RNA–Protein interactions for RNA: ENST00000430710.7

CHD8-202, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD8, Length 7,420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-202ENST00000430710 ZNF473Q8WTR7 871 aaKnown RBP6.67□□□□□ -1.34
CHD8-202ENST00000430710 FAM89AQ96GI7 184 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 ZBED2Q9BTP6 218 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 FTOQ9C0B1 505 aaKnown RBP eCLIP6.67□□□□□ -1.34
CHD8-202ENST00000430710 COPRSQ9NQ92 184 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 NDE1Q9NXR1 346 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 DDX25Q9UHL0 483 aaKnown RBP6.67□□□□□ -1.34
CHD8-202ENST00000430710 TBX22Q9Y458 520 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 CCND1P24385 295 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 NR2F2P24468 414 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 MDH1P40925 334 aaKnown RBP6.67□□□□□ -1.34
CHD8-202ENST00000430710 PDE1BQ01064 536 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 PTK2Q05397 1052 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 NECTIN1Q15223 517 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 BSPRYQ5W0U4 402 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 CENPUQ71F23 418 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 RSPH3Q86UC2 560 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 PPM1KQ8N3J5 372 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 KCNV2Q8TDN2 545 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 RNF34Q969K3 372 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 THOC1Q96FV9 657 aaKnown RBP6.67□□□□□ -1.34
CHD8-202ENST00000430710 PLEKHF1Q96S99 279 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 NBPF3Q9H094 633 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 ST7Q9NRC1 585 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 MAD1L1Q9Y6D9 718 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 TNKSO95271 1327 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 LGALS16A8MUM7 142 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 hCG_1984214I3L0E3 225 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 WDR46O15213 610 aaKnown RBP6.67□□□□□ -1.34
CHD8-202ENST00000430710 PSMC2P35998 433 aaKnown RBP6.67□□□□□ -1.34
CHD8-202ENST00000430710 MFAP3P55082 362 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 TFAP4Q01664 338 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 MAEAQ7L5Y9 396 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 ZNF713Q8N859 430 aaPredicted RBP6.67□□□□□ -1.34
CHD8-202ENST00000430710 PAGE5Q96GU1 130 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 PGBD1Q96JS3 809 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 TTC25Q96NG3 672 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 AP1M1Q9BXS5 423 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 ETNK1Q9HBU6 452 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 USP40Q9NVE5 1235 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 SORBS3O60504 671 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 PLS3P13797 630 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 MRPS35P82673 323 aaKnown RBP6.67□□□□□ -1.34
CHD8-202ENST00000430710 CUL4BQ13620 913 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 TTBK2Q6IQ55 1244 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 PPP4R3CPQ6ZMV5 832 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 SESTD1Q86VW0 696 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 TPH2Q8IWU9 490 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 RHOT2Q8IXI1 618 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 FAM133AQ8N9E0 248 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 CATSPER1Q8NEC5 780 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 ZNF653Q96CK0 615 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 TRIM56Q9BRZ2 755 aaKnown RBP6.67□□□□□ -1.34
CHD8-202ENST00000430710 PRPF6O94906 941 aaKnown RBP6.67□□□□□ -1.34
CHD8-202ENST00000430710 ACSL3O95573 720 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 ECE1P42892 770 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 EIF4A1P60842 406 aaKnown RBP6.67□□□□□ -1.34
CHD8-202ENST00000430710 CYP27A1Q02318 531 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 C1orf146Q5VVC0 180 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 WDR75Q8IWA0 830 aaKnown RBP6.67□□□□□ -1.34
CHD8-202ENST00000430710 TNS4Q8IZW8 715 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 FMR1NBQ8N0W7 255 aaPredicted RBP6.67□□□□□ -1.34
CHD8-202ENST00000430710 CMTR1Q8N1G2 835 aaKnown RBP6.67□□□□□ -1.34
CHD8-202ENST00000430710 CCT8L2Q96SF2 557 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 CARD10Q9BWT7 1032 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 NDST4Q9H3R1 872 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 MRPL47Q9HD33 250 aaKnown RBP6.67□□□□□ -1.34
CHD8-202ENST00000430710 NUB1Q9Y5A7 615 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 ABCC10Q5T3U5 1492 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 PRDM15P57071 1507 aaPredicted RBP6.67□□□□□ -1.34
CHD8-202ENST00000430710 H0YCG3 227 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 MCF2LO15068 1137 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 GAS7O60861 476 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 CPP00450 1065 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 PYGBP11216 843 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 FSCBQ5H9T9 825 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 KSR1Q8IVT5 923 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 SLC17A8Q8NDX2 589 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 ZNF277Q9NRM2 450 aaPredicted RBP6.67□□□□□ -1.34
CHD8-202ENST00000430710 PNMA2Q9UL42 364 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 GINS2Q9Y248 185 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 SHROOM2Q13796 1616 aa6.67□□□□□ -1.34
CHD8-202ENST00000430710 BCORL1Q5H9F3 1711 aa6.66□□□□□ -1.34
CHD8-202ENST00000430710 RASA4BC9J798 803 aa6.66□□□□□ -1.34
CHD8-202ENST00000430710 RASA4O43374 803 aa6.66□□□□□ -1.34
CHD8-202ENST00000430710 SRGAP2O75044 1071 aa6.66□□□□□ -1.34
CHD8-202ENST00000430710 PALMO75781 387 aa6.66□□□□□ -1.34
CHD8-202ENST00000430710 LARGE1O95461 756 aa6.66□□□□□ -1.34
CHD8-202ENST00000430710 GAP43P17677 238 aa6.66□□□□□ -1.34
CHD8-202ENST00000430710 HNRNPH1P31943 449 aaKnown RBP6.66□□□□□ -1.34
CHD8-202ENST00000430710 SLC1A4P43007 532 aa6.66□□□□□ -1.34
CHD8-202ENST00000430710 ARMCX5Q6P1M9 558 aa6.66□□□□□ -1.34
CHD8-202ENST00000430710 ALDH8A1Q9H2A2 487 aaPredicted RBP6.66□□□□□ -1.34
CHD8-202ENST00000430710 PALMDQ9NP74 551 aa6.66□□□□□ -1.34
CHD8-202ENST00000430710 H7C0C1 242 aa6.66□□□□□ -1.34
CHD8-202ENST00000430710 ATP5OP48047 213 aa6.66□□□□□ -1.34
CHD8-202ENST00000430710 KPNA2P52292 529 aaKnown RBP6.66□□□□□ -1.34
CHD8-202ENST00000430710 PMS2P54278 862 aa6.66□□□□□ -1.34
CHD8-202ENST00000430710 UBE3CQ15386 1083 aa6.66□□□□□ -1.34
CHD8-202ENST00000430710 TEDDM1Q5T9Z0 273 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms