RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 NECTIN1Q15223 517 aa16.57■□□□□ 0.24
PAF1-202ENST00000416728 UBE2SQ16763 222 aa16.57■□□□□ 0.24
PAF1-202ENST00000416728 MICU3Q86XE3 530 aa16.57■□□□□ 0.24
PAF1-202ENST00000416728 CCDC82Q8N4S0 544 aa16.57■□□□□ 0.24
PAF1-202ENST00000416728 FBXO22Q8NEZ5 403 aa16.57■□□□□ 0.24
PAF1-202ENST00000416728 SP7Q8TDD2 431 aaPredicted RBP16.57■□□□□ 0.24
PAF1-202ENST00000416728 APBB2Q92870 758 aa16.57■□□□□ 0.24
PAF1-202ENST00000416728 YME1L1Q96TA2 773 aa16.57■□□□□ 0.24
PAF1-202ENST00000416728 C17orf80Q9BSJ5 609 aa16.57■□□□□ 0.24
PAF1-202ENST00000416728 LRRC2Q9BYS8 371 aa16.57■□□□□ 0.24
PAF1-202ENST00000416728 OSBPL7Q9BZF2 842 aa16.57■□□□□ 0.24
PAF1-202ENST00000416728 ATP9AO75110 1047 aa16.56■□□□□ 0.24
PAF1-202ENST00000416728 UPP2O95045 317 aa16.56■□□□□ 0.24
PAF1-202ENST00000416728 ITGB5P18084 799 aa16.56■□□□□ 0.24
PAF1-202ENST00000416728 COL9A1P20849 921 aa16.56■□□□□ 0.24
PAF1-202ENST00000416728 MTMR1Q13613 665 aa16.56■□□□□ 0.24
PAF1-202ENST00000416728 FAM26DQ5JW98 314 aa16.56■□□□□ 0.24
PAF1-202ENST00000416728 TAF2Q6P1X5 1199 aa16.56■□□□□ 0.24
PAF1-202ENST00000416728 SYNE3Q6ZMZ3 975 aa16.56■□□□□ 0.24
PAF1-202ENST00000416728 TMTC3Q6ZXV5 915 aa16.56■□□□□ 0.24
PAF1-202ENST00000416728 HEATR3Q7Z4Q2 680 aa16.56■□□□□ 0.24
PAF1-202ENST00000416728 FANCBQ8NB91 859 aa16.56■□□□□ 0.24
PAF1-202ENST00000416728 SEPT1Q8WYJ6 367 aa16.56■□□□□ 0.24
PAF1-202ENST00000416728 TOP1MTQ969P6 601 aa16.56■□□□□ 0.24
PAF1-202ENST00000416728 IFIH1Q9BYX4 1025 aaKnown RBP16.56■□□□□ 0.24
PAF1-202ENST00000416728 COL4A4P53420 1690 aaPredicted RBP16.56■□□□□ 0.24
PAF1-202ENST00000416728 XIRP2A4UGR9 3374 aa16.56■□□□□ 0.24
PAF1-202ENST00000416728 PPFIA1Q13136 1202 aa16.55■□□□□ 0.24
PAF1-202ENST00000416728 RNF20Q5VTR2 975 aa16.55■□□□□ 0.24
PAF1-202ENST00000416728 SGMS1Q86VZ5 419 aa16.55■□□□□ 0.24
PAF1-202ENST00000416728 GLG1Q92896 1179 aa16.55■□□□□ 0.24
PAF1-202ENST00000416728 SAMD11Q96NU1 681 aa16.55■□□□□ 0.24
PAF1-202ENST00000416728 EHMT1Q9H9B1 1298 aa16.55■□□□□ 0.24
PAF1-202ENST00000416728 ERAP1Q9NZ08 941 aa16.55■□□□□ 0.24
PAF1-202ENST00000416728 PKD2L1Q9P0L9 805 aa16.55■□□□□ 0.24
PAF1-202ENST00000416728 PCDHA6Q9UN73 950 aa16.55■□□□□ 0.24
PAF1-202ENST00000416728 PCDHA8Q9Y5H6 950 aa16.55■□□□□ 0.24
PAF1-202ENST00000416728 UBIAD1Q9Y5Z9 338 aa16.55■□□□□ 0.24
PAF1-202ENST00000416728 TRANK1O15050 2925 aa16.54■□□□□ 0.24
PAF1-202ENST00000416728 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.54■□□□□ 0.24
PAF1-202ENST00000416728 MAFGO15525 162 aa16.54■□□□□ 0.24
PAF1-202ENST00000416728 MARK3P27448 753 aa16.54■□□□□ 0.24
PAF1-202ENST00000416728 RPAINQ86UA6 219 aa16.54■□□□□ 0.24
PAF1-202ENST00000416728 RSPH3Q86UC2 560 aa16.54■□□□□ 0.24
PAF1-202ENST00000416728 JADE2Q9NQC1 790 aa16.54■□□□□ 0.24
PAF1-202ENST00000416728 TUBE1Q9UJT0 475 aa16.54■□□□□ 0.24
PAF1-202ENST00000416728 GSTTP1A0A1W2PQM5 241 aa16.53■□□□□ 0.24
PAF1-202ENST00000416728 CHRNA1P02708 482 aa16.53■□□□□ 0.24
PAF1-202ENST00000416728 GHRP10912 638 aa16.53■□□□□ 0.24
PAF1-202ENST00000416728 GRIK4Q16099 956 aa16.53■□□□□ 0.24
PAF1-202ENST00000416728 PTPROQ16827 1216 aa16.53■□□□□ 0.24
PAF1-202ENST00000416728 EPC2Q52LR7 807 aa16.53■□□□□ 0.24
PAF1-202ENST00000416728 RUFY4Q6ZNE9 571 aa16.53■□□□□ 0.24
PAF1-202ENST00000416728 C1QTNF1Q9BXJ1 281 aa16.53■□□□□ 0.24
PAF1-202ENST00000416728 SMARCAD1Q9H4L7 1026 aa16.53■□□□□ 0.24
PAF1-202ENST00000416728 UBE2ZQ9H832 354 aaPredicted RBP16.53■□□□□ 0.24
PAF1-202ENST00000416728 NCOR1O75376 2440 aa16.53■□□□□ 0.24
PAF1-202ENST00000416728 APOA5Q6Q788 366 aa16.52■□□□□ 0.24
PAF1-202ENST00000416728 MRPL38Q96DV4 380 aaKnown RBP16.52■□□□□ 0.24
PAF1-202ENST00000416728 NEK1Q96PY6 1258 aa16.52■□□□□ 0.24
PAF1-202ENST00000416728 JPH1Q9HDC5 661 aaPredicted RBP16.52■□□□□ 0.24
PAF1-202ENST00000416728 RBM28Q9NW13 759 aaKnown RBP16.52■□□□□ 0.24
PAF1-202ENST00000416728 TCF20Q9UGU0 1960 aaKnown RBP16.52■□□□□ 0.24
PAF1-202ENST00000416728 REV3LO60673 3130 aa16.52■□□□□ 0.23
PAF1-202ENST00000416728 CNTNAP5Q8WYK1 1306 aa16.52■□□□□ 0.23
PAF1-202ENST00000416728 MBLAC1A4D2B0 266 aaPredicted RBP16.51■□□□□ 0.23
PAF1-202ENST00000416728 NAPAP54920 295 aa16.51■□□□□ 0.23
PAF1-202ENST00000416728 BMP2KLQ5H9B9 411 aa16.51■□□□□ 0.23
PAF1-202ENST00000416728 WWC2Q6AWC2 1192 aa16.51■□□□□ 0.23
PAF1-202ENST00000416728 TMEM192Q8IY95 271 aa16.51■□□□□ 0.23
PAF1-202ENST00000416728 DNAJB3Q8WWF6 145 aa16.51■□□□□ 0.23
PAF1-202ENST00000416728 IL17RAQ96F46 866 aa16.51■□□□□ 0.23
PAF1-202ENST00000416728 KCNH7Q9NS40 1196 aa16.51■□□□□ 0.23
PAF1-202ENST00000416728 SLC9A2Q9UBY0 812 aa16.51■□□□□ 0.23
PAF1-202ENST00000416728 MICAL3Q7RTP6 2002 aa16.51■□□□□ 0.23
PAF1-202ENST00000416728 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.51■□□□□ 0.23
PAF1-202ENST00000416728 RRN3P2A6NIE6 340 aa16.51■□□□□ 0.23
PAF1-202ENST00000416728 H3BNC9 293 aa16.51■□□□□ 0.23
PAF1-202ENST00000416728 RPLP2P05387 115 aaKnown RBP16.51■□□□□ 0.23
PAF1-202ENST00000416728 KCNA5P22460 613 aa16.51■□□□□ 0.23
PAF1-202ENST00000416728 IGBP1P78318 339 aa16.51■□□□□ 0.23
PAF1-202ENST00000416728 MGAT3Q09327 533 aa16.51■□□□□ 0.23
PAF1-202ENST00000416728 GPM6BQ13491 265 aa16.51■□□□□ 0.23
PAF1-202ENST00000416728 LPIN1Q14693 890 aa16.51■□□□□ 0.23
PAF1-202ENST00000416728 RTN1Q16799 776 aa16.51■□□□□ 0.23
PAF1-202ENST00000416728 TIGD5Q53EQ6 642 aa16.51■□□□□ 0.23
PAF1-202ENST00000416728 PPP1R18Q6NYC8 613 aa16.51■□□□□ 0.23
PAF1-202ENST00000416728 TEX2Q8IWB9 1127 aa16.51■□□□□ 0.23
PAF1-202ENST00000416728 MXRA8Q9BRK3 442 aa16.51■□□□□ 0.23
PAF1-202ENST00000416728 SDF4Q9BRK5 362 aa16.51■□□□□ 0.23
PAF1-202ENST00000416728 AZI2Q9H6S1 392 aa16.51■□□□□ 0.23
PAF1-202ENST00000416728 RIC8AQ9NPQ8 531 aa16.51■□□□□ 0.23
PAF1-202ENST00000416728 SIP14410 1827 aa16.5■□□□□ 0.23
PAF1-202ENST00000416728 ZBTB43O43298 467 aa16.5■□□□□ 0.23
PAF1-202ENST00000416728 FOSP01100 380 aaPredicted RBP16.5■□□□□ 0.23
PAF1-202ENST00000416728 ADCY7P51828 1080 aa16.5■□□□□ 0.23
PAF1-202ENST00000416728 LEXMQ3ZCV2 418 aa16.5■□□□□ 0.23
PAF1-202ENST00000416728 MARCH8Q5T0T0 291 aa16.5■□□□□ 0.23
PAF1-202ENST00000416728 DHX32Q7L7V1 743 aaKnown RBP16.5■□□□□ 0.23
PAF1-202ENST00000416728 FIBCD1Q8N539 461 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms