RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 CIITAP33076 1130 aa17.82■□□□□ 0.44
CLK3P2-201ENST00000427566 CCL23P55773 120 aa17.82■□□□□ 0.44
CLK3P2-201ENST00000427566 MFSD5Q6N075 450 aa17.82■□□□□ 0.44
CLK3P2-201ENST00000427566 METTL7BQ6UX53 244 aa17.82■□□□□ 0.44
CLK3P2-201ENST00000427566 PLA2G4DQ86XP0 818 aa17.82■□□□□ 0.44
CLK3P2-201ENST00000427566 TMEM199Q8N511 208 aa17.82■□□□□ 0.44
CLK3P2-201ENST00000427566 GIMAP8Q8ND71 665 aaPredicted RBP17.82■□□□□ 0.44
CLK3P2-201ENST00000427566 LENG9Q96B70 501 aa17.82■□□□□ 0.44
CLK3P2-201ENST00000427566 HDAC6Q9UBN7 1215 aa17.82■□□□□ 0.44
CLK3P2-201ENST00000427566 SMC3Q9UQE7 1217 aa17.82■□□□□ 0.44
CLK3P2-201ENST00000427566 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.82■□□□□ 0.44
CLK3P2-201ENST00000427566 WNT7AO00755 349 aa17.81■□□□□ 0.44
CLK3P2-201ENST00000427566 TDP2O95551 362 aa17.81■□□□□ 0.44
CLK3P2-201ENST00000427566 CSF2RAP15509 400 aa17.81■□□□□ 0.44
CLK3P2-201ENST00000427566 USP11P51784 963 aa17.81■□□□□ 0.44
CLK3P2-201ENST00000427566 PTPN11Q06124 597 aaPredicted RBP17.81■□□□□ 0.44
CLK3P2-201ENST00000427566 ITGB3BPQ13352 177 aaPredicted RBP17.81■□□□□ 0.44
CLK3P2-201ENST00000427566 SHHQ15465 462 aa17.81■□□□□ 0.44
CLK3P2-201ENST00000427566 PTGISQ16647 500 aa17.81■□□□□ 0.44
CLK3P2-201ENST00000427566 PRR16Q569H4 304 aa17.81■□□□□ 0.44
CLK3P2-201ENST00000427566 C9orf50Q5SZB4 431 aa17.81■□□□□ 0.44
CLK3P2-201ENST00000427566 SENP7Q9BQF6 1050 aa17.81■□□□□ 0.44
CLK3P2-201ENST00000427566 AGO4Q9HCK5 861 aaKnown RBP17.81■□□□□ 0.44
CLK3P2-201ENST00000427566 TANC1Q9C0D5 1861 aa17.8■□□□□ 0.44
CLK3P2-201ENST00000427566 KIF28PB7ZC32 967 aa17.8■□□□□ 0.44
CLK3P2-201ENST00000427566 F2P00734 622 aa17.8■□□□□ 0.44
CLK3P2-201ENST00000427566 LGALS2P05162 132 aa17.8■□□□□ 0.44
CLK3P2-201ENST00000427566 EPHB4P54760 987 aa17.8■□□□□ 0.44
CLK3P2-201ENST00000427566 PPIGQ13427 754 aaKnown RBP eCLIP17.8■□□□□ 0.44
CLK3P2-201ENST00000427566 GDF6Q6KF10 455 aaPredicted RBP17.8■□□□□ 0.44
CLK3P2-201ENST00000427566 HSCBQ8IWL3 235 aa17.8■□□□□ 0.44
CLK3P2-201ENST00000427566 GJA10Q969M2 543 aa17.8■□□□□ 0.44
CLK3P2-201ENST00000427566 GPR20Q99678 358 aa17.8■□□□□ 0.44
CLK3P2-201ENST00000427566 NOC4LQ9BVI4 516 aaKnown RBP17.8■□□□□ 0.44
CLK3P2-201ENST00000427566 BRMS1Q9HCU9 246 aa17.8■□□□□ 0.44
CLK3P2-201ENST00000427566 H3BRB1 525 aa17.79■□□□□ 0.44
CLK3P2-201ENST00000427566 SOX1O00570 391 aaPredicted RBP17.79■□□□□ 0.44
CLK3P2-201ENST00000427566 MAFGO15525 162 aa17.79■□□□□ 0.44
CLK3P2-201ENST00000427566 ACRP10323 421 aa17.79■□□□□ 0.44
CLK3P2-201ENST00000427566 LETM2Q2VYF4 491 aa17.79■□□□□ 0.44
CLK3P2-201ENST00000427566 NIPA1Q7RTP0 329 aa17.79■□□□□ 0.44
CLK3P2-201ENST00000427566 SCLYQ96I15 445 aa17.79■□□□□ 0.44
CLK3P2-201ENST00000427566 LRCH3Q96II8 777 aa17.79■□□□□ 0.44
CLK3P2-201ENST00000427566 C16orf70Q9BSU1 422 aa17.79■□□□□ 0.44
CLK3P2-201ENST00000427566 TUT1Q9H6E5 874 aaKnown RBP17.79■□□□□ 0.44
CLK3P2-201ENST00000427566 DDX39AO00148 427 aaKnown RBP17.78■□□□□ 0.44
CLK3P2-201ENST00000427566 SLC37A4O43826 429 aa17.78■□□□□ 0.44
CLK3P2-201ENST00000427566 HOXD8P13378 290 aaPredicted RBP17.78■□□□□ 0.44
CLK3P2-201ENST00000427566 NEK8Q86SG6 692 aa17.78■□□□□ 0.44
CLK3P2-201ENST00000427566 TRIM50Q86XT4 487 aa17.78■□□□□ 0.44
CLK3P2-201ENST00000427566 RNPC3Q96LT9 517 aaKnown RBP17.78■□□□□ 0.44
CLK3P2-201ENST00000427566 SDF4Q9BRK5 362 aa17.78■□□□□ 0.44
CLK3P2-201ENST00000427566 GTF2IRD1Q9UHL9 959 aa17.78■□□□□ 0.44
CLK3P2-201ENST00000427566 MYH9P35579 1960 aaKnown RBP17.78■□□□□ 0.44
CLK3P2-201ENST00000427566 WDR81Q562E7 1941 aa17.78■□□□□ 0.44
CLK3P2-201ENST00000427566 CYP3A7-CYP3A51PA0A087WV96 503 aa17.77■□□□□ 0.44
CLK3P2-201ENST00000427566 HAS3O00219 553 aa17.77■□□□□ 0.44
CLK3P2-201ENST00000427566 DHX15O43143 795 aaKnown RBP17.77■□□□□ 0.44
CLK3P2-201ENST00000427566 CYP3A7P24462 503 aa17.77■□□□□ 0.44
CLK3P2-201ENST00000427566 TCF7P36402 384 aaPredicted RBP17.77■□□□□ 0.44
CLK3P2-201ENST00000427566 SAFBQ15424 915 aaKnown RBP eCLIP17.77■□□□□ 0.44
CLK3P2-201ENST00000427566 RETREG2Q8NC44 543 aa17.77■□□□□ 0.44
CLK3P2-201ENST00000427566 WNT8AQ9H1J5 351 aa17.77■□□□□ 0.44
CLK3P2-201ENST00000427566 JPH1Q9HDC5 661 aaPredicted RBP17.77■□□□□ 0.44
CLK3P2-201ENST00000427566 ZNF215Q9UL58 517 aaPredicted RBP17.77■□□□□ 0.44
CLK3P2-201ENST00000427566 IPO5O00410 1097 aaKnown RBP17.76■□□□□ 0.43
CLK3P2-201ENST00000427566 MSH4O15457 936 aa17.76■□□□□ 0.43
CLK3P2-201ENST00000427566 CCNT1O60563 726 aaKnown RBP17.76■□□□□ 0.43
CLK3P2-201ENST00000427566 ZNF200P98182 395 aaPredicted RBP17.76■□□□□ 0.43
CLK3P2-201ENST00000427566 LARP1BQ659C4 914 aaKnown RBP17.76■□□□□ 0.43
CLK3P2-201ENST00000427566 SESTD1Q86VW0 696 aa17.76■□□□□ 0.43
CLK3P2-201ENST00000427566 SEPT1Q8WYJ6 367 aa17.76■□□□□ 0.43
CLK3P2-201ENST00000427566 INTS4Q96HW7 963 aaKnown RBP17.76■□□□□ 0.43
CLK3P2-201ENST00000427566 MBOAT7Q96N66 472 aa17.76■□□□□ 0.43
CLK3P2-201ENST00000427566 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.76■□□□□ 0.43
CLK3P2-201ENST00000427566 ZNF577Q9BSK1 485 aa17.76■□□□□ 0.43
CLK3P2-201ENST00000427566 FOXP1Q9H334 677 aaPredicted RBP17.76■□□□□ 0.43
CLK3P2-201ENST00000427566 SLC9A2Q9UBY0 812 aa17.76■□□□□ 0.43
CLK3P2-201ENST00000427566 GSTTP1A0A1W2PQM5 241 aa17.75■□□□□ 0.43
CLK3P2-201ENST00000427566 SETQ01105 290 aaPredicted RBP17.75■□□□□ 0.43
CLK3P2-201ENST00000427566 BFSP2Q13515 415 aa17.75■□□□□ 0.43
CLK3P2-201ENST00000427566 LRIT3Q3SXY7 679 aa17.75■□□□□ 0.43
CLK3P2-201ENST00000427566 Q4G0T1 1027 aa17.75■□□□□ 0.43
CLK3P2-201ENST00000427566 DEFB128Q7Z7B8 93 aa17.75■□□□□ 0.43
CLK3P2-201ENST00000427566 CCDC155Q8N6L0 562 aa17.75■□□□□ 0.43
CLK3P2-201ENST00000427566 SPRYD3Q8NCJ5 442 aa17.75■□□□□ 0.43
CLK3P2-201ENST00000427566 GLG1Q92896 1179 aa17.75■□□□□ 0.43
CLK3P2-201ENST00000427566 IL23AQ9NPF7 189 aa17.75■□□□□ 0.43
CLK3P2-201ENST00000427566 DDX25Q9UHL0 483 aaKnown RBP17.75■□□□□ 0.43
CLK3P2-201ENST00000427566 KIF3AQ9Y496 699 aa17.75■□□□□ 0.43
CLK3P2-201ENST00000427566 GBF1Q92538 1859 aa17.75■□□□□ 0.43
CLK3P2-201ENST00000427566 NFASCO94856 1347 aa17.75■□□□□ 0.43
CLK3P2-201ENST00000427566 C17orf102A2RUQ5 167 aa17.75■□□□□ 0.43
CLK3P2-201ENST00000427566 CCNE2O96020 404 aa17.75■□□□□ 0.43
CLK3P2-201ENST00000427566 SMIM10L2AP0DMW4 78 aa17.75■□□□□ 0.43
CLK3P2-201ENST00000427566 SMIM10L2BP0DMW5 78 aa17.75■□□□□ 0.43
CLK3P2-201ENST00000427566 ATP2B1P20020 1258 aa17.75■□□□□ 0.43
CLK3P2-201ENST00000427566 U2AF2P26368 475 aaKnown RBP eCLIP17.75■□□□□ 0.43
CLK3P2-201ENST00000427566 MARK3P27448 753 aa17.75■□□□□ 0.43
CLK3P2-201ENST00000427566 MCTP1Q6DN14 999 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms