RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 RASSF4Q9H2L5 321 aa28.18■■■□□ 2.1
COL13A1-203ENST00000398969 GOLGA6AQ9NYA3 693 aa28.18■■■□□ 2.1
COL13A1-203ENST00000398969 SERPINB13Q9UIV8 391 aa28.18■■■□□ 2.1
COL13A1-203ENST00000398969 KIAA1024Q9UPX6 916 aa28.18■■■□□ 2.1
COL13A1-203ENST00000398969 ATF5Q9Y2D1 282 aaPredicted RBP28.18■■■□□ 2.1
COL13A1-203ENST00000398969 ARFGEF1Q9Y6D6 1849 aa28.18■■■□□ 2.1
COL13A1-203ENST00000398969 SHOX2O60902 331 aaPredicted RBP28.18■■■□□ 2.1
COL13A1-203ENST00000398969 STYK1Q6J9G0 422 aa28.18■■■□□ 2.1
COL13A1-203ENST00000398969 C8orf74Q6P047 294 aa28.18■■■□□ 2.1
COL13A1-203ENST00000398969 EMBQ6PCB8 327 aa28.18■■■□□ 2.1
COL13A1-203ENST00000398969 UTP18Q9Y5J1 556 aaKnown RBP eCLIP28.18■■■□□ 2.1
COL13A1-203ENST00000398969 PPFIA4O75335 1185 aa28.17■■■□□ 2.1
COL13A1-203ENST00000398969 PLA2G4BP0C869 781 aa28.17■■■□□ 2.1
COL13A1-203ENST00000398969 GPATCH4Q5T3I0 446 aaKnown RBP28.17■■■□□ 2.1
COL13A1-203ENST00000398969 CERS5Q8N5B7 392 aa28.17■■■□□ 2.1
COL13A1-203ENST00000398969 MS4A14Q96JA4 679 aa28.17■■■□□ 2.1
COL13A1-203ENST00000398969 SWAP70Q9UH65 585 aa28.17■■■□□ 2.1
COL13A1-203ENST00000398969 RSPH14Q9UHP6 348 aa28.17■■■□□ 2.1
COL13A1-203ENST00000398969 APBA1Q02410 837 aa28.17■■■□□ 2.1
COL13A1-203ENST00000398969 CFAP221Q4G0U5 840 aa28.17■■■□□ 2.1
COL13A1-203ENST00000398969 SH3GL2Q99962 352 aa28.17■■■□□ 2.1
COL13A1-203ENST00000398969 KCTD10Q9H3F6 313 aa28.17■■■□□ 2.1
COL13A1-203ENST00000398969 LUC7LQ9NQ29 371 aaKnown RBP28.17■■■□□ 2.1
COL13A1-203ENST00000398969 NPHP3-ACAD11A0A0J9YXS1 232 aa28.16■■■□□ 2.1
COL13A1-203ENST00000398969 SHMT1P34896 483 aa28.16■■■□□ 2.1
COL13A1-203ENST00000398969 NAB2Q15742 525 aa28.16■■■□□ 2.1
COL13A1-203ENST00000398969 GLE1Q53GS7 698 aaKnown RBP28.16■■■□□ 2.1
COL13A1-203ENST00000398969 KCTD1Q719H9 257 aa28.16■■■□□ 2.1
COL13A1-203ENST00000398969 GPBP1Q86WP2 473 aa28.16■■■□□ 2.1
COL13A1-203ENST00000398969 SCFD1Q8WVM8 642 aa28.16■■■□□ 2.1
COL13A1-203ENST00000398969 KANSL2Q9H9L4 492 aa28.16■■■□□ 2.1
COL13A1-203ENST00000398969 RNF14Q9UBS8 474 aa28.16■■■□□ 2.1
COL13A1-203ENST00000398969 MYO3BQ8WXR4 1341 aa28.16■■■□□ 2.1
COL13A1-203ENST00000398969 POTEB3A0JP26 581 aa28.16■■■□□ 2.1
COL13A1-203ENST00000398969 POTECB2RU33 542 aa28.16■■■□□ 2.1
COL13A1-203ENST00000398969 CACNB1Q02641 598 aaPredicted RBP28.16■■■□□ 2.1
COL13A1-203ENST00000398969 POTEBQ6S5H4 581 aa28.16■■■□□ 2.1
COL13A1-203ENST00000398969 CAVIN3Q969G5 261 aa28.16■■■□□ 2.1
COL13A1-203ENST00000398969 NAP1L4Q99733 375 aaKnown RBP28.16■■■□□ 2.1
COL13A1-203ENST00000398969 TRIM34Q9BYJ4 488 aa28.16■■■□□ 2.1
COL13A1-203ENST00000398969 F8W031 263 aaPredicted RBP28.15■■■□□ 2.1
COL13A1-203ENST00000398969 PALMO75781 387 aa28.15■■■□□ 2.1
COL13A1-203ENST00000398969 SLC18A3Q16572 532 aa28.15■■■□□ 2.1
COL13A1-203ENST00000398969 HERC4Q5GLZ8 1057 aaPredicted RBP28.15■■■□□ 2.1
COL13A1-203ENST00000398969 ZC3H3Q8IXZ2 948 aaKnown RBP28.15■■■□□ 2.1
COL13A1-203ENST00000398969 TSEN2Q8NCE0 465 aaKnown RBP28.15■■■□□ 2.1
COL13A1-203ENST00000398969 TBC1D5Q92609 795 aa28.15■■■□□ 2.1
COL13A1-203ENST00000398969 UIMC1Q96RL1 719 aa28.15■■■□□ 2.1
COL13A1-203ENST00000398969 PLEKHA4Q9H4M7 779 aa28.15■■■□□ 2.1
COL13A1-203ENST00000398969 CYP11B2P19099 503 aa28.15■■■□□ 2.1
COL13A1-203ENST00000398969 EMILIN3Q9NT22 766 aa28.15■■■□□ 2.1
COL13A1-203ENST00000398969 GOLGA8KD6RF30 607 aa28.14■■■□□ 2.1
COL13A1-203ENST00000398969 G3V3G9 751 aa28.14■■■□□ 2.1
COL13A1-203ENST00000398969 KLRC1P26715 233 aa28.14■■■□□ 2.1
COL13A1-203ENST00000398969 RAPGEF1Q13905 1077 aa28.14■■■□□ 2.1
COL13A1-203ENST00000398969 DCAF8Q5TAQ9 597 aa28.14■■■□□ 2.1
COL13A1-203ENST00000398969 CHRNA5P30532 468 aa28.13■■■□□ 2.09
COL13A1-203ENST00000398969 MXD3Q9BW11 206 aa28.13■■■□□ 2.09
COL13A1-203ENST00000398969 KCNMB3Q9NPA1 279 aa28.13■■■□□ 2.09
COL13A1-203ENST00000398969 ATAD5Q96QE3 1844 aa28.13■■■□□ 2.09
COL13A1-203ENST00000398969 USP17L15C9J2P7 530 aa28.13■■■□□ 2.09
COL13A1-203ENST00000398969 USP17L13C9JLJ4 530 aa28.13■■■□□ 2.09
COL13A1-203ENST00000398969 USP17L11C9JVI0 530 aa28.13■■■□□ 2.09
COL13A1-203ENST00000398969 USP17L18D6R9N7 530 aa28.13■■■□□ 2.09
COL13A1-203ENST00000398969 USP17L22D6RA61 530 aa28.13■■■□□ 2.09
COL13A1-203ENST00000398969 USP17L17D6RBQ6 530 aa28.13■■■□□ 2.09
COL13A1-203ENST00000398969 USP17L19D6RCP7 530 aa28.13■■■□□ 2.09
COL13A1-203ENST00000398969 USP17L20D6RJB6 530 aa28.13■■■□□ 2.09
COL13A1-203ENST00000398969 USP17L24Q0WX57 530 aa28.13■■■□□ 2.09
COL13A1-203ENST00000398969 ALS2CLQ60I27 953 aa28.13■■■□□ 2.09
COL13A1-203ENST00000398969 USP17L6PQ6QN14 398 aa28.13■■■□□ 2.09
COL13A1-203ENST00000398969 GANQ9H2C0 597 aa28.13■■■□□ 2.09
COL13A1-203ENST00000398969 AIPL1Q9NZN9 384 aa28.13■■■□□ 2.09
COL13A1-203ENST00000398969 PCDHGC5Q9Y5F6 944 aa28.13■■■□□ 2.09
COL13A1-203ENST00000398969 A0A087X0T9 212 aa28.12■■■□□ 2.09
COL13A1-203ENST00000398969 OPA1O60313 960 aa28.12■■■□□ 2.09
COL13A1-203ENST00000398969 FAM228BP0C875 321 aa28.12■■■□□ 2.09
COL13A1-203ENST00000398969 ADAM9Q13443 819 aa28.12■■■□□ 2.09
COL13A1-203ENST00000398969 USP40Q9NVE5 1235 aa28.12■■■□□ 2.09
COL13A1-203ENST00000398969 SLX4Q8IY92 1834 aa28.12■■■□□ 2.09
COL13A1-203ENST00000398969 FRMD3A2A2Y4 597 aa28.12■■■□□ 2.09
COL13A1-203ENST00000398969 MPHOSPH10O00566 681 aaKnown RBP28.12■■■□□ 2.09
COL13A1-203ENST00000398969 SLC26A4O43511 780 aa28.12■■■□□ 2.09
COL13A1-203ENST00000398969 FTCDO95954 541 aa28.12■■■□□ 2.09
COL13A1-203ENST00000398969 PPFIA1Q13136 1202 aa28.12■■■□□ 2.09
COL13A1-203ENST00000398969 GREB1LQ9C091 1923 aaPredicted RBP28.11■■■□□ 2.09
COL13A1-203ENST00000398969 ARID5AQ03989 594 aa28.11■■■□□ 2.09
COL13A1-203ENST00000398969 KLHL30Q0D2K2 578 aa28.11■■■□□ 2.09
COL13A1-203ENST00000398969 NNTQ13423 1086 aa28.11■■■□□ 2.09
COL13A1-203ENST00000398969 EDRF1Q3B7T1 1238 aa28.11■■■□□ 2.09
COL13A1-203ENST00000398969 MEI1Q5TIA1 1274 aa28.11■■■□□ 2.09
COL13A1-203ENST00000398969 PODNQ7Z5L7 613 aa28.11■■■□□ 2.09
COL13A1-203ENST00000398969 FAM133AQ8N9E0 248 aa28.11■■■□□ 2.09
COL13A1-203ENST00000398969 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP28.11■■■□□ 2.09
COL13A1-203ENST00000398969 GDF3Q9NR23 364 aa28.11■■■□□ 2.09
COL13A1-203ENST00000398969 MYH4Q9Y623 1939 aa28.11■■■□□ 2.09
COL13A1-203ENST00000398969 MED24O75448 989 aa28.11■■■□□ 2.09
COL13A1-203ENST00000398969 GLI1P08151 1106 aa28.11■■■□□ 2.09
COL13A1-203ENST00000398969 EPB41P11171 864 aaKnown RBP28.11■■■□□ 2.09
COL13A1-203ENST00000398969 ARSHQ5FYA8 562 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms