RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 RABGGTAQ92696 567 aa13.26□□□□□ -0.29
CACNA1C-219ENST00000399649 N4BP2L2Q92802 583 aaPredicted RBP13.26□□□□□ -0.29
CACNA1C-219ENST00000399649 KIF17Q9P2E2 1029 aa13.26□□□□□ -0.29
CACNA1C-219ENST00000399649 MOSPD1Q9UJG1 213 aa13.26□□□□□ -0.29
CACNA1C-219ENST00000399649 L3MBTL1Q9Y468 752 aa13.26□□□□□ -0.29
CACNA1C-219ENST00000399649 COBLO75128 1261 aa13.26□□□□□ -0.29
CACNA1C-219ENST00000399649 HSPA4LO95757 839 aa13.26□□□□□ -0.29
CACNA1C-219ENST00000399649 UBXN2AP68543 259 aa13.26□□□□□ -0.29
CACNA1C-219ENST00000399649 TMEM259Q4ZIN3 620 aa13.26□□□□□ -0.29
CACNA1C-219ENST00000399649 ARMC9Q7Z3E5 817 aa13.26□□□□□ -0.29
CACNA1C-219ENST00000399649 ANKRD13CQ8N6S4 541 aa13.26□□□□□ -0.29
CACNA1C-219ENST00000399649 AK8Q96MA6 479 aa13.26□□□□□ -0.29
CACNA1C-219ENST00000399649 LRRC37BQ96QE4 947 aa13.26□□□□□ -0.29
CACNA1C-219ENST00000399649 SUN2Q9UH99 717 aa13.26□□□□□ -0.29
CACNA1C-219ENST00000399649 LRRN2O75325 713 aa13.26□□□□□ -0.29
CACNA1C-219ENST00000399649 SRGAP2CP0DJJ0 459 aa13.26□□□□□ -0.29
CACNA1C-219ENST00000399649 ZNF18P17022 549 aa13.26□□□□□ -0.29
CACNA1C-219ENST00000399649 BCAMP50895 628 aa13.26□□□□□ -0.29
CACNA1C-219ENST00000399649 OCA2Q04671 838 aa13.26□□□□□ -0.29
CACNA1C-219ENST00000399649 P2RX5Q93086 422 aa13.26□□□□□ -0.29
CACNA1C-219ENST00000399649 SUGT1Q9Y2Z0 365 aa13.26□□□□□ -0.29
CACNA1C-219ENST00000399649 DTNBO60941 627 aa13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 ETF1P62495 437 aaKnown RBP13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 PTK2BQ14289 1009 aa13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 RNF219Q5W0B1 726 aaPredicted RBP13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 TESK2Q96S53 571 aa13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 GCNT4Q9P109 453 aa13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 PCDHA7Q9UN72 937 aa13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 KIF24Q5T7B8 1368 aa13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 MAPK13O15264 365 aa13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 BNIP3LO60238 219 aa13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 PAPOLAP51003 745 aaKnown RBP13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 TBC1D10BQ4KMP7 808 aaPredicted RBP13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 CRLF3Q8IUI8 442 aa13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 NUDCD3Q8IVD9 361 aa13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 MRFAP1L1Q96HT8 127 aa13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 WDR11Q9BZH6 1224 aa13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 ACTR5Q9H9F9 607 aaPredicted RBP13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 ARHGEF9O43307 516 aa13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 GFPT2O94808 682 aa13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 TMEM63CQ9P1W3 806 aa13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 STX18Q9P2W9 335 aaKnown RBP13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 NXF1Q9UBU9 619 aaKnown RBP13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 CDV3Q9UKY7 258 aaKnown RBP13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 PPP6R2O75170 966 aa13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 E2F6O75461 281 aa13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 BRD1O95696 1058 aa13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 ZBED1O96006 694 aa13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 LMNAP02545 664 aaKnown RBP13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 TRIP13Q15645 432 aaPredicted RBP13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 RWDD4Q6NW29 188 aaKnown RBP13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 CENPUQ71F23 418 aa13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 RPF1Q9H9Y2 349 aaKnown RBP13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 CLIC2O15247 247 aa13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 HADHAP40939 763 aa13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 MAN2A1Q16706 1144 aa13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 IMPG1Q17R60 797 aa13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 LRRC23Q53EV4 343 aaPredicted RBP13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 ZNF658Q5TYW1 1059 aaPredicted RBP13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 GRAMD4Q6IC98 578 aa13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 CEP170P1Q96L14 293 aa13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 CHCHD3Q9NX63 227 aaKnown RBP13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 EDC4Q6P2E9 1401 aaKnown RBP13.25□□□□□ -0.29
CACNA1C-219ENST00000399649 E9PMD0 336 aa13.24□□□□□ -0.29
CACNA1C-219ENST00000399649 MAN1A2O60476 641 aa13.24□□□□□ -0.29
CACNA1C-219ENST00000399649 CTNND1O60716 968 aaKnown RBP13.24□□□□□ -0.29
CACNA1C-219ENST00000399649 DSTYKQ6XUX3 929 aa13.24□□□□□ -0.29
CACNA1C-219ENST00000399649 ELMOD1Q8N336 334 aa13.24□□□□□ -0.29
CACNA1C-219ENST00000399649 FAM133AQ8N9E0 248 aa13.24□□□□□ -0.29
CACNA1C-219ENST00000399649 FAF2Q96CS3 445 aa13.24□□□□□ -0.29
CACNA1C-219ENST00000399649 GINM1Q9NU53 330 aa13.24□□□□□ -0.29
CACNA1C-219ENST00000399649 SPAG7O75391 227 aa13.24□□□□□ -0.29
CACNA1C-219ENST00000399649 TTLL1O95922 423 aa13.24□□□□□ -0.29
CACNA1C-219ENST00000399649 KCNA4P22459 653 aa13.24□□□□□ -0.29
CACNA1C-219ENST00000399649 RASGRF2O14827 1237 aa13.24□□□□□ -0.29
CACNA1C-219ENST00000399649 PPEF1O14829 653 aaPredicted RBP13.24□□□□□ -0.29
CACNA1C-219ENST00000399649 C16orf87Q6PH81 154 aa13.24□□□□□ -0.29
CACNA1C-219ENST00000399649 PYROXD1Q8WU10 500 aa13.24□□□□□ -0.29
CACNA1C-219ENST00000399649 INPP5FQ9Y2H2 1132 aa13.24□□□□□ -0.29
CACNA1C-219ENST00000399649 IPO5O00410 1097 aaKnown RBP13.24□□□□□ -0.29
CACNA1C-219ENST00000399649 ATP8B1O43520 1251 aa13.24□□□□□ -0.29
CACNA1C-219ENST00000399649 HSPD1P10809 573 aaKnown RBP13.24□□□□□ -0.29
CACNA1C-219ENST00000399649 SLCO1A2P46721 670 aa13.24□□□□□ -0.29
CACNA1C-219ENST00000399649 DHX9Q08211 1270 aaKnown RBP13.24□□□□□ -0.29
CACNA1C-219ENST00000399649 PAWRQ96IZ0 340 aaKnown RBP13.24□□□□□ -0.29
CACNA1C-219ENST00000399649 RRP15Q9Y3B9 282 aaKnown RBP13.24□□□□□ -0.29
CACNA1C-219ENST00000399649 ERVV-2B6SEH9 535 aa13.24□□□□□ -0.29
CACNA1C-219ENST00000399649 SEC31AO94979 1220 aaKnown RBP13.24□□□□□ -0.29
CACNA1C-219ENST00000399649 FMNL1O95466 1100 aaPredicted RBP13.24□□□□□ -0.29
CACNA1C-219ENST00000399649 SERPING1P05155 500 aa13.24□□□□□ -0.29
CACNA1C-219ENST00000399649 HLA-DPA1P20036 260 aa13.24□□□□□ -0.29
CACNA1C-219ENST00000399649 GPATCH4Q5T3I0 446 aaKnown RBP13.24□□□□□ -0.29
CACNA1C-219ENST00000399649 IFT43Q96FT9 208 aa13.24□□□□□ -0.29
CACNA1C-219ENST00000399649 ZWILCHQ9H900 591 aa13.24□□□□□ -0.29
CACNA1C-219ENST00000399649 ZMYM4Q5VZL5 1548 aa13.24□□□□□ -0.29
CACNA1C-219ENST00000399649 PSAPP07602 524 aa13.23□□□□□ -0.29
CACNA1C-219ENST00000399649 KCNA1Q09470 495 aa13.23□□□□□ -0.29
CACNA1C-219ENST00000399649 GRAMD1BQ3KR37 738 aa13.23□□□□□ -0.29
CACNA1C-219ENST00000399649 KCTD1Q719H9 257 aa13.23□□□□□ -0.29
CACNA1C-219ENST00000399649 RMDN2Q96LZ7 410 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms