RNA–Protein interactions for RNA: ENST00000419964.1

EPHA4-205, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 552 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-205ENST00000419964 TLR6Q9Y2C9 796 aa8.35□□□□□ -1.07
EPHA4-205ENST00000419964 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.35□□□□□ -1.07
EPHA4-205ENST00000419964 ATP6V0A2Q9Y487 856 aa8.35□□□□□ -1.07
EPHA4-205ENST00000419964 CACNA1SQ13698 1873 aa8.34□□□□□ -1.07
EPHA4-205ENST00000419964 NEDD4P46934 1319 aa8.34□□□□□ -1.07
EPHA4-205ENST00000419964 COL1A1P02452 1464 aaPredicted RBP8.34□□□□□ -1.07
EPHA4-205ENST00000419964 B4E1Z4 1266 aa8.34□□□□□ -1.07
EPHA4-205ENST00000419964 ORC4O43929 436 aa8.34□□□□□ -1.07
EPHA4-205ENST00000419964 JAK2O60674 1132 aa8.34□□□□□ -1.07
EPHA4-205ENST00000419964 CAVIN2O95810 425 aa8.34□□□□□ -1.07
EPHA4-205ENST00000419964 IARSP41252 1262 aaKnown RBP8.34□□□□□ -1.07
EPHA4-205ENST00000419964 LMNB2Q03252 620 aa8.34□□□□□ -1.07
EPHA4-205ENST00000419964 SSRP1Q08945 709 aaKnown RBP8.34□□□□□ -1.07
EPHA4-205ENST00000419964 RESTQ13127 1097 aa8.34□□□□□ -1.07
EPHA4-205ENST00000419964 SAFBQ15424 915 aaKnown RBP eCLIP8.34□□□□□ -1.07
EPHA4-205ENST00000419964 MAP1SQ66K74 1059 aaPredicted RBP8.34□□□□□ -1.07
EPHA4-205ENST00000419964 CATIPQ7Z7H3 387 aa8.34□□□□□ -1.07
EPHA4-205ENST00000419964 AMIGO3Q86WK7 504 aa8.34□□□□□ -1.07
EPHA4-205ENST00000419964 FBXO18Q8NFZ0 1043 aa8.34□□□□□ -1.07
EPHA4-205ENST00000419964 DDX11Q96FC9 970 aa8.34□□□□□ -1.07
EPHA4-205ENST00000419964 MASTLQ96GX5 879 aa8.34□□□□□ -1.07
EPHA4-205ENST00000419964 RHOVQ96L33 236 aa8.34□□□□□ -1.07
EPHA4-205ENST00000419964 MIR1-1HGQ9H1L0 117 aa8.34□□□□□ -1.07
EPHA4-205ENST00000419964 LY9Q9HBG7 655 aa8.34□□□□□ -1.07
EPHA4-205ENST00000419964 DDX19AQ9NUU7 478 aaKnown RBP8.34□□□□□ -1.07
EPHA4-205ENST00000419964 ZSWIM5Q9P217 1185 aa8.34□□□□□ -1.07
EPHA4-205ENST00000419964 ORC3Q9UBD5 711 aaPredicted RBP8.34□□□□□ -1.07
EPHA4-205ENST00000419964 PCDHGB7Q9Y5F8 929 aa8.34□□□□□ -1.07
EPHA4-205ENST00000419964 LRRC37AA6NMS7 1700 aa8.34□□□□□ -1.07
EPHA4-205ENST00000419964 FAM205AQ6ZU69 1335 aa8.33□□□□□ -1.08
EPHA4-205ENST00000419964 CTAGE5O15320 804 aa8.33□□□□□ -1.08
EPHA4-205ENST00000419964 DDAH1O94760 285 aa8.33□□□□□ -1.08
EPHA4-205ENST00000419964 CTDNEP1O95476 244 aa8.33□□□□□ -1.08
EPHA4-205ENST00000419964 IFNAR1P17181 557 aa8.33□□□□□ -1.08
EPHA4-205ENST00000419964 TFE3P19532 575 aaPredicted RBP8.33□□□□□ -1.08
EPHA4-205ENST00000419964 COL8A1P27658 744 aa8.33□□□□□ -1.08
EPHA4-205ENST00000419964 EIF4A3P38919 411 aaKnown RBP8.33□□□□□ -1.08
EPHA4-205ENST00000419964 NASPP49321 788 aaPredicted RBP8.33□□□□□ -1.08
EPHA4-205ENST00000419964 GPSM2P81274 684 aa8.33□□□□□ -1.08
EPHA4-205ENST00000419964 AKAP17AQ02040 695 aaKnown RBP8.33□□□□□ -1.08
EPHA4-205ENST00000419964 DDR1Q08345 913 aa8.33□□□□□ -1.08
EPHA4-205ENST00000419964 RAD51AP2Q09MP3 1159 aa8.33□□□□□ -1.08
EPHA4-205ENST00000419964 CAMK2GQ13555 558 aaPredicted RBP8.33□□□□□ -1.08
EPHA4-205ENST00000419964 GNL2Q13823 731 aaKnown RBP8.33□□□□□ -1.08
EPHA4-205ENST00000419964 GRIK4Q16099 956 aa8.33□□□□□ -1.08
EPHA4-205ENST00000419964 RASIP1Q5U651 963 aa8.33□□□□□ -1.08
EPHA4-205ENST00000419964 SMIM5Q71RC9 77 aa8.33□□□□□ -1.08
EPHA4-205ENST00000419964 CHST3Q7LGC8 479 aa8.33□□□□□ -1.08
EPHA4-205ENST00000419964 CCDC84Q86UT8 332 aaPredicted RBP8.33□□□□□ -1.08
EPHA4-205ENST00000419964 TRIM42Q8IWZ5 723 aa8.33□□□□□ -1.08
EPHA4-205ENST00000419964 FAM177A1Q8N128 213 aaPredicted RBP8.33□□□□□ -1.08
EPHA4-205ENST00000419964 JMYQ8N9B5 988 aa8.33□□□□□ -1.08
EPHA4-205ENST00000419964 TBC1D16Q8TBP0 767 aa8.33□□□□□ -1.08
EPHA4-205ENST00000419964 GRIN3AQ8TCU5 1115 aa8.33□□□□□ -1.08
EPHA4-205ENST00000419964 KCNG4Q8TDN1 519 aa8.33□□□□□ -1.08
EPHA4-205ENST00000419964 UBASH3BQ8TF42 649 aa8.33□□□□□ -1.08
EPHA4-205ENST00000419964 MAP3K14Q99558 947 aa8.33□□□□□ -1.08
EPHA4-205ENST00000419964 ZC3H12CQ9C0D7 883 aaKnown RBP8.33□□□□□ -1.08
EPHA4-205ENST00000419964 TSPY26PQ9H489 355 aa8.33□□□□□ -1.08
EPHA4-205ENST00000419964 CD209Q9NNX6 404 aa8.33□□□□□ -1.08
EPHA4-205ENST00000419964 STK32BQ9NY57 414 aa8.33□□□□□ -1.08
EPHA4-205ENST00000419964 CHD4Q14839 1912 aa8.33□□□□□ -1.08
EPHA4-205ENST00000419964 MROH7-TTC4A0A0A0MT08 1334 aa8.32□□□□□ -1.08
EPHA4-205ENST00000419964 QSER1Q2KHR3 1735 aa8.32□□□□□ -1.08
EPHA4-205ENST00000419964 H0YIN7 160 aa8.32□□□□□ -1.08
EPHA4-205ENST00000419964 PRKAB2O43741 272 aa8.32□□□□□ -1.08
EPHA4-205ENST00000419964 DEXIO95424 95 aa8.32□□□□□ -1.08
EPHA4-205ENST00000419964 YEATS4O95619 227 aa8.32□□□□□ -1.08
EPHA4-205ENST00000419964 ECEL1O95672 775 aa8.32□□□□□ -1.08
EPHA4-205ENST00000419964 PF4P02776 101 aa8.32□□□□□ -1.08
EPHA4-205ENST00000419964 SRGNP10124 158 aa8.32□□□□□ -1.08
EPHA4-205ENST00000419964 KIF5BP33176 963 aa8.32□□□□□ -1.08
EPHA4-205ENST00000419964 RACK1P63244 317 aaKnown RBP8.32□□□□□ -1.08
EPHA4-205ENST00000419964 NRG1Q02297 640 aaPredicted RBP8.32□□□□□ -1.08
EPHA4-205ENST00000419964 CCDC173Q0VFZ6 552 aa8.32□□□□□ -1.08
EPHA4-205ENST00000419964 UVSSAQ2YD98 709 aa8.32□□□□□ -1.08
EPHA4-205ENST00000419964 RRP12Q5JTH9 1297 aaKnown RBP8.32□□□□□ -1.08
EPHA4-205ENST00000419964 EXOSC6Q5RKV6 272 aaKnown RBP8.32□□□□□ -1.08
EPHA4-205ENST00000419964 IFIT1BQ5T764 474 aaKnown RBP8.32□□□□□ -1.08
EPHA4-205ENST00000419964 STYK1Q6J9G0 422 aa8.32□□□□□ -1.08
EPHA4-205ENST00000419964 CTR9Q6PD62 1173 aa8.32□□□□□ -1.08
EPHA4-205ENST00000419964 ACAD11Q709F0 780 aa8.32□□□□□ -1.08
EPHA4-205ENST00000419964 CYB5R4Q7L1T6 521 aa8.32□□□□□ -1.08
EPHA4-205ENST00000419964 FERMT3Q86UX7 667 aa8.32□□□□□ -1.08
EPHA4-205ENST00000419964 MICU3Q86XE3 530 aa8.32□□□□□ -1.08
EPHA4-205ENST00000419964 COL23A1Q86Y22 540 aaPredicted RBP8.32□□□□□ -1.08
EPHA4-205ENST00000419964 TMEM130Q8N3G9 435 aa8.32□□□□□ -1.08
EPHA4-205ENST00000419964 SUPT20HQ8NEM7 779 aa8.32□□□□□ -1.08
EPHA4-205ENST00000419964 SDR42E1Q8WUS8 393 aa8.32□□□□□ -1.08
EPHA4-205ENST00000419964 LEO1Q8WVC0 666 aaPredicted RBP8.32□□□□□ -1.08
EPHA4-205ENST00000419964 LENG1Q96BZ8 264 aaPredicted RBP8.32□□□□□ -1.08
EPHA4-205ENST00000419964 RUSC1Q9BVN2 902 aa8.32□□□□□ -1.08
EPHA4-205ENST00000419964 CCDC86Q9H6F5 360 aaKnown RBP8.32□□□□□ -1.08
EPHA4-205ENST00000419964 NCOA5Q9HCD5 579 aaKnown RBP8.32□□□□□ -1.08
EPHA4-205ENST00000419964 DCP1AQ9NPI6 582 aaPredicted RBP8.32□□□□□ -1.08
EPHA4-205ENST00000419964 AATFQ9NY61 560 aaKnown RBP eCLIP8.32□□□□□ -1.08
EPHA4-205ENST00000419964 RTEL1Q9NZ71 1219 aa8.32□□□□□ -1.08
EPHA4-205ENST00000419964 RCOR1Q9UKL0 485 aa8.32□□□□□ -1.08
EPHA4-205ENST00000419964 COL4A1P02462 1669 aa8.32□□□□□ -1.08
EPHA4-205ENST00000419964 ROBO3Q96MS0 1386 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms