Q96NT3 240 aa16.6■□□□□ 0.25
HSPG2-207ENST00000453796 JPH1Q9HDC5 661 aaPredicted RBP16.6■□□□□ 0.25
HSPG2-207ENST00000453796 MICAL3Q7RTP6 2002 aa16.6■□□□□ 0.25
HSPG2-207ENST00000453796 DHX15O43143 795 aaKnown RBP16.59■□□□□ 0.25
HSPG2-207ENST00000453796 ATG7O95352 703 aa16.59■□□□□ 0.25
HSPG2-207ENST00000453796 PARNO95453 639 aaKnown RBP16.59■□□□□ 0.25
HSPG2-207ENST00000453796 LARGE1O95461 756 aa16.59■□□□□ 0.25
HSPG2-207ENST00000453796 CTDNEP1O95476 244 aa16.59■□□□□ 0.25
HSPG2-207ENST00000453796 CXCL10P02778 98 aa16.59■□□□□ 0.25
HSPG2-207ENST00000453796 DNAJB2P25686 324 aa16.59■□□□□ 0.25
HSPG2-207ENST00000453796 ANKRD1Q15327 319 aa16.59■□□□□ 0.25
HSPG2-207ENST00000453796 ZNF618Q5T7W0 954 aa16.59■□□□□ 0.25
HSPG2-207ENST00000453796 CPLX2Q6PUV4 134 aaKnown RBP16.59■□□□□ 0.25
HSPG2-207ENST00000453796 PLA2G4DQ86XP0 818 aa16.59■□□□□ 0.25
HSPG2-207ENST00000453796 FAM177A1Q8N128 213 aaPredicted RBP16.59■□□□□ 0.25
HSPG2-207ENST00000453796 DAGLBQ8NCG7 672 aa16.59■□□□□ 0.25
HSPG2-207ENST00000453796 ATP6V0A1Q93050 837 aa16.59■□□□□ 0.25
HSPG2-207ENST00000453796 PBX4Q9BYU1 374 aa16.59■□□□□ 0.25
HSPG2-207ENST00000453796 SLKQ9H2G2 1235 aaPredicted RBP16.59■□□□□ 0.25
HSPG2-207ENST00000453796 MTIF3Q9H2K0 278 aaKnown RBP16.59■□□□□ 0.25
HSPG2-207ENST00000453796 SEMA6BQ9H3T3 888 aa16.59■□□□□ 0.25
HSPG2-207ENST00000453796 SETD4Q9NVD3 440 aa16.59■□□□□ 0.25
HSPG2-207ENST00000453796 STK36Q9NRP7 1315 aa16.59■□□□□ 0.25
HSPG2-207ENST00000453796 NBNO60934 754 aa16.58■□□□□ 0.24
HSPG2-207ENST00000453796 ZNF76P36508 570 aa16.58■□□□□ 0.24
HSPG2-207ENST00000453796 PBX2P40425 430 aa16.58■□□□□ 0.24
HSPG2-207ENST00000453796 NLRP5P59047 1200 aa16.58■□□□□ 0.24
HSPG2-207ENST00000453796 ACTR2P61160 394 aa16.58■□□□□ 0.24
HSPG2-207ENST00000453796 MBTPS1Q14703 1052 aa16.58■□□□□ 0.24
HSPG2-207ENST00000453796 LMBR1Q8WVP7 490 aa16.58■□□□□ 0.24
HSPG2-207ENST00000453796 LENG9Q96B70 501 aa16.58■□□□□ 0.24
HSPG2-207ENST00000453796 FAM161BQ96MY7 647 aa16.58■□□□□ 0.24
HSPG2-207ENST00000453796 SDF4Q9BRK5 362 aa16.58■□□□□ 0.24
HSPG2-207ENST00000453796 SMARCAD1Q9H4L7 1026 aa16.58■□□□□ 0.24
HSPG2-207ENST00000453796 ERAP1Q9NZ08 941 aa16.58■□□□□ 0.24
HSPG2-207ENST00000453796 PCDHA4Q9UN74 947 aa16.58■□□□□ 0.24
HSPG2-207ENST00000453796 LOXHD1Q8IVV2 1947 aa16.57■□□□□ 0.24
HSPG2-207ENST00000453796 NRCAMQ92823 1304 aa16.57■□□□□ 0.24
HSPG2-207ENST00000453796 IGKV6D-21A0A0A0MT36 114 aa16.57■□□□□ 0.24
HSPG2-207ENST00000453796 RBAK-RBAKDNI3L0D1 243 aa16.57■□□□□ 0.24
HSPG2-207ENST00000453796 CCNE2O96020 404 aa16.57■□□□□ 0.24
HSPG2-207ENST00000453796 SETQ01105 290 aaPredicted RBP16.57■□□□□ 0.24
HSPG2-207ENST00000453796 ME3Q16798 604 aa16.57■□□□□ 0.24
HSPG2-207ENST00000453796 TCTN1Q2MV58 587 aa16.57■□□□□ 0.24
HSPG2-207ENST00000453796 STXBP5LQ9Y2K9 1186 aa16.57■□□□□ 0.24
HSPG2-207ENST00000453796 SLC4A7Q9Y6M7 1214 aa16.57■□□□□ 0.24
HSPG2-207ENST00000453796 MYO9BQ13459 2157 aa16.57■□□□□ 0.24
HSPG2-207ENST00000453796 CHD9Q3L8U1 2897 aa16.56■□□□□ 0.24
HSPG2-207ENST00000453796 EYSQ5T1H1 3165 aa16.56■□□□□ 0.24
HSPG2-207ENST00000453796 IPO5O00410 1097 aaKnown RBP16.56■□□□□ 0.24
HSPG2-207ENST00000453796 DTNBO60941 627 aa16.56■□□□□ 0.24
HSPG2-207ENST00000453796 CAND2O75155 1236 aa16.56■□□□□ 0.24
HSPG2-207ENST00000453796 CDKL5O76039 1030 aa16.56■□□□□ 0.24
HSPG2-207ENST00000453796 GNAT1P11488 350 aa16.56■□□□□ 0.24
HSPG2-207ENST00000453796 ACTN1P12814 892 aa16.56■□□□□ 0.24
HSPG2-207ENST00000453796 MARK3P27448 753 aa16.56■□□□□ 0.24
HSPG2-207ENST00000453796 NEK4P51957 841 aa16.56■□□□□ 0.24
HSPG2-207ENST00000453796 ABHD15Q6UXT9 468 aa16.56■□□□□ 0.24
HSPG2-207ENST00000453796 BLIDQ8IZY5 108 aa16.56■□□□□ 0.24
HSPG2-207ENST00000453796 TIFAQ96CG3 184 aa16.56■□□□□ 0.24
HSPG2-207ENST00000453796 PHF20Q9BVI0 1012 aa16.56■□□□□ 0.24
HSPG2-207ENST00000453796 FTOQ9C0B1 505 aaKnown RBP eCLIP16.56■□□□□ 0.24
HSPG2-207ENST00000453796 EVPLQ92817 2033 aa16.55■□□□□ 0.24
HSPG2-207ENST00000453796 MBLAC1A4D2B0 266 aaPredicted RBP16.55■□□□□ 0.24
HSPG2-207ENST00000453796 ZBBXA8MT70 800 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms