RNA–Protein interactions for RNA: ENST00000435197.2

SMG1P3-201, Transcript of SMG1 pseudogene 3, humanhuman

TSL 3

Gene SMG1P3, Length 416 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P3-201ENST00000435197 B4E1Z4 1266 aa20.91■□□□□ 0.94
SMG1P3-201ENST00000435197 PPP1R11O60927 126 aaPredicted RBP20.91■□□□□ 0.94
SMG1P3-201ENST00000435197 RB1P06400 928 aa20.91■□□□□ 0.94
SMG1P3-201ENST00000435197 LINC00271P0C7V0 271 aa20.91■□□□□ 0.94
SMG1P3-201ENST00000435197 DLX2Q07687 328 aaPredicted RBP20.91■□□□□ 0.94
SMG1P3-201ENST00000435197 IMMTQ16891 758 aaKnown RBP20.91■□□□□ 0.94
SMG1P3-201ENST00000435197 ZFP91Q96JP5 570 aaPredicted RBP20.91■□□□□ 0.94
SMG1P3-201ENST00000435197 C11orf84Q9BUA3 381 aaPredicted RBP20.91■□□□□ 0.94
SMG1P3-201ENST00000435197 BACH2Q9BYV9 841 aa20.91■□□□□ 0.94
SMG1P3-201ENST00000435197 RBM8AQ9Y5S9 174 aaKnown RBP20.91■□□□□ 0.94
SMG1P3-201ENST00000435197 ADGRA3Q8IWK6 1321 aa20.9■□□□□ 0.94
SMG1P3-201ENST00000435197 GRM6O15303 877 aa20.9■□□□□ 0.94
SMG1P3-201ENST00000435197 CCND2P30279 289 aa20.9■□□□□ 0.94
SMG1P3-201ENST00000435197 STAG2Q8N3U4 1231 aa20.9■□□□□ 0.94
SMG1P3-201ENST00000435197 SAMD3Q8N6K7 520 aa20.9■□□□□ 0.94
SMG1P3-201ENST00000435197 USP26Q9BXU7 913 aa20.9■□□□□ 0.94
SMG1P3-201ENST00000435197 BCAS3Q9H6U6 928 aa20.9■□□□□ 0.94
SMG1P3-201ENST00000435197 SETD4Q9NVD3 440 aa20.9■□□□□ 0.94
SMG1P3-201ENST00000435197 RWDD3Q9Y3V2 267 aa20.9■□□□□ 0.94
SMG1P3-201ENST00000435197 PCDHA1Q9Y5I3 950 aa20.9■□□□□ 0.94
SMG1P3-201ENST00000435197 TBX10O75333 385 aa20.89■□□□□ 0.93
SMG1P3-201ENST00000435197 BMPR1AP36894 532 aa20.89■□□□□ 0.93
SMG1P3-201ENST00000435197 SMAD4Q13485 552 aaKnown RBP20.89■□□□□ 0.93
SMG1P3-201ENST00000435197 FAM26DQ5JW98 314 aa20.89■□□□□ 0.93
SMG1P3-201ENST00000435197 RNF20Q5VTR2 975 aa20.89■□□□□ 0.93
SMG1P3-201ENST00000435197 RNF135Q8IUD6 432 aa20.89■□□□□ 0.93
SMG1P3-201ENST00000435197 MTMR8Q96EF0 704 aa20.89■□□□□ 0.93
SMG1P3-201ENST00000435197 UPF2Q9HAU5 1272 aaKnown RBP20.89■□□□□ 0.93
SMG1P3-201ENST00000435197 NOP56O00567 594 aaKnown RBP20.88■□□□□ 0.93
SMG1P3-201ENST00000435197 ZBTB5O15062 677 aa20.88■□□□□ 0.93
SMG1P3-201ENST00000435197 SEC24BO95487 1268 aa20.88■□□□□ 0.93
SMG1P3-201ENST00000435197 GNAT1P11488 350 aa20.88■□□□□ 0.93
SMG1P3-201ENST00000435197 NECTIN1Q15223 517 aa20.88■□□□□ 0.93
SMG1P3-201ENST00000435197 RC3H2Q9HBD1 1191 aaKnown RBP20.88■□□□□ 0.93
SMG1P3-201ENST00000435197 ZSWIM5Q9P217 1185 aa20.88■□□□□ 0.93
SMG1P3-201ENST00000435197 KMT2EQ8IZD2 1858 aa20.88■□□□□ 0.93
SMG1P3-201ENST00000435197 TTC3P53804 2025 aa20.87■□□□□ 0.93
SMG1P3-201ENST00000435197 GTF2F1P35269 517 aaKnown RBP eCLIP20.87■□□□□ 0.93
SMG1P3-201ENST00000435197 ADAM17P78536 824 aa20.87■□□□□ 0.93
SMG1P3-201ENST00000435197 TRIM50Q86XT4 487 aa20.87■□□□□ 0.93
SMG1P3-201ENST00000435197 LMBR1Q8WVP7 490 aa20.87■□□□□ 0.93
SMG1P3-201ENST00000435197 EDAQ92838 391 aa20.87■□□□□ 0.93
SMG1P3-201ENST00000435197 CLP1Q92989 425 aaKnown RBP20.87■□□□□ 0.93
SMG1P3-201ENST00000435197 SNX27Q96L92 541 aa20.87■□□□□ 0.93
SMG1P3-201ENST00000435197 PHOX2BQ99453 314 aa20.87■□□□□ 0.93
SMG1P3-201ENST00000435197 CD207Q9UJ71 328 aa20.87■□□□□ 0.93
SMG1P3-201ENST00000435197 KLRF2D3W0D1 207 aa20.86■□□□□ 0.93
SMG1P3-201ENST00000435197 GCOM1H8Y6P7 765 aaPredicted RBP20.86■□□□□ 0.93
SMG1P3-201ENST00000435197 STXBP3O00186 592 aa20.86■□□□□ 0.93
SMG1P3-201ENST00000435197 LINC01565O15544 149 aa20.86■□□□□ 0.93
SMG1P3-201ENST00000435197 MMP1P03956 469 aa20.86■□□□□ 0.93
SMG1P3-201ENST00000435197 POLR2MP0CAP2 368 aa20.86■□□□□ 0.93
SMG1P3-201ENST00000435197 METTL7BQ6UX53 244 aa20.86■□□□□ 0.93
SMG1P3-201ENST00000435197 FCHSD1Q86WN1 690 aa20.86■□□□□ 0.93
SMG1P3-201ENST00000435197 PRSS33Q8NF86 280 aa20.86■□□□□ 0.93
SMG1P3-201ENST00000435197 GPR20Q99678 358 aa20.86■□□□□ 0.93
SMG1P3-201ENST00000435197 IGFLR1Q9H665 355 aa20.86■□□□□ 0.93
SMG1P3-201ENST00000435197 ZNF215Q9UL58 517 aaPredicted RBP20.86■□□□□ 0.93
SMG1P3-201ENST00000435197 CSPG5O95196 566 aa20.85■□□□□ 0.93
SMG1P3-201ENST00000435197 CHRNA1P02708 482 aa20.85■□□□□ 0.93
SMG1P3-201ENST00000435197 ICAM3P32942 547 aa20.85■□□□□ 0.93
SMG1P3-201ENST00000435197 HSPA4P34932 840 aa20.85■□□□□ 0.93
SMG1P3-201ENST00000435197 ARHGAP4P98171 946 aa20.85■□□□□ 0.93
SMG1P3-201ENST00000435197 NEDD9Q14511 834 aa20.85■□□□□ 0.93
SMG1P3-201ENST00000435197 GNPTABQ3T906 1256 aa20.85■□□□□ 0.93
SMG1P3-201ENST00000435197 CREB3L3Q68CJ9 461 aa20.85■□□□□ 0.93
SMG1P3-201ENST00000435197 BMP8AQ7Z5Y6 402 aa20.85■□□□□ 0.93
SMG1P3-201ENST00000435197 UBAC1Q9BSL1 405 aa20.85■□□□□ 0.93
SMG1P3-201ENST00000435197 FRMPD4Q14CM0 1322 aa20.84■□□□□ 0.93
SMG1P3-201ENST00000435197 SLC27A2O14975 620 aa20.84■□□□□ 0.93
SMG1P3-201ENST00000435197 CYP21A2P08686 494 aa20.84■□□□□ 0.93
SMG1P3-201ENST00000435197 GHRP10912 638 aa20.84■□□□□ 0.93
SMG1P3-201ENST00000435197 MRPS9P82933 396 aaKnown RBP20.84■□□□□ 0.93
SMG1P3-201ENST00000435197 SEMA3FQ13275 785 aa20.84■□□□□ 0.93
SMG1P3-201ENST00000435197 ADAM15Q13444 863 aa20.84■□□□□ 0.93
SMG1P3-201ENST00000435197 IFIT1BQ5T764 474 aaKnown RBP20.84■□□□□ 0.93
SMG1P3-201ENST00000435197 CYFIP1Q7L576 1253 aa20.84■□□□□ 0.93
SMG1P3-201ENST00000435197 HOMER1Q86YM7 354 aa20.84■□□□□ 0.93
SMG1P3-201ENST00000435197 INPP4AQ96PE3 977 aaPredicted RBP20.84■□□□□ 0.93
SMG1P3-201ENST00000435197 KRT23Q9C075 422 aa20.84■□□□□ 0.93
SMG1P3-201ENST00000435197 EHMT1Q9H9B1 1298 aa20.84■□□□□ 0.93
SMG1P3-201ENST00000435197 MAD2L2Q9UI95 211 aa20.84■□□□□ 0.93
SMG1P3-201ENST00000435197 BAZ2BQ9UIF8 2168 aaKnown RBP20.84■□□□□ 0.93
SMG1P3-201ENST00000435197 PALM3A6NDB9 673 aaPredicted RBP20.83■□□□□ 0.93
SMG1P3-201ENST00000435197 SPATA31C2B4DYI2 1134 aa20.83■□□□□ 0.93
SMG1P3-201ENST00000435197 CAMK1Q14012 370 aa20.83■□□□□ 0.93
SMG1P3-201ENST00000435197 BTG3Q14201 252 aaPredicted RBP20.83■□□□□ 0.93
SMG1P3-201ENST00000435197 SLC35G1Q2M3R5 365 aa20.83■□□□□ 0.93
SMG1P3-201ENST00000435197 UTP14CQ5TAP6 766 aaKnown RBP20.83■□□□□ 0.93
SMG1P3-201ENST00000435197 ZNF689Q96CS4 500 aaPredicted RBP20.83■□□□□ 0.93
SMG1P3-201ENST00000435197 MSLNLQ96KJ4 702 aa20.83■□□□□ 0.93
SMG1P3-201ENST00000435197 PLVAPQ9BX97 442 aa20.83■□□□□ 0.93
SMG1P3-201ENST00000435197 ALG13Q9NP73 1137 aaKnown RBP20.83■□□□□ 0.93
SMG1P3-201ENST00000435197 TELO2Q9Y4R8 837 aa20.83■□□□□ 0.93
SMG1P3-201ENST00000435197 TMEM221A6NGB7 291 aa20.82■□□□□ 0.92
SMG1P3-201ENST00000435197 M0R296 226 aa20.82■□□□□ 0.92
SMG1P3-201ENST00000435197 FIBPO43427 364 aa20.82■□□□□ 0.92
SMG1P3-201ENST00000435197 STAM2O75886 525 aa20.82■□□□□ 0.92
SMG1P3-201ENST00000435197 NDUFV1P49821 464 aa20.82■□□□□ 0.92
SMG1P3-201ENST00000435197 PTPN5P54829 565 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms