RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 ORC3Q9UBD5 711 aaPredicted RBP16.94■□□□□ 0.3
RTN4-210ENST00000427710 PCDHA4Q9UN74 947 aa16.94■□□□□ 0.3
RTN4-210ENST00000427710 IGLV3-22A0A075B6J6 115 aa16.93■□□□□ 0.3
RTN4-210ENST00000427710 JAK2O60674 1132 aa16.93■□□□□ 0.3
RTN4-210ENST00000427710 CDKL5O76039 1030 aa16.93■□□□□ 0.3
RTN4-210ENST00000427710 CYP3A4P08684 503 aa16.93■□□□□ 0.3
RTN4-210ENST00000427710 Q7L0L9 218 aa16.93■□□□□ 0.3
RTN4-210ENST00000427710 TEX2Q8IWB9 1127 aa16.93■□□□□ 0.3
RTN4-210ENST00000427710 BLIDQ8IZY5 108 aa16.93■□□□□ 0.3
RTN4-210ENST00000427710 SEPT1Q8WYJ6 367 aa16.93■□□□□ 0.3
RTN4-210ENST00000427710 PCYT2Q99447 389 aa16.93■□□□□ 0.3
RTN4-210ENST00000427710 SDF4Q9BRK5 362 aa16.93■□□□□ 0.3
RTN4-210ENST00000427710 RNPEPQ9H4A4 650 aa16.93■□□□□ 0.3
RTN4-210ENST00000427710 JPH1Q9HDC5 661 aaPredicted RBP16.93■□□□□ 0.3
RTN4-210ENST00000427710 SETD4Q9NVD3 440 aa16.93■□□□□ 0.3
RTN4-210ENST00000427710 SLC9A2Q9UBY0 812 aa16.93■□□□□ 0.3
RTN4-210ENST00000427710 PTPRSQ13332 1948 aa16.93■□□□□ 0.3
RTN4-210ENST00000427710 C17orf102A2RUQ5 167 aa16.92■□□□□ 0.3
RTN4-210ENST00000427710 MAFGO15525 162 aa16.92■□□□□ 0.3
RTN4-210ENST00000427710 TREHO43280 583 aa16.92■□□□□ 0.3
RTN4-210ENST00000427710 FDPSP14324 419 aaKnown RBP16.92■□□□□ 0.3
RTN4-210ENST00000427710 PRR16Q569H4 304 aa16.92■□□□□ 0.3
RTN4-210ENST00000427710 FAM109BQ6ICB4 259 aaPredicted RBP16.92■□□□□ 0.3
RTN4-210ENST00000427710 OTOP2Q7RTS6 562 aa16.92■□□□□ 0.3
RTN4-210ENST00000427710 RETREG2Q8NC44 543 aa16.92■□□□□ 0.3
RTN4-210ENST00000427710 NSUN7Q8NE18 718 aaKnown RBP16.92■□□□□ 0.3
RTN4-210ENST00000427710 NFASCO94856 1347 aa16.92■□□□□ 0.3
RTN4-210ENST00000427710 STK36Q9NRP7 1315 aa16.92■□□□□ 0.3
RTN4-210ENST00000427710 GRXCR1A8MXD5 290 aa16.91■□□□□ 0.3
RTN4-210ENST00000427710 M0R2N6 131 aa16.91■□□□□ 0.3
RTN4-210ENST00000427710 IQCF3P0C7M6 154 aa16.91■□□□□ 0.3
RTN4-210ENST00000427710 ACTR2P61160 394 aa16.91■□□□□ 0.3
RTN4-210ENST00000427710 BFSP2Q13515 415 aa16.91■□□□□ 0.3
RTN4-210ENST00000427710 TRIM71Q2Q1W2 868 aaKnown RBP16.91■□□□□ 0.3
RTN4-210ENST00000427710 NIPA1Q7RTP0 329 aa16.91■□□□□ 0.3
RTN4-210ENST00000427710 OXER1Q8TDS5 423 aa16.91■□□□□ 0.3
RTN4-210ENST00000427710 TBCKQ8TEA7 893 aa16.91■□□□□ 0.3
RTN4-210ENST00000427710 GLG1Q92896 1179 aa16.91■□□□□ 0.3
RTN4-210ENST00000427710 ATP6V0A1Q93050 837 aa16.91■□□□□ 0.3
RTN4-210ENST00000427710 GJA10Q969M2 543 aa16.91■□□□□ 0.3
RTN4-210ENST00000427710 CXXC1Q9P0U4 656 aaPredicted RBP16.91■□□□□ 0.3
RTN4-210ENST00000427710 ZNF215Q9UL58 517 aaPredicted RBP16.91■□□□□ 0.3
RTN4-210ENST00000427710 DHX15O43143 795 aaKnown RBP16.9■□□□□ 0.3
RTN4-210ENST00000427710 CCNE2O96020 404 aa16.9■□□□□ 0.3
RTN4-210ENST00000427710 FGBP02675 491 aa16.9■□□□□ 0.3
RTN4-210ENST00000427710 CKBP12277 381 aa16.9■□□□□ 0.3
RTN4-210ENST00000427710 PTK7Q13308 1070 aa16.9■□□□□ 0.3
RTN4-210ENST00000427710 MCTP2Q6DN12 878 aa16.9■□□□□ 0.3
RTN4-210ENST00000427710 PSRC1Q6PGN9 363 aaPredicted RBP16.9■□□□□ 0.3
RTN4-210ENST00000427710 CCDC83Q8IWF9 413 aa16.9■□□□□ 0.3
RTN4-210ENST00000427710 DAGLBQ8NCG7 672 aa16.9■□□□□ 0.3
RTN4-210ENST00000427710 ZBTB10Q96DT7 871 aa16.9■□□□□ 0.3
RTN4-210ENST00000427710 ZNF577Q9BSK1 485 aa16.9■□□□□ 0.3
RTN4-210ENST00000427710 PHF20Q9BVI0 1012 aa16.9■□□□□ 0.3
RTN4-210ENST00000427710 SIP14410 1827 aa16.9■□□□□ 0.3
RTN4-210ENST00000427710 MICAL3Q7RTP6 2002 aa16.89■□□□□ 0.29
RTN4-210ENST00000427710 PITPNM1O00562 1244 aa16.89■□□□□ 0.29
RTN4-210ENST00000427710 LGR5O75473 907 aa16.89■□□□□ 0.29
RTN4-210ENST00000427710 TDP2O95551 362 aa16.89■□□□□ 0.29
RTN4-210ENST00000427710 CIITAP33076 1130 aa16.89■□□□□ 0.29
RTN4-210ENST00000427710 GPNMBQ14956 572 aa16.89■□□□□ 0.29
RTN4-210ENST00000427710 INF2Q27J81 1249 aa16.89■□□□□ 0.29
RTN4-210ENST00000427710 ZNF618Q5T7W0 954 aa16.89■□□□□ 0.29
RTN4-210ENST00000427710 RPUSD2Q8IZ73 545 aaKnown RBP16.89■□□□□ 0.29
RTN4-210ENST00000427710 CAGE1Q8TC20 777 aa16.89■□□□□ 0.29
RTN4-210ENST00000427710 HERVK_113Q902F9 699 aa16.89■□□□□ 0.29
RTN4-210ENST00000427710 LENG9Q96B70 501 aa16.89■□□□□ 0.29
RTN4-210ENST00000427710 FAM161BQ96MY7 647 aa16.89■□□□□ 0.29
RTN4-210ENST00000427710 FTOQ9C0B1 505 aaKnown RBP eCLIP16.89■□□□□ 0.292e-14■□□□□ 10
RTN4-210ENST00000427710 LIMCH1Q9UPQ0 1083 aa16.89■□□□□ 0.29
RTN4-210ENST00000427710 FAM205CA6NFA0 338 aa16.88■□□□□ 0.29
RTN4-210ENST00000427710 ZBBXA8MT70 800 aa16.88■□□□□ 0.29
RTN4-210ENST00000427710 IPO5O00410 1097 aaKnown RBP16.88■□□□□ 0.29
RTN4-210ENST00000427710 SELPP16109 830 aa16.88■□□□□ 0.29
RTN4-210ENST00000427710 HOXC8P31273 242 aa16.88■□□□□ 0.29
RTN4-210ENST00000427710 THPOP40225 353 aa16.88■□□□□ 0.29
RTN4-210ENST00000427710 RBM25P49756 843 aaKnown RBP16.88■□□□□ 0.29
RTN4-210ENST00000427710 IGBP1P78318 339 aa16.88■□□□□ 0.29
RTN4-210ENST00000427710 PPFIA1Q13136 1202 aa16.88■□□□□ 0.29
RTN4-210ENST00000427710 TCTN1Q2MV58 587 aa16.88■□□□□ 0.29
RTN4-210ENST00000427710 LRRC8DQ7L1W4 858 aa16.88■□□□□ 0.29
RTN4-210ENST00000427710 SERINC5Q86VE9 423 aa16.88■□□□□ 0.29
RTN4-210ENST00000427710 CCDC155Q8N6L0 562 aa16.88■□□□□ 0.29
RTN4-210ENST00000427710 AFAP1L1Q8TED9 768 aa16.88■□□□□ 0.29
RTN4-210ENST00000427710 LMBR1Q8WVP7 490 aa16.88■□□□□ 0.29
RTN4-210ENST00000427710 SMARCAD1Q9H4L7 1026 aa16.88■□□□□ 0.29
RTN4-210ENST00000427710 MSH4O15457 936 aa16.87■□□□□ 0.29
RTN4-210ENST00000427710 NBNO60934 754 aa16.87■□□□□ 0.29
RTN4-210ENST00000427710 CTSHP09668 335 aa16.87■□□□□ 0.29
RTN4-210ENST00000427710 SETQ01105 290 aaPredicted RBP16.87■□□□□ 0.29
RTN4-210ENST00000427710 PLCB4Q15147 1175 aa16.87■□□□□ 0.29
RTN4-210ENST00000427710 EARS2Q5JPH6 523 aaKnown RBP16.87■□□□□ 0.29
RTN4-210ENST00000427710 RASIP1Q5U651 963 aa16.87■□□□□ 0.29
RTN4-210ENST00000427710 TRAF7Q6Q0C0 670 aa16.87■□□□□ 0.29
RTN4-210ENST00000427710 RUFY4Q6ZNE9 571 aa16.87■□□□□ 0.29
RTN4-210ENST00000427710 DEFB123Q8N688 67 aa16.87■□□□□ 0.29
RTN4-210ENST00000427710 TRAPPC12Q8WVT3 735 aa16.87■□□□□ 0.29
RTN4-210ENST00000427710 OSBPL7Q9BZF2 842 aa16.87■□□□□ 0.29
RTN4-210ENST00000427710 ERAP1Q9NZ08 941 aa16.87■□□□□ 0.29
RTN4-210ENST00000427710 EMSYQ7Z589 1322 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms