RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 NLRC4Q9NPP4 1024 aa13.59□□□□□ -0.23
RFC5-201ENST00000392542 HYOU1Q9Y4L1 999 aa13.59□□□□□ -0.23
RFC5-201ENST00000392542 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.59□□□□□ -0.23
RFC5-201ENST00000392542 F5H6K3 240 aa13.58□□□□□ -0.24
RFC5-201ENST00000392542 RBAK-RBAKDNI3L0D1 243 aa13.58□□□□□ -0.24
RFC5-201ENST00000392542 N4BP1O75113 896 aaKnown RBP13.58□□□□□ -0.24
RFC5-201ENST00000392542 SERPING1P05155 500 aa13.58□□□□□ -0.24
RFC5-201ENST00000392542 ITIH3Q06033 890 aa13.58□□□□□ -0.24
RFC5-201ENST00000392542 GFPT1Q06210 699 aaPredicted RBP13.58□□□□□ -0.24
RFC5-201ENST00000392542 KLRC3Q07444 240 aa13.58□□□□□ -0.24
RFC5-201ENST00000392542 EDRF1Q3B7T1 1238 aa13.58□□□□□ -0.24
RFC5-201ENST00000392542 SLC9C1Q4G0N8 1177 aa13.58□□□□□ -0.24
RFC5-201ENST00000392542 PRR16Q569H4 304 aa13.58□□□□□ -0.24
RFC5-201ENST00000392542 TDRD12Q587J7 1177 aaKnown RBP13.58□□□□□ -0.24
RFC5-201ENST00000392542 FBXO11Q86XK2 927 aa13.58□□□□□ -0.24
RFC5-201ENST00000392542 MMGT1Q8N4V1 131 aa13.58□□□□□ -0.24
RFC5-201ENST00000392542 ERMNQ8TAM6 284 aa13.58□□□□□ -0.24
RFC5-201ENST00000392542 FAM71BQ8TC56 605 aa13.58□□□□□ -0.24
RFC5-201ENST00000392542 GMCL1Q96IK5 515 aa13.58□□□□□ -0.24
RFC5-201ENST00000392542 VPS18Q9P253 973 aa13.58□□□□□ -0.24
RFC5-201ENST00000392542 TCP1P17987 556 aaKnown RBP13.58□□□□□ -0.24
RFC5-201ENST00000392542 MMP14P50281 582 aa13.58□□□□□ -0.24
RFC5-201ENST00000392542 RAD51AP2Q09MP3 1159 aa13.58□□□□□ -0.24
RFC5-201ENST00000392542 SYDE2Q5VT97 1194 aa13.58□□□□□ -0.24
RFC5-201ENST00000392542 CATSPER3Q86XQ3 398 aa13.58□□□□□ -0.24
RFC5-201ENST00000392542 ZNF622Q969S3 477 aaKnown RBP eCLIP13.58□□□□□ -0.242e-10■□□□□ 11.3
RFC5-201ENST00000392542 DRC1Q96MC2 740 aa13.58□□□□□ -0.24
RFC5-201ENST00000392542 OSBPL9Q96SU4 736 aa13.58□□□□□ -0.24
RFC5-201ENST00000392542 CALCOCO1Q9P1Z2 691 aa13.58□□□□□ -0.24
RFC5-201ENST00000392542 CETN3O15182 167 aa13.57□□□□□ -0.24
RFC5-201ENST00000392542 ECE2O60344 883 aa13.57□□□□□ -0.24
RFC5-201ENST00000392542 TLR2O60603 784 aa13.57□□□□□ -0.24
RFC5-201ENST00000392542 GDF11O95390 407 aa13.57□□□□□ -0.24
RFC5-201ENST00000392542 NDUFB10O96000 172 aa13.57□□□□□ -0.24
RFC5-201ENST00000392542 FOSP01100 380 aaPredicted RBP13.57□□□□□ -0.24
RFC5-201ENST00000392542 MMP10P09238 476 aa13.57□□□□□ -0.24
RFC5-201ENST00000392542 SREBF1P36956 1147 aa13.57□□□□□ -0.24
RFC5-201ENST00000392542 SNAP25P60880 206 aa13.57□□□□□ -0.24
RFC5-201ENST00000392542 RASSF7Q02833 373 aa13.57□□□□□ -0.24
RFC5-201ENST00000392542 ADAM9Q13443 819 aa13.57□□□□□ -0.24
RFC5-201ENST00000392542 ABCB5Q2M3G0 1257 aa13.57□□□□□ -0.24
RFC5-201ENST00000392542 HSP90B2PQ58FF3 399 aa13.57□□□□□ -0.24
RFC5-201ENST00000392542 CCDC70Q6NSX1 233 aa13.57□□□□□ -0.24
RFC5-201ENST00000392542 RNF10Q8N5U6 811 aaKnown RBP13.57□□□□□ -0.24
RFC5-201ENST00000392542 CCDC102AQ96A19 550 aa13.57□□□□□ -0.24
RFC5-201ENST00000392542 AKT1S1Q96B36 256 aa13.57□□□□□ -0.24
RFC5-201ENST00000392542 LENG9Q96B70 501 aa13.57□□□□□ -0.24
RFC5-201ENST00000392542 MED4Q9NPJ6 270 aa13.57□□□□□ -0.24
RFC5-201ENST00000392542 SALL4Q9UJQ4 1053 aa13.57□□□□□ -0.24
RFC5-201ENST00000392542 FAN1Q9Y2M0 1017 aa13.57□□□□□ -0.24
RFC5-201ENST00000392542 STK24Q9Y6E0 443 aa13.57□□□□□ -0.24
RFC5-201ENST00000392542 SPDYE3A6NKU9 549 aa13.56□□□□□ -0.24
RFC5-201ENST00000392542 RPA1P27694 616 aa13.56□□□□□ -0.24
RFC5-201ENST00000392542 TNNT3P45378 269 aaPredicted RBP13.56□□□□□ -0.24
RFC5-201ENST00000392542 POLR2FP61218 127 aaKnown RBP13.56□□□□□ -0.24
RFC5-201ENST00000392542 GIT2Q14161 759 aa13.56□□□□□ -0.24
RFC5-201ENST00000392542 CCNI2Q6ZMN8 369 aaPredicted RBP13.56□□□□□ -0.24
RFC5-201ENST00000392542 SYT2Q8N9I0 419 aaPredicted RBP13.56□□□□□ -0.24
RFC5-201ENST00000392542 COG1Q8WTW3 980 aa13.56□□□□□ -0.24
RFC5-201ENST00000392542 NOX5Q96PH1 765 aa13.56□□□□□ -0.24
RFC5-201ENST00000392542 ZHX3Q9H4I2 956 aa13.56□□□□□ -0.24
RFC5-201ENST00000392542 SERPINA10Q9UK55 444 aa13.56□□□□□ -0.24
RFC5-201ENST00000392542 DNM3Q9UQ16 869 aa13.56□□□□□ -0.24
RFC5-201ENST00000392542 SPATA31C1P0DKV0 1188 aa13.56□□□□□ -0.24
RFC5-201ENST00000392542 AARSP49588 968 aaKnown RBP eCLIP13.56□□□□□ -0.24
RFC5-201ENST00000392542 USH1GQ495M9 461 aa13.56□□□□□ -0.24
RFC5-201ENST00000392542 NFRKBQ6P4R8 1299 aa13.56□□□□□ -0.24
RFC5-201ENST00000392542 RUBCNQ92622 972 aa13.56□□□□□ -0.24
RFC5-201ENST00000392542 FAM20AQ96MK3 541 aa13.56□□□□□ -0.24
RFC5-201ENST00000392542 CRACR2AQ9BSW2 395 aa13.56□□□□□ -0.24
RFC5-201ENST00000392542 GANQ9H2C0 597 aa13.56□□□□□ -0.24
RFC5-201ENST00000392542 LUC7LQ9NQ29 371 aaKnown RBP13.56□□□□□ -0.24
RFC5-201ENST00000392542 FAM86B1E9PN63 330 aa13.55□□□□□ -0.24
RFC5-201ENST00000392542 FAM86B2P0C5J1 330 aa13.55□□□□□ -0.24
RFC5-201ENST00000392542 BMP3P12645 472 aa13.55□□□□□ -0.24
RFC5-201ENST00000392542 CIITAP33076 1130 aa13.55□□□□□ -0.24
RFC5-201ENST00000392542 PSMC6P62333 389 aa13.55□□□□□ -0.24
RFC5-201ENST00000392542 IKQ13123 557 aaPredicted RBP13.55□□□□□ -0.24
RFC5-201ENST00000392542 ANKRD13CQ8N6S4 541 aa13.55□□□□□ -0.24
RFC5-201ENST00000392542 HPCAL4Q9UM19 191 aa13.55□□□□□ -0.24
RFC5-201ENST00000392542 TRAF3IP3Q9Y228 551 aa13.55□□□□□ -0.24
RFC5-201ENST00000392542 KIF13BQ9NQT8 1826 aa13.55□□□□□ -0.24
RFC5-201ENST00000392542 SLX4Q8IY92 1834 aa13.55□□□□□ -0.24
RFC5-201ENST00000392542 MEIS1O00470 390 aa13.55□□□□□ -0.24
RFC5-201ENST00000392542 ZMYND10O75800 440 aa13.55□□□□□ -0.24
RFC5-201ENST00000392542 NR2F2P24468 414 aa13.55□□□□□ -0.24
RFC5-201ENST00000392542 HSPA1LP34931 641 aa13.55□□□□□ -0.24
RFC5-201ENST00000392542 EPS15P42566 896 aa13.55□□□□□ -0.24
RFC5-201ENST00000392542 LMAN1P49257 510 aa13.55□□□□□ -0.24
RFC5-201ENST00000392542 CASP5P51878 434 aa13.55□□□□□ -0.24
RFC5-201ENST00000392542 KCNH2Q12809 1159 aa13.55□□□□□ -0.24
RFC5-201ENST00000392542 PABPC4Q13310 644 aaKnown RBP eCLIP13.55□□□□□ -0.242e-11■■■■■ 27.7
RFC5-201ENST00000392542 RAPGEF1Q13905 1077 aa13.55□□□□□ -0.24
RFC5-201ENST00000392542 KLHDC7AQ5VTJ3 777 aa13.55□□□□□ -0.24
RFC5-201ENST00000392542 BTNL9Q6UXG8 535 aa13.55□□□□□ -0.24
RFC5-201ENST00000392542 EPM2AIP1Q7L775 607 aaPredicted RBP13.55□□□□□ -0.24
RFC5-201ENST00000392542 SPATA4Q8NEY3 305 aa13.55□□□□□ -0.24
RFC5-201ENST00000392542 REEP2Q9BRK0 252 aa13.55□□□□□ -0.24
RFC5-201ENST00000392542 TSKSQ9UJT2 592 aa13.55□□□□□ -0.24
RFC5-201ENST00000392542 ATRNL1Q5VV63 1379 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms