RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 SEPT8Q92599 483 aa22.14■■□□□ 1.13
COL11A2-204ENST00000395194 PSTPIP2Q9H939 334 aa22.14■■□□□ 1.13
COL11A2-204ENST00000395194 ANO2Q9NQ90 1003 aa22.14■■□□□ 1.13
COL11A2-204ENST00000395194 INSL6Q9Y581 213 aa22.14■■□□□ 1.13
COL11A2-204ENST00000395194 LOXHD1Q8IVV2 1947 aa22.14■■□□□ 1.13
COL11A2-204ENST00000395194 GNAT1P11488 350 aa22.13■■□□□ 1.13
COL11A2-204ENST00000395194 SMARCA1P28370 1054 aa22.13■■□□□ 1.13
COL11A2-204ENST00000395194 TCF7P36402 384 aaPredicted RBP22.13■■□□□ 1.13
COL11A2-204ENST00000395194 SENP7Q9BQF6 1050 aa22.13■■□□□ 1.13
COL11A2-204ENST00000395194 MTA3Q9BTC8 594 aa22.13■■□□□ 1.13
COL11A2-204ENST00000395194 SLC12A7Q9Y666 1083 aa22.13■■□□□ 1.13
COL11A2-204ENST00000395194 MARK3P27448 753 aa22.12■■□□□ 1.13
COL11A2-204ENST00000395194 HEATR3Q7Z4Q2 680 aa22.12■■□□□ 1.13
COL11A2-204ENST00000395194 TMTC2Q8N394 836 aa22.12■■□□□ 1.13
COL11A2-204ENST00000395194 FBXO22Q8NEZ5 403 aa22.12■■□□□ 1.13
COL11A2-204ENST00000395194 KCNA2P16389 499 aa22.11■■□□□ 1.13
COL11A2-204ENST00000395194 ITGB5P18084 799 aa22.11■■□□□ 1.13
COL11A2-204ENST00000395194 LIFRP42702 1097 aa22.11■■□□□ 1.13
COL11A2-204ENST00000395194 NECTIN1Q15223 517 aa22.11■■□□□ 1.13
COL11A2-204ENST00000395194 XRRA1Q6P2D8 792 aa22.11■■□□□ 1.13
COL11A2-204ENST00000395194 RUFY4Q6ZNE9 571 aa22.11■■□□□ 1.13
COL11A2-204ENST00000395194 TMTC3Q6ZXV5 915 aa22.11■■□□□ 1.13
COL11A2-204ENST00000395194 GPRASP2Q96D09 838 aa22.11■■□□□ 1.13
COL11A2-204ENST00000395194 YME1L1Q96TA2 773 aa22.11■■□□□ 1.13
COL11A2-204ENST00000395194 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.1■■□□□ 1.13
COL11A2-204ENST00000395194 SPDYE3A6NKU9 549 aa22.1■■□□□ 1.13
COL11A2-204ENST00000395194 CAND2O75155 1236 aa22.1■■□□□ 1.13
COL11A2-204ENST00000395194 CALM1P0DP23 149 aa22.1■■□□□ 1.13
COL11A2-204ENST00000395194 CALM2P0DP24 149 aa22.1■■□□□ 1.13
COL11A2-204ENST00000395194 CALM3P0DP25 149 aa22.1■■□□□ 1.13
COL11A2-204ENST00000395194 ADAM17P78536 824 aa22.1■■□□□ 1.13
COL11A2-204ENST00000395194 HTRA4P83105 476 aaPredicted RBP22.1■■□□□ 1.13
COL11A2-204ENST00000395194 PPFIA1Q13136 1202 aa22.1■■□□□ 1.13
COL11A2-204ENST00000395194 TCEANC2Q96MN5 208 aa22.1■■□□□ 1.13
COL11A2-204ENST00000395194 LMCD1Q9NZU5 365 aa22.1■■□□□ 1.13
COL11A2-204ENST00000395194 ATG2AQ2TAZ0 1938 aa22.1■■□□□ 1.13
COL11A2-204ENST00000395194 RALGAPA2Q2PPJ7 1873 aa22.09■■□□□ 1.13
COL11A2-204ENST00000395194 GSTTP1A0A1W2PQM5 241 aa22.09■■□□□ 1.13
COL11A2-204ENST00000395194 GHRP10912 638 aa22.09■■□□□ 1.13
COL11A2-204ENST00000395194 FANCBQ8NB91 859 aa22.09■■□□□ 1.13
COL11A2-204ENST00000395194 GIMAP8Q8ND71 665 aaPredicted RBP22.09■■□□□ 1.13
COL11A2-204ENST00000395194 SP7Q8TDD2 431 aaPredicted RBP22.09■■□□□ 1.13
COL11A2-204ENST00000395194 PGBD1Q96JS3 809 aa22.09■■□□□ 1.13
COL11A2-204ENST00000395194 IFIH1Q9BYX4 1025 aaKnown RBP22.09■■□□□ 1.13
COL11A2-204ENST00000395194 PCDHA6Q9UN73 950 aa22.09■■□□□ 1.13
COL11A2-204ENST00000395194 PCDHA8Q9Y5H6 950 aa22.09■■□□□ 1.13
COL11A2-204ENST00000395194 UBIAD1Q9Y5Z9 338 aa22.09■■□□□ 1.13
COL11A2-204ENST00000395194 NRCAMQ92823 1304 aa22.08■■□□□ 1.13
COL11A2-204ENST00000395194 CHRNA1P02708 482 aa22.08■■□□□ 1.13
COL11A2-204ENST00000395194 IGBP1P78318 339 aa22.08■■□□□ 1.13
COL11A2-204ENST00000395194 MTMR1Q13613 665 aa22.08■■□□□ 1.13
COL11A2-204ENST00000395194 GLG1Q92896 1179 aa22.08■■□□□ 1.13
COL11A2-204ENST00000395194 TOP1MTQ969P6 601 aa22.08■■□□□ 1.13
COL11A2-204ENST00000395194 ZBTB10Q96DT7 871 aa22.08■■□□□ 1.13
COL11A2-204ENST00000395194 CDHR1Q96JP9 859 aa22.08■■□□□ 1.13
COL11A2-204ENST00000395194 CNTNAP5Q8WYK1 1306 aa22.07■■□□□ 1.12
COL11A2-204ENST00000395194 GRIK4Q16099 956 aa22.07■■□□□ 1.12
COL11A2-204ENST00000395194 EPC2Q52LR7 807 aa22.07■■□□□ 1.12
COL11A2-204ENST00000395194 FAM26DQ5JW98 314 aa22.07■■□□□ 1.12
COL11A2-204ENST00000395194 WWC2Q6AWC2 1192 aa22.07■■□□□ 1.12
COL11A2-204ENST00000395194 SEPT1Q8WYJ6 367 aa22.07■■□□□ 1.12
COL11A2-204ENST00000395194 UBE2ZQ9H832 354 aaPredicted RBP22.07■■□□□ 1.12
COL11A2-204ENST00000395194 TUBE1Q9UJT0 475 aa22.07■■□□□ 1.12
COL11A2-204ENST00000395194 SYNE3Q6ZMZ3 975 aa22.06■■□□□ 1.12
COL11A2-204ENST00000395194 SGMS1Q86VZ5 419 aa22.06■■□□□ 1.12
COL11A2-204ENST00000395194 DNAJB3Q8WWF6 145 aa22.06■■□□□ 1.12
COL11A2-204ENST00000395194 APBB2Q92870 758 aa22.06■■□□□ 1.12
COL11A2-204ENST00000395194 JADE2Q9NQC1 790 aa22.06■■□□□ 1.12
COL11A2-204ENST00000395194 ERAP1Q9NZ08 941 aa22.06■■□□□ 1.12
COL11A2-204ENST00000395194 KCNA5P22460 613 aa22.05■■□□□ 1.12
COL11A2-204ENST00000395194 NAPAP54920 295 aa22.05■■□□□ 1.12
COL11A2-204ENST00000395194 TYW1BQ6NUM6 668 aa22.05■■□□□ 1.12
COL11A2-204ENST00000395194 APOA5Q6Q788 366 aa22.05■■□□□ 1.12
COL11A2-204ENST00000395194 CYP2W1Q8TAV3 490 aa22.05■■□□□ 1.12
COL11A2-204ENST00000395194 EPHX3Q9H6B9 360 aa22.05■■□□□ 1.12
COL11A2-204ENST00000395194 TTC3P53804 2025 aa22.05■■□□□ 1.12
COL11A2-204ENST00000395194 MGAT3Q09327 533 aa22.04■■□□□ 1.12
COL11A2-204ENST00000395194 GPM6BQ13491 265 aa22.04■■□□□ 1.12
COL11A2-204ENST00000395194 LPIN1Q14693 890 aa22.04■■□□□ 1.12
COL11A2-204ENST00000395194 TAF2Q6P1X5 1199 aa22.04■■□□□ 1.12
COL11A2-204ENST00000395194 TMEM192Q8IY95 271 aa22.04■■□□□ 1.12
COL11A2-204ENST00000395194 MRPL38Q96DV4 380 aaKnown RBP22.04■■□□□ 1.12
COL11A2-204ENST00000395194 NEK1Q96PY6 1258 aa22.04■■□□□ 1.12
COL11A2-204ENST00000395194 PCYT2Q99447 389 aa22.04■■□□□ 1.12
COL11A2-204ENST00000395194 FAM49AQ9H0Q0 323 aaPredicted RBP22.04■■□□□ 1.12
COL11A2-204ENST00000395194 SMARCAD1Q9H4L7 1026 aa22.04■■□□□ 1.12
COL11A2-204ENST00000395194 EHMT1Q9H9B1 1298 aa22.04■■□□□ 1.12
COL11A2-204ENST00000395194 JPH1Q9HDC5 661 aaPredicted RBP22.04■■□□□ 1.12
COL11A2-204ENST00000395194 EVPLQ92817 2033 aa22.03■■□□□ 1.12
COL11A2-204ENST00000395194 RTN1Q16799 776 aa22.03■■□□□ 1.12
COL11A2-204ENST00000395194 MARCH8Q5T0T0 291 aa22.03■■□□□ 1.12
COL11A2-204ENST00000395194 RNF20Q5VTR2 975 aa22.03■■□□□ 1.12
COL11A2-204ENST00000395194 RSPH3Q86UC2 560 aa22.03■■□□□ 1.12
COL11A2-204ENST00000395194 TRAPPC12Q8WVT3 735 aa22.03■■□□□ 1.12
COL11A2-204ENST00000395194 SAMD11Q96NU1 681 aa22.03■■□□□ 1.12
COL11A2-204ENST00000395194 KCNH7Q9NS40 1196 aa22.03■■□□□ 1.12
COL11A2-204ENST00000395194 SLC9A2Q9UBY0 812 aa22.03■■□□□ 1.12
COL11A2-204ENST00000395194 BRPF3Q9ULD4 1205 aa22.03■■□□□ 1.12
COL11A2-204ENST00000395194 CDY2AQ9Y6F7 541 aa22.03■■□□□ 1.12
COL11A2-204ENST00000395194 COL4A6Q14031 1691 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms