RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 TRPM4Q8TD43 1214 aa15.31■□□□□ 0.04
NEK4-202ENST00000383721 TRERF1Q96PN7 1200 aa15.31■□□□□ 0.04
NEK4-202ENST00000383721 FAM204AQ9H8W3 233 aa15.31■□□□□ 0.04
NEK4-202ENST00000383721 ASTN2O75129 1339 aaPredicted RBP15.31■□□□□ 0.04
NEK4-202ENST00000383721 HOXA7P31268 230 aaPredicted RBP15.31■□□□□ 0.04
NEK4-202ENST00000383721 SLC16A2P36021 539 aa15.31■□□□□ 0.04
NEK4-202ENST00000383721 CACNB3P54284 484 aa15.31■□□□□ 0.04
NEK4-202ENST00000383721 HGSNATQ68CP4 663 aa15.31■□□□□ 0.04
NEK4-202ENST00000383721 HHIPL2Q6UWX4 724 aa15.31■□□□□ 0.04
NEK4-202ENST00000383721 SELENOOQ9BVL4 669 aa15.31■□□□□ 0.04
NEK4-202ENST00000383721 FGFBP2Q9BYJ0 223 aa15.31■□□□□ 0.04
NEK4-202ENST00000383721 HDAC9Q9UKV0 1011 aa15.31■□□□□ 0.04
NEK4-202ENST00000383721 SCAF8Q9UPN6 1271 aaKnown RBP15.31■□□□□ 0.04
NEK4-202ENST00000383721 POTECB2RU33 542 aa15.3■□□□□ 0.04
NEK4-202ENST00000383721 PJA2O43164 708 aa15.3■□□□□ 0.04
NEK4-202ENST00000383721 GFPT1Q06210 699 aaPredicted RBP15.3■□□□□ 0.04
NEK4-202ENST00000383721 NFRKBQ6P4R8 1299 aa15.3■□□□□ 0.04
NEK4-202ENST00000383721 ANKRD13CQ8N6S4 541 aa15.3■□□□□ 0.04
NEK4-202ENST00000383721 HDAC7Q8WUI4 952 aa15.3■□□□□ 0.04
NEK4-202ENST00000383721 CUL5Q93034 780 aa15.3■□□□□ 0.04
NEK4-202ENST00000383721 ZDHHC15Q96MV8 337 aa15.3■□□□□ 0.04
NEK4-202ENST00000383721 OSBPL9Q96SU4 736 aa15.3■□□□□ 0.04
NEK4-202ENST00000383721 HINFPQ9BQA5 517 aa15.3■□□□□ 0.04
NEK4-202ENST00000383721 EDEM3Q9BZQ6 932 aa15.3■□□□□ 0.04
NEK4-202ENST00000383721 TANGO6Q9C0B7 1094 aa15.3■□□□□ 0.04
NEK4-202ENST00000383721 COL4A3BPQ9Y5P4 624 aa15.3■□□□□ 0.04
NEK4-202ENST00000383721 USP17L10C9JJH3 530 aa15.3■□□□□ 0.04
NEK4-202ENST00000383721 SHMT1P34896 483 aa15.3■□□□□ 0.04
NEK4-202ENST00000383721 IRX5P78411 483 aaPredicted RBP15.3■□□□□ 0.04
NEK4-202ENST00000383721 FKBP3Q00688 224 aaKnown RBP15.3■□□□□ 0.04
NEK4-202ENST00000383721 ITIH3Q06033 890 aa15.3■□□□□ 0.04
NEK4-202ENST00000383721 FAM26FQ5R3K3 315 aa15.3■□□□□ 0.04
NEK4-202ENST00000383721 CACNA2D4Q7Z3S7 1137 aa15.3■□□□□ 0.04
NEK4-202ENST00000383721 SPATA4Q8NEY3 305 aa15.3■□□□□ 0.04
NEK4-202ENST00000383721 RIN2Q8WYP3 895 aaPredicted RBP15.3■□□□□ 0.04
NEK4-202ENST00000383721 LRRC1Q9BTT6 524 aa15.3■□□□□ 0.04
NEK4-202ENST00000383721 TDRD3Q9H7E2 651 aaKnown RBP15.3■□□□□ 0.04
NEK4-202ENST00000383721 PANK4Q9NVE7 773 aa15.3■□□□□ 0.04
NEK4-202ENST00000383721 SERPINB13Q9UIV8 391 aa15.3■□□□□ 0.04
NEK4-202ENST00000383721 PCDHA12Q9UN75 941 aa15.3■□□□□ 0.04
NEK4-202ENST00000383721 SPDYE2BA6NHP3 402 aa15.29■□□□□ 0.04
NEK4-202ENST00000383721 TRAF5O00463 557 aa15.29■□□□□ 0.04
NEK4-202ENST00000383721 WNT10BO00744 389 aa15.29■□□□□ 0.04
NEK4-202ENST00000383721 NOL4O94818 638 aa15.29■□□□□ 0.04
NEK4-202ENST00000383721 SPDYE6P0CI01 402 aa15.29■□□□□ 0.04
NEK4-202ENST00000383721 CXCR5P32302 372 aa15.29■□□□□ 0.04
NEK4-202ENST00000383721 MRPL12P52815 198 aaKnown RBP15.29■□□□□ 0.04
NEK4-202ENST00000383721 HDLBPQ00341 1268 aaKnown RBP15.29■□□□□ 0.04
NEK4-202ENST00000383721 MAPK8IP2Q13387 824 aaPredicted RBP15.29■□□□□ 0.04
NEK4-202ENST00000383721 SEPT2Q15019 361 aa15.29■□□□□ 0.04
NEK4-202ENST00000383721 DLGAP5Q15398 846 aa15.29■□□□□ 0.04
NEK4-202ENST00000383721 HYIQ5T013 277 aa15.29■□□□□ 0.04
NEK4-202ENST00000383721 CDC42EP5Q6NZY7 148 aa15.29■□□□□ 0.04
NEK4-202ENST00000383721 LEKR1Q6ZMV7 388 aa15.29■□□□□ 0.04
NEK4-202ENST00000383721 MTMR8Q96EF0 704 aa15.29■□□□□ 0.04
NEK4-202ENST00000383721 L3MBTL3Q96JM7 780 aaPredicted RBP15.29■□□□□ 0.04
NEK4-202ENST00000383721 PSMB7Q99436 277 aa15.29■□□□□ 0.04
NEK4-202ENST00000383721 SMARCAL1Q9NZC9 954 aa15.29■□□□□ 0.04
NEK4-202ENST00000383721 DMGDHQ9UI17 866 aaKnown RBP15.29■□□□□ 0.04
NEK4-202ENST00000383721 HYOU1Q9Y4L1 999 aa15.29■□□□□ 0.04
NEK4-202ENST00000383721 SSU72P8A0A1W2PR75 194 aa15.29■□□□□ 0.04
NEK4-202ENST00000383721 CLRN2A0PK11 232 aa15.29■□□□□ 0.04
NEK4-202ENST00000383721 AGPSO00116 658 aa15.29■□□□□ 0.04
NEK4-202ENST00000383721 NCK2O43639 380 aa15.29■□□□□ 0.04
NEK4-202ENST00000383721 TLR2O60603 784 aa15.29■□□□□ 0.04
NEK4-202ENST00000383721 SSBP05455 408 aaKnown RBP eCLIP15.29■□□□□ 0.04
NEK4-202ENST00000383721 TCP1P17987 556 aaKnown RBP15.29■□□□□ 0.04
NEK4-202ENST00000383721 SLC1A4P43007 532 aa15.29■□□□□ 0.04
NEK4-202ENST00000383721 HIRAP54198 1017 aaPredicted RBP15.29■□□□□ 0.04
NEK4-202ENST00000383721 KCTD1Q719H9 257 aa15.29■□□□□ 0.04
NEK4-202ENST00000383721 AENQ8WTP8 325 aaKnown RBP15.29■□□□□ 0.04
NEK4-202ENST00000383721 ALS2CR12Q96Q35 445 aa15.29■□□□□ 0.04
NEK4-202ENST00000383721 UIMC1Q96RL1 719 aa15.29■□□□□ 0.04
NEK4-202ENST00000383721 MRIQ9BWK5 157 aa15.29■□□□□ 0.04
NEK4-202ENST00000383721 PSTPIP2Q9H939 334 aa15.29■□□□□ 0.04
NEK4-202ENST00000383721 NLRC4Q9NPP4 1024 aa15.29■□□□□ 0.04
NEK4-202ENST00000383721 EHD2Q9NZN4 543 aa15.29■□□□□ 0.04
NEK4-202ENST00000383721 TBC1D7Q9P0N9 293 aa15.29■□□□□ 0.04
NEK4-202ENST00000383721 E9PMD0 336 aa15.28■□□□□ 0.04
NEK4-202ENST00000383721 ZBTB5O15062 677 aa15.28■□□□□ 0.04
NEK4-202ENST00000383721 MARCH6O60337 910 aa15.28■□□□□ 0.04
NEK4-202ENST00000383721 RPS6KA5O75582 802 aa15.28■□□□□ 0.04
NEK4-202ENST00000383721 GGCXP38435 758 aa15.28■□□□□ 0.04
NEK4-202ENST00000383721 CCDC40Q4G0X9 1142 aa15.28■□□□□ 0.04
NEK4-202ENST00000383721 ZBED3Q96IU2 234 aaPredicted RBP15.28■□□□□ 0.04
NEK4-202ENST00000383721 TLR10Q9BXR5 811 aa15.28■□□□□ 0.04
NEK4-202ENST00000383721 USP40Q9NVE5 1235 aa15.28■□□□□ 0.04
NEK4-202ENST00000383721 PCDHA2Q9Y5H9 948 aa15.28■□□□□ 0.04
NEK4-202ENST00000383721 SLURP2P0DP57 97 aa15.28■□□□□ 0.04
NEK4-202ENST00000383721 GCFC2P16383 781 aaKnown RBP15.28■□□□□ 0.04
NEK4-202ENST00000383721 MRPS25P82663 173 aaKnown RBP15.28■□□□□ 0.04
NEK4-202ENST00000383721 GPATCH4Q5T3I0 446 aaKnown RBP15.28■□□□□ 0.04
NEK4-202ENST00000383721 CWC15Q9P013 229 aaKnown RBP15.28■□□□□ 0.04
NEK4-202ENST00000383721 CEP72Q9P209 647 aa15.28■□□□□ 0.04
NEK4-202ENST00000383721 SWAP70Q9UH65 585 aa15.28■□□□□ 0.04
NEK4-202ENST00000383721 FAM184BQ9ULE4 1060 aa15.28■□□□□ 0.04
NEK4-202ENST00000383721 KIAA1024Q9UPX6 916 aa15.28■□□□□ 0.04
NEK4-202ENST00000383721 NPHP3-ACAD11A0A0J9YXS1 232 aa15.27■□□□□ 0.04
NEK4-202ENST00000383721 RBAK-RBAKDNI3L0D1 243 aa15.27■□□□□ 0.04
NEK4-202ENST00000383721 NFIAQ12857 509 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms