RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 FBXL18Q96ME1 805 aa14.63□□□□□ -0.07
CHRNA1-205ENST00000409542 YME1L1Q96TA2 773 aa14.63□□□□□ -0.07
CHRNA1-205ENST00000409542 AMNQ9BXJ7 453 aa14.63□□□□□ -0.07
CHRNA1-205ENST00000409542 TUT1Q9H6E5 874 aaKnown RBP14.63□□□□□ -0.07
CHRNA1-205ENST00000409542 MLXIPQ9HAP2 919 aa14.63□□□□□ -0.07
CHRNA1-205ENST00000409542 CTNNA3Q9UI47 895 aa14.63□□□□□ -0.07
CHRNA1-205ENST00000409542 MAD2L2Q9UI95 211 aa14.63□□□□□ -0.07
CHRNA1-205ENST00000409542 GOLGA6L3A6NEY3 463 aa14.63□□□□□ -0.07
CHRNA1-205ENST00000409542 SGSM2O43147 1006 aa14.63□□□□□ -0.07
CHRNA1-205ENST00000409542 MRE11P49959 708 aa14.63□□□□□ -0.07
CHRNA1-205ENST00000409542 DLX2Q07687 328 aaPredicted RBP14.63□□□□□ -0.07
CHRNA1-205ENST00000409542 PUS10Q3MIT2 529 aaKnown RBP14.63□□□□□ -0.07
CHRNA1-205ENST00000409542 TIGD5Q53EQ6 642 aa14.63□□□□□ -0.07
CHRNA1-205ENST00000409542 CWC27Q6UX04 472 aaKnown RBP14.63□□□□□ -0.07
CHRNA1-205ENST00000409542 TICAM2Q86XR7 235 aa14.63□□□□□ -0.07
CHRNA1-205ENST00000409542 SEPT8Q92599 483 aa14.63□□□□□ -0.07
CHRNA1-205ENST00000409542 SAMD11Q96NU1 681 aa14.63□□□□□ -0.07
CHRNA1-205ENST00000409542 SETD4Q9NVD3 440 aa14.63□□□□□ -0.07
CHRNA1-205ENST00000409542 CLDND1Q9NY35 253 aa14.63□□□□□ -0.07
CHRNA1-205ENST00000409542 PCDHA1Q9Y5I3 950 aa14.63□□□□□ -0.07
CHRNA1-205ENST00000409542 BAZ2BQ9UIF8 2168 aaKnown RBP14.62□□□□□ -0.07
CHRNA1-205ENST00000409542 KLRF2D3W0D1 207 aa14.62□□□□□ -0.07
CHRNA1-205ENST00000409542 ZBTB5O15062 677 aa14.62□□□□□ -0.07
CHRNA1-205ENST00000409542 HSPA4P34932 840 aa14.62□□□□□ -0.07
CHRNA1-205ENST00000409542 GTF2F1P35269 517 aaKnown RBP eCLIP14.62□□□□□ -0.07
CHRNA1-205ENST00000409542 NEK4P51957 841 aa14.62□□□□□ -0.07
CHRNA1-205ENST00000409542 MRPS9P82933 396 aaKnown RBP14.62□□□□□ -0.07
CHRNA1-205ENST00000409542 NHLH1Q02575 133 aa14.62□□□□□ -0.07
CHRNA1-205ENST00000409542 SEMA3FQ13275 785 aa14.62□□□□□ -0.07
CHRNA1-205ENST00000409542 CUL4AQ13619 759 aa14.62□□□□□ -0.07
CHRNA1-205ENST00000409542 SEC23AQ15436 765 aa14.62□□□□□ -0.07
CHRNA1-205ENST00000409542 CLUL1Q15846 466 aa14.62□□□□□ -0.07
CHRNA1-205ENST00000409542 KCNV1Q6PIU1 500 aa14.62□□□□□ -0.07
CHRNA1-205ENST00000409542 CYB5R4Q7L1T6 521 aa14.62□□□□□ -0.07
CHRNA1-205ENST00000409542 RPAINQ86UA6 219 aa14.62□□□□□ -0.07
CHRNA1-205ENST00000409542 FCHSD1Q86WN1 690 aa14.62□□□□□ -0.07
CHRNA1-205ENST00000409542 TRIM50Q86XT4 487 aa14.62□□□□□ -0.07
CHRNA1-205ENST00000409542 NSUN3Q9H649 340 aaKnown RBP14.62□□□□□ -0.07
CHRNA1-205ENST00000409542 BRPF3Q9ULD4 1205 aa14.62□□□□□ -0.07
CHRNA1-205ENST00000409542 BAG4O95429 457 aaKnown RBP14.61□□□□□ -0.07
CHRNA1-205ENST00000409542 TGFB3P10600 412 aa14.61□□□□□ -0.07
CHRNA1-205ENST00000409542 IRS1P35568 1242 aa14.61□□□□□ -0.07
CHRNA1-205ENST00000409542 ADAM17P78536 824 aa14.61□□□□□ -0.07
CHRNA1-205ENST00000409542 CSPP1Q1MSJ5 1256 aa14.61□□□□□ -0.07
CHRNA1-205ENST00000409542 HFE2Q6ZVN8 426 aa14.61□□□□□ -0.07
CHRNA1-205ENST00000409542 PIGSQ96S52 555 aa14.61□□□□□ -0.07
CHRNA1-205ENST00000409542 IFIH1Q9BYX4 1025 aaKnown RBP14.61□□□□□ -0.07
CHRNA1-205ENST00000409542 IL25Q9H293 177 aa14.61□□□□□ -0.07
CHRNA1-205ENST00000409542 RALGAPA2Q2PPJ7 1873 aa14.61□□□□□ -0.07
CHRNA1-205ENST00000409542 COL4A6Q14031 1691 aa14.6□□□□□ -0.07
CHRNA1-205ENST00000409542 PALM3A6NDB9 673 aaPredicted RBP14.6□□□□□ -0.07
CHRNA1-205ENST00000409542 GRM6O15303 877 aa14.6□□□□□ -0.07
CHRNA1-205ENST00000409542 CHRNA1P02708 482 aa14.6□□□□□ -0.07
CHRNA1-205ENST00000409542 CCND2P30279 289 aa14.6□□□□□ -0.07
CHRNA1-205ENST00000409542 HYAL1Q12794 435 aa14.6□□□□□ -0.07
CHRNA1-205ENST00000409542 CTC1Q2NKJ3 1217 aa14.6□□□□□ -0.07
CHRNA1-205ENST00000409542 FAM26DQ5JW98 314 aa14.6□□□□□ -0.07
CHRNA1-205ENST00000409542 IFIT1BQ5T764 474 aaKnown RBP14.6□□□□□ -0.07
CHRNA1-205ENST00000409542 CYFIP1Q7L576 1253 aa14.6□□□□□ -0.07
CHRNA1-205ENST00000409542 HOMER1Q86YM7 354 aa14.6□□□□□ -0.07
CHRNA1-205ENST00000409542 ADHFE1Q8IWW8 467 aa14.6□□□□□ -0.07
CHRNA1-205ENST00000409542 INTS4Q96HW7 963 aaKnown RBP14.6□□□□□ -0.07
CHRNA1-205ENST00000409542 GPR20Q99678 358 aa14.6□□□□□ -0.07
CHRNA1-205ENST00000409542 SENP2Q9HC62 589 aa14.6□□□□□ -0.07
CHRNA1-205ENST00000409542 MAP3K20Q9NYL2 800 aaKnown RBP14.6□□□□□ -0.07
CHRNA1-205ENST00000409542 GCOM1H8Y6P7 765 aaPredicted RBP14.59□□□□□ -0.07
CHRNA1-205ENST00000409542 CYTH3O43739 400 aa14.59□□□□□ -0.07
CHRNA1-205ENST00000409542 CSPG5O95196 566 aa14.59□□□□□ -0.07
CHRNA1-205ENST00000409542 POLR2MP0CAP2 368 aa14.59□□□□□ -0.07
CHRNA1-205ENST00000409542 CTNNB1P35222 781 aa14.59□□□□□ -0.07
CHRNA1-205ENST00000409542 RUFY4Q6ZNE9 571 aa14.59□□□□□ -0.07
CHRNA1-205ENST00000409542 RUFY2Q8WXA3 655 aa14.59□□□□□ -0.07
CHRNA1-205ENST00000409542 TMX3Q96JJ7 454 aa14.59□□□□□ -0.07
CHRNA1-205ENST00000409542 LSG1Q9H089 658 aaKnown RBP14.59□□□□□ -0.07
CHRNA1-205ENST00000409542 RTEL1Q9NZ71 1219 aa14.59□□□□□ -0.07
CHRNA1-205ENST00000409542 PRKAG3Q9UGI9 489 aa14.59□□□□□ -0.07
CHRNA1-205ENST00000409542 ZNF318Q5VUA4 2279 aa14.59□□□□□ -0.07
CHRNA1-205ENST00000409542 C5orf67F2Z3F1 127 aa14.58□□□□□ -0.08
CHRNA1-205ENST00000409542 LINC01565O15544 149 aa14.58□□□□□ -0.08
CHRNA1-205ENST00000409542 MBTPS2O43462 519 aa14.58□□□□□ -0.08
CHRNA1-205ENST00000409542 BMPR1AP36894 532 aa14.58□□□□□ -0.08
CHRNA1-205ENST00000409542 UTP14CQ5TAP6 766 aaKnown RBP14.58□□□□□ -0.08
CHRNA1-205ENST00000409542 FIBCD1Q8N539 461 aa14.58□□□□□ -0.08
CHRNA1-205ENST00000409542 LMBR1Q8WVP7 490 aa14.58□□□□□ -0.08
CHRNA1-205ENST00000409542 PHOX2BQ99453 314 aa14.58□□□□□ -0.08
CHRNA1-205ENST00000409542 UBAC1Q9BSL1 405 aa14.58□□□□□ -0.08
CHRNA1-205ENST00000409542 DSCC1Q9BVC3 393 aa14.58□□□□□ -0.08
CHRNA1-205ENST00000409542 KRT23Q9C075 422 aa14.58□□□□□ -0.08
CHRNA1-205ENST00000409542 RIOX1Q9H6W3 641 aa14.58□□□□□ -0.08
CHRNA1-205ENST00000409542 RC3H2Q9HBD1 1191 aaKnown RBP14.58□□□□□ -0.08
CHRNA1-205ENST00000409542 MUTYHQ9UIF7 546 aa14.58□□□□□ -0.08
CHRNA1-205ENST00000409542 SPATA31C2B4DYI2 1134 aa14.57□□□□□ -0.08
CHRNA1-205ENST00000409542 NOP56O00567 594 aaKnown RBP14.57□□□□□ -0.08
CHRNA1-205ENST00000409542 CAND2O75155 1236 aa14.57□□□□□ -0.08
CHRNA1-205ENST00000409542 GHRP10912 638 aa14.57□□□□□ -0.08
CHRNA1-205ENST00000409542 ICAM3P32942 547 aa14.57□□□□□ -0.08
CHRNA1-205ENST00000409542 NT5C2P49902 561 aa14.57□□□□□ -0.08
CHRNA1-205ENST00000409542 ARHGAP4P98171 946 aa14.57□□□□□ -0.08
CHRNA1-205ENST00000409542 CAMK1Q14012 370 aa14.57□□□□□ -0.08
CHRNA1-205ENST00000409542 SMAD2Q15796 467 aaKnown RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms