RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 TEX2Q8IWB9 1127 aa15.53■□□□□ 0.08
SNX3-204ENST00000426155 VWCEQ96DN2 955 aa15.53■□□□□ 0.08
SNX3-204ENST00000426155 C22orf23Q9BZE7 217 aa15.53■□□□□ 0.08
SNX3-204ENST00000426155 TUT1Q9H6E5 874 aaKnown RBP15.53■□□□□ 0.08
SNX3-204ENST00000426155 AGO4Q9HCK5 861 aaKnown RBP15.53■□□□□ 0.08
SNX3-204ENST00000426155 SH3GLB2Q9NR46 395 aa15.53■□□□□ 0.08
SNX3-204ENST00000426155 DDX39AO00148 427 aaKnown RBP15.52■□□□□ 0.08
SNX3-204ENST00000426155 MEIS1O00470 390 aa15.52■□□□□ 0.08
SNX3-204ENST00000426155 JAK2O60674 1132 aa15.52■□□□□ 0.08
SNX3-204ENST00000426155 CDKL5O76039 1030 aa15.52■□□□□ 0.08
SNX3-204ENST00000426155 SLC34A2O95436 690 aa15.52■□□□□ 0.08
SNX3-204ENST00000426155 SMIM10L2AP0DMW4 78 aa15.52■□□□□ 0.08
SNX3-204ENST00000426155 SMIM10L2BP0DMW5 78 aa15.52■□□□□ 0.08
SNX3-204ENST00000426155 MARK3P27448 753 aa15.52■□□□□ 0.08
SNX3-204ENST00000426155 FOSBP53539 338 aa15.52■□□□□ 0.08
SNX3-204ENST00000426155 PPIGQ13427 754 aaKnown RBP eCLIP15.52■□□□□ 0.08
SNX3-204ENST00000426155 TMEM240Q5SV17 173 aa15.52■□□□□ 0.08
SNX3-204ENST00000426155 PLA2G4DQ86XP0 818 aa15.52■□□□□ 0.08
SNX3-204ENST00000426155 GIMAP8Q8ND71 665 aaPredicted RBP15.52■□□□□ 0.08
SNX3-204ENST00000426155 BICD2Q8TD16 824 aa15.52■□□□□ 0.08
SNX3-204ENST00000426155 RNPC3Q96LT9 517 aaKnown RBP15.52■□□□□ 0.08
SNX3-204ENST00000426155 JPH1Q9HDC5 661 aaPredicted RBP15.52■□□□□ 0.08
SNX3-204ENST00000426155 PCDHA4Q9UN74 947 aa15.52■□□□□ 0.08
SNX3-204ENST00000426155 M0R2N6 131 aa15.51■□□□□ 0.07
SNX3-204ENST00000426155 CYP3A4P08684 503 aa15.51■□□□□ 0.07
SNX3-204ENST00000426155 FDPSP14324 419 aaKnown RBP15.51■□□□□ 0.07
SNX3-204ENST00000426155 FAM109BQ6ICB4 259 aaPredicted RBP15.51■□□□□ 0.07
SNX3-204ENST00000426155 ZNF365Q70YC5 407 aa15.51■□□□□ 0.07
SNX3-204ENST00000426155 DEFB128Q7Z7B8 93 aa15.51■□□□□ 0.07
SNX3-204ENST00000426155 NSUN7Q8NE18 718 aaKnown RBP15.51■□□□□ 0.07
SNX3-204ENST00000426155 RNPEPQ9H4A4 650 aa15.51■□□□□ 0.07
SNX3-204ENST00000426155 IL23AQ9NPF7 189 aa15.51■□□□□ 0.07
SNX3-204ENST00000426155 ORC3Q9UBD5 711 aaPredicted RBP15.51■□□□□ 0.07
SNX3-204ENST00000426155 SLC9A2Q9UBY0 812 aa15.51■□□□□ 0.07
SNX3-204ENST00000426155 NFASCO94856 1347 aa15.5■□□□□ 0.07
SNX3-204ENST00000426155 MYH9P35579 1960 aaKnown RBP15.5■□□□□ 0.07
SNX3-204ENST00000426155 MAFGO15525 162 aa15.5■□□□□ 0.07
SNX3-204ENST00000426155 CCNE2O96020 404 aa15.5■□□□□ 0.07
SNX3-204ENST00000426155 ACTR2P61160 394 aa15.5■□□□□ 0.07
SNX3-204ENST00000426155 PRR16Q569H4 304 aa15.5■□□□□ 0.07
SNX3-204ENST00000426155 Q7L0L9 218 aa15.5■□□□□ 0.07
SNX3-204ENST00000426155 BLIDQ8IZY5 108 aa15.5■□□□□ 0.07
SNX3-204ENST00000426155 DAGLBQ8NCG7 672 aa15.5■□□□□ 0.07
SNX3-204ENST00000426155 OXER1Q8TDS5 423 aa15.5■□□□□ 0.07
SNX3-204ENST00000426155 TBCKQ8TEA7 893 aa15.5■□□□□ 0.07
SNX3-204ENST00000426155 SEPT1Q8WYJ6 367 aa15.5■□□□□ 0.07
SNX3-204ENST00000426155 LENG9Q96B70 501 aa15.5■□□□□ 0.07
SNX3-204ENST00000426155 PCYT2Q99447 389 aa15.5■□□□□ 0.07
SNX3-204ENST00000426155 SDF4Q9BRK5 362 aa15.5■□□□□ 0.07
SNX3-204ENST00000426155 PHF20Q9BVI0 1012 aa15.5■□□□□ 0.07
SNX3-204ENST00000426155 SETD4Q9NVD3 440 aa15.5■□□□□ 0.07
SNX3-204ENST00000426155 CDH23Q9H251 3354 aa15.5■□□□□ 0.07
SNX3-204ENST00000426155 C17orf102A2RUQ5 167 aa15.49■□□□□ 0.07
SNX3-204ENST00000426155 TREHO43280 583 aa15.49■□□□□ 0.07
SNX3-204ENST00000426155 IQCF3P0C7M6 154 aa15.49■□□□□ 0.07
SNX3-204ENST00000426155 HOXC8P31273 242 aa15.49■□□□□ 0.07
SNX3-204ENST00000426155 RBM25P49756 843 aaKnown RBP15.49■□□□□ 0.07
SNX3-204ENST00000426155 TRIM71Q2Q1W2 868 aaKnown RBP15.49■□□□□ 0.07
SNX3-204ENST00000426155 MCTP2Q6DN12 878 aa15.49■□□□□ 0.07
SNX3-204ENST00000426155 PSRC1Q6PGN9 363 aaPredicted RBP15.49■□□□□ 0.07
SNX3-204ENST00000426155 NIPA1Q7RTP0 329 aa15.49■□□□□ 0.07
SNX3-204ENST00000426155 OTOP2Q7RTS6 562 aa15.49■□□□□ 0.07
SNX3-204ENST00000426155 CCDC83Q8IWF9 413 aa15.49■□□□□ 0.07
SNX3-204ENST00000426155 GJA10Q969M2 543 aa15.49■□□□□ 0.07
SNX3-204ENST00000426155 ZBTB10Q96DT7 871 aa15.49■□□□□ 0.07
SNX3-204ENST00000426155 ZNF577Q9BSK1 485 aa15.49■□□□□ 0.07
SNX3-204ENST00000426155 CXXC1Q9P0U4 656 aaPredicted RBP15.49■□□□□ 0.07
SNX3-204ENST00000426155 ZNF215Q9UL58 517 aaPredicted RBP15.49■□□□□ 0.07
SNX3-204ENST00000426155 EMSYQ7Z589 1322 aa15.48■□□□□ 0.07
SNX3-204ENST00000426155 FAM205CA6NFA0 338 aa15.48■□□□□ 0.07
SNX3-204ENST00000426155 IPO5O00410 1097 aaKnown RBP15.48■□□□□ 0.07
SNX3-204ENST00000426155 DHX15O43143 795 aaKnown RBP15.48■□□□□ 0.07
SNX3-204ENST00000426155 TDP2O95551 362 aa15.48■□□□□ 0.07
SNX3-204ENST00000426155 CKBP12277 381 aa15.48■□□□□ 0.07
SNX3-204ENST00000426155 CIITAP33076 1130 aa15.48■□□□□ 0.07
SNX3-204ENST00000426155 PTK7Q13308 1070 aa15.48■□□□□ 0.07
SNX3-204ENST00000426155 BFSP2Q13515 415 aa15.48■□□□□ 0.07
SNX3-204ENST00000426155 GPNMBQ14956 572 aa15.48■□□□□ 0.07
SNX3-204ENST00000426155 LMBR1Q8WVP7 490 aa15.48■□□□□ 0.07
SNX3-204ENST00000426155 GLG1Q92896 1179 aa15.48■□□□□ 0.07
SNX3-204ENST00000426155 ATP6V0A1Q93050 837 aa15.48■□□□□ 0.07
SNX3-204ENST00000426155 LOXHD1Q8IVV2 1947 aa15.48■□□□□ 0.07
SNX3-204ENST00000426155 GRXCR1A8MXD5 290 aa15.47■□□□□ 0.07
SNX3-204ENST00000426155 SETQ01105 290 aaPredicted RBP15.47■□□□□ 0.07
SNX3-204ENST00000426155 INF2Q27J81 1249 aa15.47■□□□□ 0.07
SNX3-204ENST00000426155 EARS2Q5JPH6 523 aaKnown RBP15.47■□□□□ 0.07
SNX3-204ENST00000426155 ZNF618Q5T7W0 954 aa15.47■□□□□ 0.07
SNX3-204ENST00000426155 RASIP1Q5U651 963 aa15.47■□□□□ 0.07
SNX3-204ENST00000426155 TRAF7Q6Q0C0 670 aa15.47■□□□□ 0.07
SNX3-204ENST00000426155 LRRC8DQ7L1W4 858 aa15.47■□□□□ 0.07
SNX3-204ENST00000426155 SERINC5Q86VE9 423 aa15.47■□□□□ 0.07
SNX3-204ENST00000426155 CCDC155Q8N6L0 562 aa15.47■□□□□ 0.07
SNX3-204ENST00000426155 RETREG2Q8NC44 543 aa15.47■□□□□ 0.07
SNX3-204ENST00000426155 CAGE1Q8TC20 777 aa15.47■□□□□ 0.07
SNX3-204ENST00000426155 LIMCH1Q9UPQ0 1083 aa15.47■□□□□ 0.07
SNX3-204ENST00000426155 MSH4O15457 936 aa15.46■□□□□ 0.07
SNX3-204ENST00000426155 LGR5O75473 907 aa15.46■□□□□ 0.07
SNX3-204ENST00000426155 FGBP02675 491 aa15.46■□□□□ 0.07
SNX3-204ENST00000426155 SELPP16109 830 aa15.46■□□□□ 0.07
SNX3-204ENST00000426155 RBL2Q08999 1139 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms