RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 OCA2Q04671 838 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 SNCBQ16143 134 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 IMPG1Q17R60 797 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 CYP26B1Q9NR63 512 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 SENP1Q9P0U3 644 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 MAPK8IP1Q9UQF2 711 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 E5RI56 91 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 GTF2IP78347 998 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 CAPRIN1Q14444 709 aaKnown RBP8□□□□□ -1.13
SYNE2-205ENST00000394768 VEPH1Q14D04 833 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 SGO2Q562F6 1265 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 FAM26FQ5R3K3 315 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 DARS2Q6PI48 645 aaKnown RBP8□□□□□ -1.13
SYNE2-205ENST00000394768 SZRD1Q7Z422 152 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 ERICH1Q86X53 443 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 CCDC197Q8NCU1 140 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 IFT43Q96FT9 208 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 ZFP42Q96MM3 310 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 PRIM1P49642 420 aaKnown RBP8□□□□□ -1.13
SYNE2-205ENST00000394768 CENPUQ71F23 418 aa8□□□□□ -1.13
SYNE2-205ENST00000394768 BUD13Q9BRD0 619 aaKnown RBP eCLIP8□□□□□ -1.135e-6■■■□□ 16.3
SYNE2-205ENST00000394768 ZNF75DP51815 510 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 POLA2Q14181 598 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 TEX9Q8N6V9 391 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 LARP4BQ92615 738 aaKnown RBP7.99□□□□□ -1.13
SYNE2-205ENST00000394768 SYNJ2BP-COX16A0A087WUM0 186 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 EFCAB8A8MWE9 144 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 DCTN3O75935 186 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 CAV1Q03135 178 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 MXD4Q14582 209 aaPredicted RBP7.99□□□□□ -1.13
SYNE2-205ENST00000394768 KRT40Q6A162 431 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 UTP6Q9NYH9 597 aaKnown RBP7.99□□□□□ -1.13
SYNE2-205ENST00000394768 RGL1Q9NZL6 768 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 COX16Q9P0S2 106 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 FNDC3AQ9Y2H6 1198 aaKnown RBP7.99□□□□□ -1.13
SYNE2-205ENST00000394768 DENND3A2RUS2 1198 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 KRT38O76015 456 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 MTHFSDQ2M296 383 aaKnown RBP7.99□□□□□ -1.13
SYNE2-205ENST00000394768 TRIM68Q6AZZ1 485 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 ITPRIPL1Q6GPH6 555 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 ACRBPQ8NEB7 543 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 ZHX1Q9UKY1 873 aaPredicted RBP7.99□□□□□ -1.13
SYNE2-205ENST00000394768 PCDHGB4Q9UN71 923 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 ZW10O43264 779 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 APOA4P06727 396 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 RLBP1P12271 317 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 PI4K2BQ8TCG2 481 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 TMEM232C9JQI7 657 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 PGRMC1O00264 195 aaKnown RBP7.99□□□□□ -1.13
SYNE2-205ENST00000394768 SLC12A1Q13621 1099 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 RDH13Q8NBN7 331 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 SLC26A7Q8TE54 656 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 AFPP02771 609 aaKnown RBP7.99□□□□□ -1.13
SYNE2-205ENST00000394768 MCF2P10911 925 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 ARL4DP49703 201 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 RBM6P78332 1123 aaKnown RBP7.99□□□□□ -1.13
SYNE2-205ENST00000394768 ACAD11Q709F0 780 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 CRLF3Q8IUI8 442 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 ACTR5Q9H9F9 607 aaPredicted RBP7.99□□□□□ -1.13
SYNE2-205ENST00000394768 INTS9Q9NV88 658 aaKnown RBP7.99□□□□□ -1.13
SYNE2-205ENST00000394768 INSRP06213 1382 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 PPEF1O14829 653 aaPredicted RBP7.99□□□□□ -1.13
SYNE2-205ENST00000394768 KIF19Q2TAC6 998 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 EML4Q9HC35 981 aaKnown RBP7.99□□□□□ -1.13
SYNE2-205ENST00000394768 NLRC4Q9NPP4 1024 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 GCC2Q8IWJ2 1684 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 E2F6O75461 281 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 ATP5HO75947 161 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 TRADDQ15628 312 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 ALS2CLQ60I27 953 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 SLFN13Q68D06 897 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 KIF28PB7ZC32 967 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 BBOX1O75936 387 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 ZBED1O96006 694 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 CALB1P05937 261 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 TFAMQ00059 246 aaKnown RBP7.99□□□□□ -1.13
SYNE2-205ENST00000394768 CUL1Q13616 776 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 CCDC127Q96BQ5 260 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 PARVGQ9HBI0 331 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 SEL1LQ9UBV2 794 aa7.99□□□□□ -1.13
SYNE2-205ENST00000394768 IKBKBO14920 756 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 SERPINI2O75830 405 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 PYGMP11217 842 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 ULK4Q96C45 1275 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 SFMBT1Q9UHJ3 866 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.98□□□□□ -1.13
SYNE2-205ENST00000394768 ALDH1A1P00352 501 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 NR2F2P24468 414 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 PHKA2P46019 1235 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 CC2D1AQ6P1N0 951 aaPredicted RBP7.98□□□□□ -1.13
SYNE2-205ENST00000394768 SH3KBP1Q96B97 665 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 ING2Q9H160 280 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 TRAPPC3O43617 180 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 ANP32DO95626 131 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 HSPD1P10809 573 aaKnown RBP7.98□□□□□ -1.13
SYNE2-205ENST00000394768 BRAFP15056 766 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 GCKP35557 465 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 TECP42680 631 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 GTF2H3Q13889 308 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 PLEKHM2Q8IWE5 1019 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms