RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 MXRA8Q9BRK3 442 aa19.36■□□□□ 0.69
SMC6-206ENST00000446852 RUSC1Q9BVN2 902 aa19.36■□□□□ 0.69
SMC6-206ENST00000446852 ZHX3Q9H4I2 956 aa19.36■□□□□ 0.69
SMC6-206ENST00000446852 RABGAP1Q9Y3P9 1069 aa19.36■□□□□ 0.69
SMC6-206ENST00000446852 EYA4O95677 639 aa19.36■□□□□ 0.69
SMC6-206ENST00000446852 TUBB4AP04350 444 aa19.36■□□□□ 0.69
SMC6-206ENST00000446852 CCDC175P0C221 793 aa19.36■□□□□ 0.69
SMC6-206ENST00000446852 EPS15P42566 896 aa19.36■□□□□ 0.69
SMC6-206ENST00000446852 CASP5P51878 434 aa19.36■□□□□ 0.69
SMC6-206ENST00000446852 RBM10P98175 930 aaKnown RBP19.36■□□□□ 0.69
SMC6-206ENST00000446852 NELFCDQ8IXH7 590 aa19.36■□□□□ 0.69
SMC6-206ENST00000446852 PIGOQ8TEQ8 1089 aa19.36■□□□□ 0.69
SMC6-206ENST00000446852 UPF1Q92900 1129 aaKnown RBP eCLIP19.36■□□□□ 0.69
SMC6-206ENST00000446852 UNC45AQ9H3U1 944 aa19.36■□□□□ 0.69
SMC6-206ENST00000446852 TUFT1Q9NNX1 390 aa19.36■□□□□ 0.69
SMC6-206ENST00000446852 DNAI1Q9UI46 699 aa19.36■□□□□ 0.69
SMC6-206ENST00000446852 CAPN11Q9UMQ6 739 aa19.36■□□□□ 0.69
SMC6-206ENST00000446852 A0A0U1RQJ8 604 aa19.35■□□□□ 0.69
SMC6-206ENST00000446852 GOLGA6L9A6NEM1 432 aa19.35■□□□□ 0.69
SMC6-206ENST00000446852 B3GNT9Q6UX72 402 aa19.35■□□□□ 0.69
SMC6-206ENST00000446852 ARHGAP27Q6ZUM4 889 aa19.35■□□□□ 0.69
SMC6-206ENST00000446852 MCF2L2Q86YR7 1114 aa19.35■□□□□ 0.69
SMC6-206ENST00000446852 TMTC1Q8IUR5 882 aa19.35■□□□□ 0.69
SMC6-206ENST00000446852 GPC2Q8N158 579 aa19.35■□□□□ 0.69
SMC6-206ENST00000446852 ZNF280CQ8ND82 737 aa19.35■□□□□ 0.69
SMC6-206ENST00000446852 ATRIPQ8WXE1 791 aa19.35■□□□□ 0.69
SMC6-206ENST00000446852 ERGIC2Q96RQ1 377 aa19.35■□□□□ 0.69
SMC6-206ENST00000446852 DNAJC7Q99615 494 aa19.35■□□□□ 0.69
SMC6-206ENST00000446852 KCTD10Q9H3F6 313 aa19.35■□□□□ 0.69
SMC6-206ENST00000446852 PHLPP2Q6ZVD8 1323 aa19.35■□□□□ 0.69
SMC6-206ENST00000446852 WDR90Q96KV7 1748 aa19.35■□□□□ 0.69
SMC6-206ENST00000446852 RSPH10B2B2RC85 870 aa19.35■□□□□ 0.69
SMC6-206ENST00000446852 IPO5O00410 1097 aaKnown RBP19.35■□□□□ 0.69
SMC6-206ENST00000446852 FGFR1OPO95684 399 aaKnown RBP19.35■□□□□ 0.69
SMC6-206ENST00000446852 RSPH10BP0C881 870 aa19.35■□□□□ 0.69
SMC6-206ENST00000446852 ERCC3P19447 782 aa19.35■□□□□ 0.69
SMC6-206ENST00000446852 VWA3BQ502W6 1294 aa19.35■□□□□ 0.69
SMC6-206ENST00000446852 SFR1Q86XK3 245 aa19.35■□□□□ 0.69
SMC6-206ENST00000446852 TPH2Q8IWU9 490 aa19.35■□□□□ 0.69
SMC6-206ENST00000446852 SYTL5Q8TDW5 730 aaPredicted RBP19.35■□□□□ 0.69
SMC6-206ENST00000446852 ATG4CQ96DT6 458 aa19.35■□□□□ 0.69
SMC6-206ENST00000446852 BCAS3Q9H6U6 928 aa19.35■□□□□ 0.69
SMC6-206ENST00000446852 PICK1Q9NRD5 415 aa19.35■□□□□ 0.69
SMC6-206ENST00000446852 LUC7L2Q9Y383 392 aaKnown RBP19.35■□□□□ 0.69
SMC6-206ENST00000446852 MYH11P35749 1972 aa19.35■□□□□ 0.69
SMC6-206ENST00000446852 ZBTB39O15060 712 aa19.34■□□□□ 0.69
SMC6-206ENST00000446852 MAN2A1Q16706 1144 aa19.34■□□□□ 0.69
SMC6-206ENST00000446852 CYP26C1Q6V0L0 522 aa19.34■□□□□ 0.69
SMC6-206ENST00000446852 NDST4Q9H3R1 872 aa19.34■□□□□ 0.69
SMC6-206ENST00000446852 WRAP73Q9P2S5 460 aaPredicted RBP19.34■□□□□ 0.69
SMC6-206ENST00000446852 VWA5AO00534 786 aa19.34■□□□□ 0.69
SMC6-206ENST00000446852 LMNB1P20700 586 aa19.34■□□□□ 0.69
SMC6-206ENST00000446852 FKBP3Q00688 224 aaKnown RBP19.34■□□□□ 0.69
SMC6-206ENST00000446852 ZNF710Q8N1W2 664 aa19.34■□□□□ 0.69
SMC6-206ENST00000446852 OR8K1Q8NGG5 319 aa19.34■□□□□ 0.69
SMC6-206ENST00000446852 CHP1Q99653 195 aa19.34■□□□□ 0.69
SMC6-206ENST00000446852 WDR11Q9BZH6 1224 aa19.34■□□□□ 0.69
SMC6-206ENST00000446852 AS3MTQ9HBK9 375 aa19.34■□□□□ 0.69
SMC6-206ENST00000446852 POLD4Q9HCU8 107 aa19.34■□□□□ 0.69
SMC6-206ENST00000446852 AGPAT5Q9NUQ2 364 aa19.34■□□□□ 0.69
SMC6-206ENST00000446852 ZHX2Q9Y6X8 837 aa19.34■□□□□ 0.69
SMC6-206ENST00000446852 TRAF5O00463 557 aa19.33■□□□□ 0.69
SMC6-206ENST00000446852 TRIM21P19474 475 aaKnown RBP19.33■□□□□ 0.69
SMC6-206ENST00000446852 HMGCS2P54868 508 aa19.33■□□□□ 0.69
SMC6-206ENST00000446852 RPS6P62753 249 aaKnown RBP19.33■□□□□ 0.69
SMC6-206ENST00000446852 RINT1Q6NUQ1 792 aa19.33■□□□□ 0.69
SMC6-206ENST00000446852 KCTD17Q8N5Z5 321 aa19.33■□□□□ 0.69
SMC6-206ENST00000446852 TEKT3Q9BXF9 490 aa19.33■□□□□ 0.69
SMC6-206ENST00000446852 L2HGDHQ9H9P8 463 aa19.33■□□□□ 0.69
SMC6-206ENST00000446852 KCNH7Q9NS40 1196 aa19.33■□□□□ 0.69
SMC6-206ENST00000446852 FRMPD4Q14CM0 1322 aa19.33■□□□□ 0.69
SMC6-206ENST00000446852 MRPS9P82933 396 aaKnown RBP19.33■□□□□ 0.68
SMC6-206ENST00000446852 FKBP15Q5T1M5 1219 aa19.33■□□□□ 0.68
SMC6-206ENST00000446852 WDR59Q6PJI9 974 aa19.33■□□□□ 0.68
SMC6-206ENST00000446852 EPM2AIP1Q7L775 607 aaPredicted RBP19.33■□□□□ 0.68
SMC6-206ENST00000446852 KRT26Q7Z3Y9 468 aa19.33■□□□□ 0.68
SMC6-206ENST00000446852 ACRBPQ8NEB7 543 aa19.33■□□□□ 0.68
SMC6-206ENST00000446852 KLRG1Q96E93 195 aa19.33■□□□□ 0.68
SMC6-206ENST00000446852 PKD2L1Q9P0L9 805 aa19.33■□□□□ 0.68
SMC6-206ENST00000446852 ZBED4O75132 1171 aa19.32■□□□□ 0.68
SMC6-206ENST00000446852 BCRP11274 1271 aa19.32■□□□□ 0.68
SMC6-206ENST00000446852 HOXD13P35453 343 aa19.32■□□□□ 0.68
SMC6-206ENST00000446852 PCNX4Q63HM2 1172 aa19.32■□□□□ 0.68
SMC6-206ENST00000446852 TAAR1Q96RJ0 339 aa19.32■□□□□ 0.68
SMC6-206ENST00000446852 WDR24Q96S15 920 aa19.32■□□□□ 0.68
SMC6-206ENST00000446852 RIT2Q99578 217 aa19.32■□□□□ 0.68
SMC6-206ENST00000446852 SIK3Q9Y2K2 1263 aa19.32■□□□□ 0.68
SMC6-206ENST00000446852 COL4A3BPQ9Y5P4 624 aa19.32■□□□□ 0.68
SMC6-206ENST00000446852 PTPRFP10586 1907 aa19.32■□□□□ 0.68
SMC6-206ENST00000446852 DDX39AO00148 427 aaKnown RBP19.32■□□□□ 0.68
SMC6-206ENST00000446852 RETREG2Q8NC44 543 aa19.32■□□□□ 0.68
SMC6-206ENST00000446852 TRERF1Q96PN7 1200 aa19.32■□□□□ 0.68
SMC6-206ENST00000446852 NUP58Q9BVL2 599 aa19.32■□□□□ 0.68
SMC6-206ENST00000446852 ZNF215Q9UL58 517 aaPredicted RBP19.32■□□□□ 0.68
SMC6-206ENST00000446852 RIPK3Q9Y572 518 aa19.32■□□□□ 0.68
SMC6-206ENST00000446852 EIF2AK2P19525 551 aaKnown RBP19.31■□□□□ 0.68
SMC6-206ENST00000446852 EPHA7Q15375 998 aa19.31■□□□□ 0.68
SMC6-206ENST00000446852 TKFCQ3LXA3 575 aa19.31■□□□□ 0.68
SMC6-206ENST00000446852 ZC3H3Q8IXZ2 948 aaKnown RBP19.31■□□□□ 0.68
SMC6-206ENST00000446852 C12orf42Q96LP6 360 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms