RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 DDTLA6NHG4 134 aaPredicted RBP18.27■□□□□ 0.52
COL23A1-202ENST00000407622 MEIS2O14770 477 aa18.27■□□□□ 0.52
COL23A1-202ENST00000407622 PRPF6O94906 941 aaKnown RBP18.27■□□□□ 0.52
COL23A1-202ENST00000407622 CAPN2P17655 700 aa18.27■□□□□ 0.52
COL23A1-202ENST00000407622 MCM3P25205 808 aa18.27■□□□□ 0.52
COL23A1-202ENST00000407622 PSMC6P62333 389 aa18.27■□□□□ 0.52
COL23A1-202ENST00000407622 SEPT2Q15019 361 aa18.27■□□□□ 0.52
COL23A1-202ENST00000407622 MUM1L1Q5H9M0 696 aa18.27■□□□□ 0.52
COL23A1-202ENST00000407622 FOXR2Q6PJQ5 311 aa18.27■□□□□ 0.52
COL23A1-202ENST00000407622 MMGT1Q8N4V1 131 aa18.27■□□□□ 0.52
COL23A1-202ENST00000407622 MASTLQ96GX5 879 aa18.27■□□□□ 0.52
COL23A1-202ENST00000407622 ZHX3Q9H4I2 956 aa18.27■□□□□ 0.52
COL23A1-202ENST00000407622 HYOU1Q9Y4L1 999 aa18.27■□□□□ 0.52
COL23A1-202ENST00000407622 SSU72P8A0A1W2PR75 194 aa18.27■□□□□ 0.51
COL23A1-202ENST00000407622 SLC12A3P55017 1021 aa18.27■□□□□ 0.51
COL23A1-202ENST00000407622 KLHDC7AQ5VTJ3 777 aa18.27■□□□□ 0.51
COL23A1-202ENST00000407622 ZNF572Q7Z3I7 529 aaPredicted RBP18.27■□□□□ 0.51
COL23A1-202ENST00000407622 SIAH1Q8IUQ4 282 aa18.27■□□□□ 0.51
COL23A1-202ENST00000407622 CCDC65Q8IXS2 484 aa18.27■□□□□ 0.51
COL23A1-202ENST00000407622 ALS2CR12Q96Q35 445 aa18.27■□□□□ 0.51
COL23A1-202ENST00000407622 DBNDD1Q9H9R9 158 aa18.27■□□□□ 0.51
COL23A1-202ENST00000407622 BMP2KQ9NSY1 1161 aaPredicted RBP18.27■□□□□ 0.51
COL23A1-202ENST00000407622 AGPSO00116 658 aa18.26■□□□□ 0.51
COL23A1-202ENST00000407622 MEIS1O00470 390 aa18.26■□□□□ 0.51
COL23A1-202ENST00000407622 ACTN2P35609 894 aa18.26■□□□□ 0.51
COL23A1-202ENST00000407622 GGCXP38435 758 aa18.26■□□□□ 0.51
COL23A1-202ENST00000407622 CRKP46108 304 aa18.26■□□□□ 0.51
COL23A1-202ENST00000407622 ARID5AQ03989 594 aa18.26■□□□□ 0.51
COL23A1-202ENST00000407622 SPIRE1Q08AE8 756 aa18.26■□□□□ 0.51
COL23A1-202ENST00000407622 ENOX2Q16206 610 aaKnown RBP18.26■□□□□ 0.51
COL23A1-202ENST00000407622 SFMBT2Q5VUG0 894 aa18.26■□□□□ 0.51
COL23A1-202ENST00000407622 HHIPL2Q6UWX4 724 aa18.26■□□□□ 0.51
COL23A1-202ENST00000407622 MS4A14Q96JA4 679 aa18.26■□□□□ 0.51
COL23A1-202ENST00000407622 ACBD3Q9H3P7 528 aa18.26■□□□□ 0.51
COL23A1-202ENST00000407622 BCAS3Q9H6U6 928 aa18.26■□□□□ 0.51
COL23A1-202ENST00000407622 EMILIN3Q9NT22 766 aa18.26■□□□□ 0.51
COL23A1-202ENST00000407622 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.26■□□□□ 0.51
COL23A1-202ENST00000407622 RBAK-RBAKDNI3L0D1 243 aa18.26■□□□□ 0.51
COL23A1-202ENST00000407622 PRLRP16471 622 aa18.26■□□□□ 0.51
COL23A1-202ENST00000407622 SLFN13Q68D06 897 aa18.26■□□□□ 0.51
COL23A1-202ENST00000407622 SH3BP5LQ7L8J4 393 aa18.26■□□□□ 0.51
COL23A1-202ENST00000407622 AENQ8WTP8 325 aaKnown RBP18.26■□□□□ 0.51
COL23A1-202ENST00000407622 CEP63Q96MT8 703 aa18.26■□□□□ 0.51
COL23A1-202ENST00000407622 EDEM3Q9BZQ6 932 aa18.26■□□□□ 0.51
COL23A1-202ENST00000407622 POLD4Q9HCU8 107 aa18.26■□□□□ 0.51
COL23A1-202ENST00000407622 SLC9C1Q4G0N8 1177 aa18.25■□□□□ 0.51
COL23A1-202ENST00000407622 PRR16Q569H4 304 aa18.25■□□□□ 0.51
COL23A1-202ENST00000407622 IQCEQ6IPM2 695 aa18.25■□□□□ 0.51
COL23A1-202ENST00000407622 FOXR1Q6PIV2 292 aa18.25■□□□□ 0.51
COL23A1-202ENST00000407622 CATSPER3Q86XQ3 398 aa18.25■□□□□ 0.51
COL23A1-202ENST00000407622 KIAA0825Q8IV33 1275 aa18.25■□□□□ 0.51
COL23A1-202ENST00000407622 GOLGA5Q8TBA6 731 aa18.25■□□□□ 0.51
COL23A1-202ENST00000407622 ETNPPLQ8TBG4 499 aa18.25■□□□□ 0.51
COL23A1-202ENST00000407622 CRYGNQ8WXF5 182 aa18.25■□□□□ 0.51
COL23A1-202ENST00000407622 DHX36Q9H2U1 1008 aaKnown RBP18.25■□□□□ 0.51
COL23A1-202ENST00000407622 SMCHD1A6NHR9 2005 aa18.25■□□□□ 0.51
COL23A1-202ENST00000407622 DNA2P51530 1060 aa18.24■□□□□ 0.51
COL23A1-202ENST00000407622 NAP1L1P55209 391 aaKnown RBP18.24■□□□□ 0.51
COL23A1-202ENST00000407622 ARHGAP4P98171 946 aa18.24■□□□□ 0.51
COL23A1-202ENST00000407622 ADAM9Q13443 819 aa18.24■□□□□ 0.51
COL23A1-202ENST00000407622 RAPGEF1Q13905 1077 aa18.24■□□□□ 0.51
COL23A1-202ENST00000407622 HAUS3Q68CZ6 603 aa18.24■□□□□ 0.51
COL23A1-202ENST00000407622 CCDC125Q86Z20 511 aa18.24■□□□□ 0.51
COL23A1-202ENST00000407622 TBC1D5Q92609 795 aa18.24■□□□□ 0.51
COL23A1-202ENST00000407622 MBOAT7Q96N66 472 aa18.24■□□□□ 0.51
COL23A1-202ENST00000407622 NOX5Q96PH1 765 aa18.24■□□□□ 0.51
COL23A1-202ENST00000407622 PACSIN1Q9BY11 444 aa18.24■□□□□ 0.51
COL23A1-202ENST00000407622 EHD4Q9H223 541 aa18.24■□□□□ 0.51
COL23A1-202ENST00000407622 RBM12Q9NTZ6 932 aaKnown RBP18.24■□□□□ 0.51
COL23A1-202ENST00000407622 FAM198AQ9UFP1 575 aa18.24■□□□□ 0.51
COL23A1-202ENST00000407622 CYP3A7-CYP3A51PA0A087WV96 503 aa18.24■□□□□ 0.51
COL23A1-202ENST00000407622 FRMD3A2A2Y4 597 aa18.24■□□□□ 0.51
COL23A1-202ENST00000407622 SERPING1P05155 500 aa18.24■□□□□ 0.51
COL23A1-202ENST00000407622 KRT18P05783 430 aaKnown RBP18.24■□□□□ 0.51
COL23A1-202ENST00000407622 ACTN1P12814 892 aa18.24■□□□□ 0.51
COL23A1-202ENST00000407622 TCP1P17987 556 aaKnown RBP18.24■□□□□ 0.51
COL23A1-202ENST00000407622 CYP3A7P24462 503 aa18.24■□□□□ 0.51
COL23A1-202ENST00000407622 USP11P51784 963 aa18.24■□□□□ 0.51
COL23A1-202ENST00000407622 MARSP56192 900 aaKnown RBP18.24■□□□□ 0.51
COL23A1-202ENST00000407622 PABPC4Q13310 644 aaKnown RBP eCLIP18.24■□□□□ 0.51
COL23A1-202ENST00000407622 USH1GQ495M9 461 aa18.24■□□□□ 0.51
COL23A1-202ENST00000407622 FAM133AQ8N9E0 248 aa18.24■□□□□ 0.51
COL23A1-202ENST00000407622 ZNF622Q969S3 477 aaKnown RBP eCLIP18.24■□□□□ 0.51
COL23A1-202ENST00000407622 A0A087X0T9 212 aa18.23■□□□□ 0.51
COL23A1-202ENST00000407622 H0YIN7 160 aa18.23■□□□□ 0.51
COL23A1-202ENST00000407622 GDF11O95390 407 aa18.23■□□□□ 0.51
COL23A1-202ENST00000407622 FAM228BP0C875 321 aa18.23■□□□□ 0.51
COL23A1-202ENST00000407622 KLRC1P26715 233 aa18.23■□□□□ 0.51
COL23A1-202ENST00000407622 HOXA7P31268 230 aaPredicted RBP18.23■□□□□ 0.51
COL23A1-202ENST00000407622 HOXD13P35453 343 aa18.23■□□□□ 0.51
COL23A1-202ENST00000407622 CERKLQ49MI3 558 aaPredicted RBP18.23■□□□□ 0.51
COL23A1-202ENST00000407622 ZC3H3Q8IXZ2 948 aaKnown RBP18.23■□□□□ 0.51
COL23A1-202ENST00000407622 LENG9Q96B70 501 aa18.23■□□□□ 0.51
COL23A1-202ENST00000407622 CCDC17Q96LX7 622 aa18.23■□□□□ 0.51
COL23A1-202ENST00000407622 GANQ9H2C0 597 aa18.23■□□□□ 0.51
COL23A1-202ENST00000407622 ATAD5Q96QE3 1844 aa18.23■□□□□ 0.51
COL23A1-202ENST00000407622 COL11A2P13942 1736 aaPredicted RBP18.23■□□□□ 0.51
COL23A1-202ENST00000407622 FAM86B1E9PN63 330 aa18.23■□□□□ 0.51
COL23A1-202ENST00000407622 PALMO75781 387 aa18.23■□□□□ 0.51
COL23A1-202ENST00000407622 FTCDO95954 541 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms