RNA–Protein interactions for RNA: ENST00000413517.1

HERPUD2-203, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-203ENST00000413517 EVPLQ92817 2033 aa9.81□□□□□ -0.84
HERPUD2-203ENST00000413517 SPATA31C2B4DYI2 1134 aa9.8□□□□□ -0.84
HERPUD2-203ENST00000413517 HAS3O00219 553 aa9.8□□□□□ -0.84
HERPUD2-203ENST00000413517 ATP9AO75110 1047 aa9.8□□□□□ -0.84
HERPUD2-203ENST00000413517 AP1G2O75843 785 aa9.8□□□□□ -0.84
HERPUD2-203ENST00000413517 CSF2RAP15509 400 aa9.8□□□□□ -0.84
HERPUD2-203ENST00000413517 ITGB5P18084 799 aa9.8□□□□□ -0.84
HERPUD2-203ENST00000413517 NAPAP54920 295 aa9.8□□□□□ -0.84
HERPUD2-203ENST00000413517 PFKFB3Q16875 520 aaPredicted RBP9.8□□□□□ -0.84
HERPUD2-203ENST00000413517 IER5LQ5T953 404 aa9.8□□□□□ -0.84
HERPUD2-203ENST00000413517 MFSD5Q6N075 450 aa9.8□□□□□ -0.84
HERPUD2-203ENST00000413517 SND1Q7KZF4 910 aaKnown RBP eCLIP9.8□□□□□ -0.84
HERPUD2-203ENST00000413517 DHX37Q8IY37 1157 aaKnown RBP9.8□□□□□ -0.84
HERPUD2-203ENST00000413517 PPTC7Q8NI37 304 aa9.8□□□□□ -0.84
HERPUD2-203ENST00000413517 CUL5Q93034 780 aa9.8□□□□□ -0.84
HERPUD2-203ENST00000413517 RIC8AQ9NPQ8 531 aa9.8□□□□□ -0.84
HERPUD2-203ENST00000413517 PCDHA6Q9UN73 950 aa9.8□□□□□ -0.84
HERPUD2-203ENST00000413517 PCDHA8Q9Y5H6 950 aa9.8□□□□□ -0.84
HERPUD2-203ENST00000413517 UBIAD1Q9Y5Z9 338 aa9.8□□□□□ -0.84
HERPUD2-203ENST00000413517 CHD7Q9P2D1 2997 aa9.8□□□□□ -0.84
HERPUD2-203ENST00000413517 MICAL3Q7RTP6 2002 aa9.8□□□□□ -0.84
HERPUD2-203ENST00000413517 COL6A3P12111 3177 aa9.79□□□□□ -0.84
HERPUD2-203ENST00000413517 TLR3O15455 904 aaKnown RBP9.79□□□□□ -0.84
HERPUD2-203ENST00000413517 PRPF3O43395 683 aaKnown RBP9.79□□□□□ -0.84
HERPUD2-203ENST00000413517 FIBPO43427 364 aa9.79□□□□□ -0.84
HERPUD2-203ENST00000413517 F2P00734 622 aa9.79□□□□□ -0.84
HERPUD2-203ENST00000413517 ACRP10323 421 aa9.79□□□□□ -0.84
HERPUD2-203ENST00000413517 SCG2P13521 617 aa9.79□□□□□ -0.84
HERPUD2-203ENST00000413517 KCNA2P16389 499 aa9.79□□□□□ -0.84
HERPUD2-203ENST00000413517 PSEN2P49810 448 aa9.79□□□□□ -0.84
HERPUD2-203ENST00000413517 ADCY7P51828 1080 aa9.79□□□□□ -0.84
HERPUD2-203ENST00000413517 CCL23P55773 120 aa9.79□□□□□ -0.84
HERPUD2-203ENST00000413517 CHMP4BP1P59074 171 aa9.79□□□□□ -0.84
HERPUD2-203ENST00000413517 FPGSQ05932 587 aa9.79□□□□□ -0.84
HERPUD2-203ENST00000413517 LAMC2Q13753 1193 aa9.79□□□□□ -0.84
HERPUD2-203ENST00000413517 BRDTQ58F21 947 aaPredicted RBP9.79□□□□□ -0.84
HERPUD2-203ENST00000413517 FAM47CQ5HY64 1035 aa9.79□□□□□ -0.84
HERPUD2-203ENST00000413517 GDF6Q6KF10 455 aaPredicted RBP9.79□□□□□ -0.84
HERPUD2-203ENST00000413517 PPP1R18Q6NYC8 613 aa9.79□□□□□ -0.84
HERPUD2-203ENST00000413517 NFRKBQ6P4R8 1299 aa9.79□□□□□ -0.84
HERPUD2-203ENST00000413517 Q7L0L9 218 aa9.79□□□□□ -0.84
HERPUD2-203ENST00000413517 TRIM50Q86XT4 487 aa9.79□□□□□ -0.84
HERPUD2-203ENST00000413517 ZNF710Q8N1W2 664 aa9.79□□□□□ -0.84
HERPUD2-203ENST00000413517 CYP2W1Q8TAV3 490 aa9.79□□□□□ -0.84
HERPUD2-203ENST00000413517 DHX38Q92620 1227 aaKnown RBP9.79□□□□□ -0.84
HERPUD2-203ENST00000413517 WNT8BQ93098 351 aa9.79□□□□□ -0.84
HERPUD2-203ENST00000413517 IL17RAQ96F46 866 aa9.79□□□□□ -0.84
HERPUD2-203ENST00000413517 SPATA33Q96N06 139 aa9.79□□□□□ -0.84
HERPUD2-203ENST00000413517 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.79□□□□□ -0.84
HERPUD2-203ENST00000413517 C16orf70Q9BSU1 422 aa9.79□□□□□ -0.84
HERPUD2-203ENST00000413517 ANO3Q9BYT9 981 aa9.79□□□□□ -0.84
HERPUD2-203ENST00000413517 HIPK3Q9H422 1215 aa9.79□□□□□ -0.84
HERPUD2-203ENST00000413517 CYP46A1Q9Y6A2 500 aa9.79□□□□□ -0.84
HERPUD2-203ENST00000413517 SMCO2A6NFE2 343 aa9.78□□□□□ -0.84
HERPUD2-203ENST00000413517 hCG_1984214I3L0E3 225 aa9.78□□□□□ -0.84
HERPUD2-203ENST00000413517 EDIL3O43854 480 aa9.78□□□□□ -0.84
HERPUD2-203ENST00000413517 KPNA6O60684 536 aa9.78□□□□□ -0.84
HERPUD2-203ENST00000413517 STAM2O75886 525 aa9.78□□□□□ -0.84
HERPUD2-203ENST00000413517 LARGE1O95461 756 aa9.78□□□□□ -0.84
HERPUD2-203ENST00000413517 LGALS2P05162 132 aa9.78□□□□□ -0.84
HERPUD2-203ENST00000413517 TGFB3P10600 412 aa9.78□□□□□ -0.84
HERPUD2-203ENST00000413517 IFNAR1P17181 557 aa9.78□□□□□ -0.84
HERPUD2-203ENST00000413517 ZNF200P98182 395 aaPredicted RBP9.78□□□□□ -0.84
HERPUD2-203ENST00000413517 DGKDQ16760 1214 aa9.78□□□□□ -0.84
HERPUD2-203ENST00000413517 CSPP1Q1MSJ5 1256 aa9.78□□□□□ -0.84
HERPUD2-203ENST00000413517 GNPTABQ3T906 1256 aa9.78□□□□□ -0.84
HERPUD2-203ENST00000413517 TMEM240Q5SV17 173 aa9.78□□□□□ -0.84
HERPUD2-203ENST00000413517 FAM109BQ6ICB4 259 aaPredicted RBP9.78□□□□□ -0.84
HERPUD2-203ENST00000413517 KCNV1Q6PIU1 500 aa9.78□□□□□ -0.84
HERPUD2-203ENST00000413517 METTL7BQ6UX53 244 aa9.78□□□□□ -0.84
HERPUD2-203ENST00000413517 CYFIP1Q7L576 1253 aa9.78□□□□□ -0.84
HERPUD2-203ENST00000413517 ZNF713Q8N859 430 aaPredicted RBP9.78□□□□□ -0.84
HERPUD2-203ENST00000413517 RASGRP4Q8TDF6 673 aa9.78□□□□□ -0.84
HERPUD2-203ENST00000413517 ADAMTS19Q8TE59 1207 aa9.78□□□□□ -0.84
HERPUD2-203ENST00000413517 CRYGNQ8WXF5 182 aa9.78□□□□□ -0.84
HERPUD2-203ENST00000413517 SCLYQ96I15 445 aa9.78□□□□□ -0.84
HERPUD2-203ENST00000413517 AIFM3Q96NN9 605 aa9.78□□□□□ -0.84
HERPUD2-203ENST00000413517 GPR20Q99678 358 aa9.78□□□□□ -0.84
HERPUD2-203ENST00000413517 ALG1Q9BT22 464 aa9.78□□□□□ -0.84
HERPUD2-203ENST00000413517 RNF26Q9BY78 433 aaPredicted RBP9.78□□□□□ -0.84
HERPUD2-203ENST00000413517 PDRG1Q9NUG6 133 aa9.78□□□□□ -0.84
HERPUD2-203ENST00000413517 PKD2L1Q9P0L9 805 aa9.78□□□□□ -0.84
HERPUD2-203ENST00000413517 HDAC6Q9UBN7 1215 aa9.78□□□□□ -0.84
HERPUD2-203ENST00000413517 GTF2IRD1Q9UHL9 959 aa9.78□□□□□ -0.84
HERPUD2-203ENST00000413517 CCDC196A0A1B0GTZ2 297 aa9.77□□□□□ -0.85
HERPUD2-203ENST00000413517 ESYT2A0FGR8 921 aa9.77□□□□□ -0.85
HERPUD2-203ENST00000413517 SPDYE3A6NKU9 549 aa9.77□□□□□ -0.85
HERPUD2-203ENST00000413517 PPFIA4O75335 1185 aa9.77□□□□□ -0.85
HERPUD2-203ENST00000413517 SREBF1P36956 1147 aa9.77□□□□□ -0.85
HERPUD2-203ENST00000413517 SP4Q02446 784 aa9.77□□□□□ -0.85
HERPUD2-203ENST00000413517 STK3Q13188 491 aa9.77□□□□□ -0.85
HERPUD2-203ENST00000413517 GPNMBQ14956 572 aa9.77□□□□□ -0.85
HERPUD2-203ENST00000413517 NPY5RQ15761 445 aa9.77□□□□□ -0.85
HERPUD2-203ENST00000413517 KIAA0753Q2KHM9 967 aa9.77□□□□□ -0.85
HERPUD2-203ENST00000413517 TRIM71Q2Q1W2 868 aaKnown RBP9.77□□□□□ -0.85
HERPUD2-203ENST00000413517 C8orf34Q49A92 452 aa9.77□□□□□ -0.85
HERPUD2-203ENST00000413517 RASIP1Q5U651 963 aa9.77□□□□□ -0.85
HERPUD2-203ENST00000413517 JAKMIP3Q5VZ66 844 aa9.77□□□□□ -0.85
HERPUD2-203ENST00000413517 XRRA1Q6P2D8 792 aa9.77□□□□□ -0.85
HERPUD2-203ENST00000413517 ZNF365Q70YC5 407 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms