RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 NOP56O00567 594 aaKnown RBP14.9□□□□□ -0.02
LINC00339-202ENST00000416769 IFIT3O14879 490 aaKnown RBP14.9□□□□□ -0.02
LINC00339-202ENST00000416769 GRM6O15303 877 aa14.9□□□□□ -0.02
LINC00339-202ENST00000416769 GHRP10912 638 aa14.9□□□□□ -0.02
LINC00339-202ENST00000416769 LTBRP36941 435 aa14.9□□□□□ -0.02
LINC00339-202ENST00000416769 ARHGAP4P98171 946 aa14.9□□□□□ -0.02
LINC00339-202ENST00000416769 TROAPQ12815 778 aa14.9□□□□□ -0.02
LINC00339-202ENST00000416769 KCNV1Q6PIU1 500 aa14.9□□□□□ -0.02
LINC00339-202ENST00000416769 METTL7BQ6UX53 244 aa14.9□□□□□ -0.02
LINC00339-202ENST00000416769 UIMC1Q96RL1 719 aa14.9□□□□□ -0.02
LINC00339-202ENST00000416769 PKD2L1Q9P0L9 805 aa14.9□□□□□ -0.02
LINC00339-202ENST00000416769 CTNNA3Q9UI47 895 aa14.9□□□□□ -0.02
LINC00339-202ENST00000416769 RALGAPA2Q2PPJ7 1873 aa14.9□□□□□ -0.02
LINC00339-202ENST00000416769 ZNF318Q5VUA4 2279 aa14.9□□□□□ -0.02
LINC00339-202ENST00000416769 KIAA1671Q9BY89 1806 aa14.89□□□□□ -0.03
LINC00339-202ENST00000416769 PNMA6FA0A0J9YX94 578 aa14.89□□□□□ -0.03
LINC00339-202ENST00000416769 ATP9AO75110 1047 aa14.89□□□□□ -0.03
LINC00339-202ENST00000416769 TGFB3P10600 412 aa14.89□□□□□ -0.03
LINC00339-202ENST00000416769 MARK3P27448 753 aa14.89□□□□□ -0.03
LINC00339-202ENST00000416769 ICAM3P32942 547 aa14.89□□□□□ -0.03
LINC00339-202ENST00000416769 RAB11FIP4Q86YS3 637 aa14.89□□□□□ -0.03
LINC00339-202ENST00000416769 CMTR1Q8N1G2 835 aaKnown RBP14.89□□□□□ -0.03
LINC00339-202ENST00000416769 LINC01599Q8WXQ3 324 aa14.89□□□□□ -0.03
LINC00339-202ENST00000416769 CLDND1Q9NY35 253 aa14.89□□□□□ -0.03
LINC00339-202ENST00000416769 TECTAO75443 2155 aa14.88□□□□□ -0.03
LINC00339-202ENST00000416769 hCG_1642624A0A1W2PR95 340 aa14.88□□□□□ -0.03
LINC00339-202ENST00000416769 POTEB3A0JP26 581 aa14.88□□□□□ -0.03
LINC00339-202ENST00000416769 LINC01565O15544 149 aa14.88□□□□□ -0.03
LINC00339-202ENST00000416769 CTNNB1P35222 781 aa14.88□□□□□ -0.03
LINC00339-202ENST00000416769 ZP2Q05996 745 aa14.88□□□□□ -0.03
LINC00339-202ENST00000416769 LPIN1Q14693 890 aa14.88□□□□□ -0.03
LINC00339-202ENST00000416769 COL19A1Q14993 1142 aa14.88□□□□□ -0.03
LINC00339-202ENST00000416769 TIGD5Q53EQ6 642 aa14.88□□□□□ -0.03
LINC00339-202ENST00000416769 POTEBQ6S5H4 581 aa14.88□□□□□ -0.03
LINC00339-202ENST00000416769 RPAINQ86UA6 219 aa14.88□□□□□ -0.03
LINC00339-202ENST00000416769 ALYREFQ86V81 257 aaKnown RBP14.88□□□□□ -0.03
LINC00339-202ENST00000416769 PABPC5Q96DU9 382 aaKnown RBP14.88□□□□□ -0.03
LINC00339-202ENST00000416769 RC3H2Q9HBD1 1191 aaKnown RBP14.88□□□□□ -0.03
LINC00339-202ENST00000416769 MAP3K20Q9NYL2 800 aaKnown RBP14.88□□□□□ -0.03
LINC00339-202ENST00000416769 TTC3P53804 2025 aa14.88□□□□□ -0.03
LINC00339-202ENST00000416769 LOXHD1Q8IVV2 1947 aa14.88□□□□□ -0.03
LINC00339-202ENST00000416769 WDFY4Q6ZS81 3184 aa14.87□□□□□ -0.03
LINC00339-202ENST00000416769 E7EWF7 191 aa14.87□□□□□ -0.03
LINC00339-202ENST00000416769 MEIS2O14770 477 aa14.87□□□□□ -0.03
LINC00339-202ENST00000416769 FIBPO43427 364 aa14.87□□□□□ -0.03
LINC00339-202ENST00000416769 PLEKHA8P1O95397 391 aa14.87□□□□□ -0.03
LINC00339-202ENST00000416769 RXRAP19793 462 aa14.87□□□□□ -0.03
LINC00339-202ENST00000416769 CHMLP26374 656 aa14.87□□□□□ -0.03
LINC00339-202ENST00000416769 NT5C2P49902 561 aa14.87□□□□□ -0.03
LINC00339-202ENST00000416769 MGAT3Q09327 533 aa14.87□□□□□ -0.03
LINC00339-202ENST00000416769 HYAL1Q12794 435 aa14.87□□□□□ -0.03
LINC00339-202ENST00000416769 WTAPQ15007 396 aa14.87□□□□□ -0.03
LINC00339-202ENST00000416769 PTPROQ16827 1216 aa14.87□□□□□ -0.03
LINC00339-202ENST00000416769 FAM26DQ5JW98 314 aa14.87□□□□□ -0.03
LINC00339-202ENST00000416769 USP26Q9BXU7 913 aa14.87□□□□□ -0.03
LINC00339-202ENST00000416769 NSUN3Q9H649 340 aaKnown RBP14.87□□□□□ -0.03
LINC00339-202ENST00000416769 PCDHGC5Q9Y5F6 944 aa14.87□□□□□ -0.03
LINC00339-202ENST00000416769 TRIOO75962 3097 aa14.87□□□□□ -0.03
LINC00339-202ENST00000416769 GSTTP1A0A1W2PQM5 241 aa14.86□□□□□ -0.03
LINC00339-202ENST00000416769 PRR33A8MZF0 331 aa14.86□□□□□ -0.03
LINC00339-202ENST00000416769 TBX10O75333 385 aa14.86□□□□□ -0.03
LINC00339-202ENST00000416769 ITGB5P18084 799 aa14.86□□□□□ -0.03
LINC00339-202ENST00000416769 GATMP50440 423 aa14.86□□□□□ -0.03
LINC00339-202ENST00000416769 CAMK1Q14012 370 aa14.86□□□□□ -0.03
LINC00339-202ENST00000416769 NEDD9Q14511 834 aa14.86□□□□□ -0.03
LINC00339-202ENST00000416769 UBE2SQ16763 222 aa14.86□□□□□ -0.03
LINC00339-202ENST00000416769 MARCH8Q5T0T0 291 aa14.86□□□□□ -0.03
LINC00339-202ENST00000416769 MB21D2Q8IYB1 491 aaPredicted RBP14.86□□□□□ -0.03
LINC00339-202ENST00000416769 IGDCC4Q8TDY8 1250 aa14.86□□□□□ -0.03
LINC00339-202ENST00000416769 IL17RAQ96F46 866 aa14.86□□□□□ -0.03
LINC00339-202ENST00000416769 EHMT1Q9H9B1 1298 aa14.86□□□□□ -0.03
LINC00339-202ENST00000416769 AGO3Q9H9G7 860 aaKnown RBP14.86□□□□□ -0.03
LINC00339-202ENST00000416769 ADGRA3Q8IWK6 1321 aa14.86□□□□□ -0.03
LINC00339-202ENST00000416769 CAND2O75155 1236 aa14.85□□□□□ -0.03
LINC00339-202ENST00000416769 CDC45O75419 566 aa14.85□□□□□ -0.03
LINC00339-202ENST00000416769 KCNA2P16389 499 aa14.85□□□□□ -0.03
LINC00339-202ENST00000416769 DNAJB1P25685 340 aa14.85□□□□□ -0.03
LINC00339-202ENST00000416769 IRS1P35568 1242 aa14.85□□□□□ -0.03
LINC00339-202ENST00000416769 TCF7P36402 384 aaPredicted RBP14.85□□□□□ -0.03
LINC00339-202ENST00000416769 GNPTABQ3T906 1256 aa14.85□□□□□ -0.03
LINC00339-202ENST00000416769 PCNX4Q63HM2 1172 aa14.85□□□□□ -0.03
LINC00339-202ENST00000416769 RTN4RL1Q86UN2 441 aaPredicted RBP14.85□□□□□ -0.03
LINC00339-202ENST00000416769 FIBCD1Q8N539 461 aa14.85□□□□□ -0.03
LINC00339-202ENST00000416769 SMARCC2Q8TAQ2 1214 aa14.85□□□□□ -0.03
LINC00339-202ENST00000416769 DNAJB3Q8WWF6 145 aa14.85□□□□□ -0.03
LINC00339-202ENST00000416769 RUFY2Q8WXA3 655 aa14.85□□□□□ -0.03
LINC00339-202ENST00000416769 SAMD11Q96NU1 681 aa14.85□□□□□ -0.03
LINC00339-202ENST00000416769 PCYT2Q99447 389 aa14.85□□□□□ -0.03
LINC00339-202ENST00000416769 IGFLR1Q9H665 355 aa14.85□□□□□ -0.03
LINC00339-202ENST00000416769 ALG13Q9NP73 1137 aaKnown RBP14.85□□□□□ -0.03
LINC00339-202ENST00000416769 ARIH1Q9Y4X5 557 aaPredicted RBP14.85□□□□□ -0.03
LINC00339-202ENST00000416769 C19orf67A6NJJ6 358 aa14.84□□□□□ -0.03
LINC00339-202ENST00000416769 ENPP3O14638 875 aa14.84□□□□□ -0.03
LINC00339-202ENST00000416769 DCXO43602 365 aa14.84□□□□□ -0.03
LINC00339-202ENST00000416769 BMPR1AP36894 532 aa14.84□□□□□ -0.03
LINC00339-202ENST00000416769 IGBP1P78318 339 aa14.84□□□□□ -0.03
LINC00339-202ENST00000416769 TMEM62Q0P6H9 643 aa14.84□□□□□ -0.03
LINC00339-202ENST00000416769 TRDNQ13061 729 aa14.84□□□□□ -0.03
LINC00339-202ENST00000416769 PPFIA1Q13136 1202 aa14.84□□□□□ -0.03
LINC00339-202ENST00000416769 GRIK4Q16099 956 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms