RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 PPP2R5CQ13362 524 aa4.47□□□□□ -1.69
LINC01048-201ENST00000414480 PDCD2Q16342 344 aaPredicted RBP4.47□□□□□ -1.69
LINC01048-201ENST00000414480 KIF4BQ2VIQ3 1234 aa4.47□□□□□ -1.69
LINC01048-201ENST00000414480 CLEC10AQ8IUN9 316 aa4.47□□□□□ -1.69
LINC01048-201ENST00000414480 RGL4Q8IZJ4 473 aa4.47□□□□□ -1.69
LINC01048-201ENST00000414480 CMTR1Q8N1G2 835 aaKnown RBP4.47□□□□□ -1.69
LINC01048-201ENST00000414480 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.47□□□□□ -1.69
LINC01048-201ENST00000414480 SHKBP1Q8TBC3 707 aa4.47□□□□□ -1.69
LINC01048-201ENST00000414480 USP33Q8TEY7 942 aa4.47□□□□□ -1.69
LINC01048-201ENST00000414480 TBC1D22AQ8WUA7 517 aa4.47□□□□□ -1.69
LINC01048-201ENST00000414480 ARMC5Q96C12 935 aa4.47□□□□□ -1.69
LINC01048-201ENST00000414480 FAM83CQ9BQN1 747 aa4.47□□□□□ -1.69
LINC01048-201ENST00000414480 NACA2Q9H009 215 aa4.47□□□□□ -1.69
LINC01048-201ENST00000414480 ABCG4Q9H172 646 aa4.47□□□□□ -1.69
LINC01048-201ENST00000414480 PRKRIP1Q9H875 184 aaPredicted RBP4.47□□□□□ -1.69
LINC01048-201ENST00000414480 ARNT2Q9HBZ2 717 aa4.47□□□□□ -1.69
LINC01048-201ENST00000414480 PARP2Q9UGN5 583 aa4.47□□□□□ -1.69
LINC01048-201ENST00000414480 INPP5FQ9Y2H2 1132 aa4.47□□□□□ -1.69
LINC01048-201ENST00000414480 USP20Q9Y2K6 914 aa4.47□□□□□ -1.69
LINC01048-201ENST00000414480 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.47□□□□□ -1.69
LINC01048-201ENST00000414480 RTL1A6NKG5 1358 aa4.47□□□□□ -1.69
LINC01048-201ENST00000414480 COL4A5P29400 1685 aa4.47□□□□□ -1.69
LINC01048-201ENST00000414480 ANKRD31Q8N7Z5 1873 aa4.47□□□□□ -1.69
LINC01048-201ENST00000414480 TRPM7Q96QT4 1865 aa4.47□□□□□ -1.69
LINC01048-201ENST00000414480 SOS1Q07889 1333 aaPredicted RBP4.46□□□□□ -1.69
LINC01048-201ENST00000414480 SNED1Q8TER0 1413 aa4.46□□□□□ -1.69
LINC01048-201ENST00000414480 COL11A2P13942 1736 aaPredicted RBP4.46□□□□□ -1.69
LINC01048-201ENST00000414480 SLX4Q8IY92 1834 aa4.46□□□□□ -1.69
LINC01048-201ENST00000414480 A0A1W2PP64 1363 aa4.46□□□□□ -1.7
LINC01048-201ENST00000414480 LINC00854A0A1B0GVQ3 168 aa4.46□□□□□ -1.7
LINC01048-201ENST00000414480 FAM25EA8MYX2 175 aa4.46□□□□□ -1.7
LINC01048-201ENST00000414480 CHL1O00533 1208 aa4.46□□□□□ -1.7
LINC01048-201ENST00000414480 TNFRSF10BO14763 440 aa4.46□□□□□ -1.7
LINC01048-201ENST00000414480 FYB1O15117 783 aa4.46□□□□□ -1.7
LINC01048-201ENST00000414480 CELF2O95319 508 aaKnown RBP4.46□□□□□ -1.7
LINC01048-201ENST00000414480 KRT10P13645 584 aa4.46□□□□□ -1.7
LINC01048-201ENST00000414480 PHKG2P15735 406 aa4.46□□□□□ -1.7
LINC01048-201ENST00000414480 CCNCP24863 283 aa4.46□□□□□ -1.7
LINC01048-201ENST00000414480 HOXC13P31276 330 aa4.46□□□□□ -1.7
LINC01048-201ENST00000414480 GJA8P48165 433 aa4.46□□□□□ -1.7
LINC01048-201ENST00000414480 KIF11P52732 1056 aa4.46□□□□□ -1.7
LINC01048-201ENST00000414480 UBASH3AP57075 661 aa4.46□□□□□ -1.7
LINC01048-201ENST00000414480 GPSM2P81274 684 aa4.46□□□□□ -1.7
LINC01048-201ENST00000414480 SLC7A5Q01650 507 aa4.46□□□□□ -1.7
LINC01048-201ENST00000414480 DPYDQ12882 1025 aa4.46□□□□□ -1.7
LINC01048-201ENST00000414480 PTK7Q13308 1070 aa4.46□□□□□ -1.7
LINC01048-201ENST00000414480 RRS1Q15050 365 aaKnown RBP4.46□□□□□ -1.7
LINC01048-201ENST00000414480 PUM3Q15397 648 aaKnown RBP4.46□□□□□ -1.7
LINC01048-201ENST00000414480 TMEM95Q3KNT9 176 aa4.46□□□□□ -1.7
LINC01048-201ENST00000414480 ZC3H12BQ5HYM0 836 aaKnown RBP4.46□□□□□ -1.7
LINC01048-201ENST00000414480 OGFOD2Q6N063 350 aa4.46□□□□□ -1.7
LINC01048-201ENST00000414480 PRPF40BQ6NWY9 871 aaKnown RBP4.46□□□□□ -1.7
LINC01048-201ENST00000414480 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.46□□□□□ -1.7
LINC01048-201ENST00000414480 C14orf80Q86SX3 495 aa4.46□□□□□ -1.7
LINC01048-201ENST00000414480 USP48Q86UV5 1035 aa4.46□□□□□ -1.7
LINC01048-201ENST00000414480 TREML1Q86YW5 311 aa4.46□□□□□ -1.7
LINC01048-201ENST00000414480 FAM20CQ8IXL6 584 aa4.46□□□□□ -1.7
LINC01048-201ENST00000414480 CCDC144CPQ8IYA2 1237 aa4.46□□□□□ -1.7
LINC01048-201ENST00000414480 GPC2Q8N158 579 aa4.46□□□□□ -1.7
LINC01048-201ENST00000414480 SLC43A3Q8NBI5 491 aa4.46□□□□□ -1.7
LINC01048-201ENST00000414480 APPL2Q8NEU8 664 aa4.46□□□□□ -1.7
LINC01048-201ENST00000414480 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.46□□□□□ -1.7
LINC01048-201ENST00000414480 RELTQ969Z4 430 aa4.46□□□□□ -1.7
LINC01048-201ENST00000414480 TBC1D20Q96BZ9 403 aa4.46□□□□□ -1.7
LINC01048-201ENST00000414480 IPO9Q96P70 1041 aaKnown RBP4.46□□□□□ -1.7
LINC01048-201ENST00000414480 TCHPQ9BT92 498 aa4.46□□□□□ -1.7
LINC01048-201ENST00000414480 SLC12A5Q9H2X9 1139 aa4.46□□□□□ -1.7
LINC01048-201ENST00000414480 MRS2Q9HD23 443 aa4.46□□□□□ -1.7
LINC01048-201ENST00000414480 DISC1Q9NRI5 854 aa4.46□□□□□ -1.7
LINC01048-201ENST00000414480 ZNF277Q9NRM2 450 aaPredicted RBP4.46□□□□□ -1.7
LINC01048-201ENST00000414480 CHMP5Q9NZZ3 219 aa4.46□□□□□ -1.7
LINC01048-201ENST00000414480 ZMAT5Q9UDW3 170 aaKnown RBP4.46□□□□□ -1.7
LINC01048-201ENST00000414480 PGAP2Q9UHJ9 254 aa4.46□□□□□ -1.7
LINC01048-201ENST00000414480 NARFQ9UHQ1 456 aa4.46□□□□□ -1.7
LINC01048-201ENST00000414480 HIF3AQ9Y2N7 669 aa4.46□□□□□ -1.7
LINC01048-201ENST00000414480 PPP2R3BQ9Y5P8 575 aa4.46□□□□□ -1.7
LINC01048-201ENST00000414480 MAFBQ9Y5Q3 323 aaPredicted RBP4.46□□□□□ -1.7
LINC01048-201ENST00000414480 LRRFIP2Q9Y608 721 aaKnown RBP4.46□□□□□ -1.7
LINC01048-201ENST00000414480 KCNMB2Q9Y691 235 aa4.46□□□□□ -1.7
LINC01048-201ENST00000414480 BRCA2P51587 3418 aa4.46□□□□□ -1.7
LINC01048-201ENST00000414480 TONSLQ96HA7 1378 aa4.45□□□□□ -1.7
LINC01048-201ENST00000414480 C19orf81C9J6K1 198 aa4.45□□□□□ -1.7
LINC01048-201ENST00000414480 H0YC42 278 aa4.45□□□□□ -1.7
LINC01048-201ENST00000414480 SART1O43290 800 aaKnown RBP4.45□□□□□ -1.7
LINC01048-201ENST00000414480 LGR5O75473 907 aa4.45□□□□□ -1.7
LINC01048-201ENST00000414480 MTRF1O75570 445 aaKnown RBP4.45□□□□□ -1.7
LINC01048-201ENST00000414480 B3GALNT1O75752 331 aa4.45□□□□□ -1.7
LINC01048-201ENST00000414480 TRPA1O75762 1119 aa4.45□□□□□ -1.7
LINC01048-201ENST00000414480 SMNDC1O75940 238 aaKnown RBP eCLIP4.45□□□□□ -1.7
LINC01048-201ENST00000414480 SASH1O94885 1247 aa4.45□□□□□ -1.7
LINC01048-201ENST00000414480 ABL1P00519 1130 aa4.45□□□□□ -1.7
LINC01048-201ENST00000414480 SRGNP10124 158 aa4.45□□□□□ -1.7
LINC01048-201ENST00000414480 MYCLP1P12525 358 aaPredicted RBP4.45□□□□□ -1.7
LINC01048-201ENST00000414480 XRCC5P13010 732 aaKnown RBP4.45□□□□□ -1.7
LINC01048-201ENST00000414480 CAPN2P17655 700 aa4.45□□□□□ -1.7
LINC01048-201ENST00000414480 TRIM21P19474 475 aaKnown RBP4.45□□□□□ -1.7
LINC01048-201ENST00000414480 TNFAIP3P21580 790 aa4.45□□□□□ -1.7
LINC01048-201ENST00000414480 GUCY2CP25092 1073 aa4.45□□□□□ -1.7
LINC01048-201ENST00000414480 WEE1P30291 646 aa4.45□□□□□ -1.7
LINC01048-201ENST00000414480 TSPAN7P41732 249 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms