RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 ZDHHC9Q9Y397 364 aa17.01■□□□□ 0.31
LMO4-201ENST00000370542 GOLGA6L6A8MZA4 724 aa17■□□□□ 0.31
LMO4-201ENST00000370542 PIK3CDO00329 1044 aa17■□□□□ 0.31
LMO4-201ENST00000370542 STAM2O75886 525 aa17■□□□□ 0.31
LMO4-201ENST00000370542 BAIAP3O94812 1187 aa17■□□□□ 0.31
LMO4-201ENST00000370542 ACTN1P12814 892 aa17■□□□□ 0.31
LMO4-201ENST00000370542 POU3F3P20264 500 aaPredicted RBP17■□□□□ 0.31
LMO4-201ENST00000370542 HOXC8P31273 242 aa17■□□□□ 0.31
LMO4-201ENST00000370542 LIFRP42702 1097 aa17■□□□□ 0.31
LMO4-201ENST00000370542 RABGGTBP53611 331 aa17■□□□□ 0.31
LMO4-201ENST00000370542 MRPS9P82933 396 aaKnown RBP17■□□□□ 0.31
LMO4-201ENST00000370542 NECTIN1Q15223 517 aa17■□□□□ 0.31
LMO4-201ENST00000370542 TRIM71Q2Q1W2 868 aaKnown RBP17■□□□□ 0.31
LMO4-201ENST00000370542 HSDL1Q3SXM5 330 aa17■□□□□ 0.31
LMO4-201ENST00000370542 DNTTIP2Q5QJE6 756 aaKnown RBP17■□□□□ 0.31
LMO4-201ENST00000370542 TRAF7Q6Q0C0 670 aa17■□□□□ 0.31
LMO4-201ENST00000370542 DEFB128Q7Z7B8 93 aa17■□□□□ 0.31
LMO4-201ENST00000370542 ZNF654Q8IZM8 581 aa17■□□□□ 0.31
LMO4-201ENST00000370542 TMTC2Q8N394 836 aa17■□□□□ 0.31
LMO4-201ENST00000370542 CCDC155Q8N6L0 562 aa17■□□□□ 0.31
LMO4-201ENST00000370542 INPP4AQ96PE3 977 aaPredicted RBP17■□□□□ 0.31
LMO4-201ENST00000370542 HDAC6Q9UBN7 1215 aa17■□□□□ 0.31
LMO4-201ENST00000370542 MYCLP12524 364 aaPredicted RBP16.99■□□□□ 0.31
LMO4-201ENST00000370542 SELPP16109 830 aa16.99■□□□□ 0.31
LMO4-201ENST00000370542 UBA1P22314 1058 aaKnown RBP16.99■□□□□ 0.31
LMO4-201ENST00000370542 CCND2P30279 289 aa16.99■□□□□ 0.31
LMO4-201ENST00000370542 PTK7Q13308 1070 aa16.99■□□□□ 0.31
LMO4-201ENST00000370542 COL9A3Q14050 684 aaPredicted RBP16.99■□□□□ 0.31
LMO4-201ENST00000370542 MFSD10Q14728 455 aa16.99■□□□□ 0.31
LMO4-201ENST00000370542 KIAA0753Q2KHM9 967 aa16.99■□□□□ 0.31
LMO4-201ENST00000370542 CCDC183Q5T5S1 534 aa16.99■□□□□ 0.31
LMO4-201ENST00000370542 TMEM87BQ96K49 555 aa16.99■□□□□ 0.31
LMO4-201ENST00000370542 LZTS2Q9BRK4 669 aa16.99■□□□□ 0.31
LMO4-201ENST00000370542 ESYT1Q9BSJ8 1104 aa16.99■□□□□ 0.31
LMO4-201ENST00000370542 C16orf70Q9BSU1 422 aa16.99■□□□□ 0.31
LMO4-201ENST00000370542 NOD1Q9Y239 953 aa16.99■□□□□ 0.31
LMO4-201ENST00000370542 KIF3AQ9Y496 699 aa16.99■□□□□ 0.31
LMO4-201ENST00000370542 ATP6V1DQ9Y5K8 247 aa16.99■□□□□ 0.31
LMO4-201ENST00000370542 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.99■□□□□ 0.31
LMO4-201ENST00000370542 WDFY4Q6ZS81 3184 aa16.99■□□□□ 0.31
LMO4-201ENST00000370542 ZBBXA8MT70 800 aa16.98■□□□□ 0.31
LMO4-201ENST00000370542 SH2B2O14492 632 aaPredicted RBP16.98■□□□□ 0.31
LMO4-201ENST00000370542 MEIS2O14770 477 aa16.98■□□□□ 0.31
LMO4-201ENST00000370542 GGPS1O95749 300 aa16.98■□□□□ 0.31
LMO4-201ENST00000370542 CKBP12277 381 aa16.98■□□□□ 0.31
LMO4-201ENST00000370542 MYOGP15173 224 aa16.98■□□□□ 0.31
LMO4-201ENST00000370542 SEMA3FQ13275 785 aa16.98■□□□□ 0.31
LMO4-201ENST00000370542 HIC1Q14526 733 aa16.98■□□□□ 0.31
LMO4-201ENST00000370542 NOLC1Q14978 699 aaKnown RBP eCLIP16.98■□□□□ 0.31
LMO4-201ENST00000370542 SYCP1Q15431 976 aa16.98■□□□□ 0.31
LMO4-201ENST00000370542 GPKOWQ92917 476 aaPredicted RBP eCLIP16.98■□□□□ 0.31
LMO4-201ENST00000370542 SPATA31C2B4DYI2 1134 aa16.97■□□□□ 0.31
LMO4-201ENST00000370542 SLC27A2O14975 620 aa16.97■□□□□ 0.31
LMO4-201ENST00000370542 PRC1O43663 620 aa16.97■□□□□ 0.31
LMO4-201ENST00000370542 NBNO60934 754 aa16.97■□□□□ 0.31
LMO4-201ENST00000370542 KIF5BP33176 963 aa16.97■□□□□ 0.31
LMO4-201ENST00000370542 GNAQP50148 359 aa16.97■□□□□ 0.31
LMO4-201ENST00000370542 XRRA1Q6P2D8 792 aa16.97■□□□□ 0.31
LMO4-201ENST00000370542 LRRC8DQ7L1W4 858 aa16.97■□□□□ 0.31
LMO4-201ENST00000370542 FCHSD1Q86WN1 690 aa16.97■□□□□ 0.31
LMO4-201ENST00000370542 PDCL2Q8N4E4 241 aa16.97■□□□□ 0.31
LMO4-201ENST00000370542 C7orf31Q8N865 590 aa16.97■□□□□ 0.31
LMO4-201ENST00000370542 CTCFLQ8NI51 663 aaPredicted RBP16.97■□□□□ 0.31
LMO4-201ENST00000370542 TMX3Q96JJ7 454 aa16.97■□□□□ 0.31
LMO4-201ENST00000370542 SPATA33Q96N06 139 aa16.97■□□□□ 0.31
LMO4-201ENST00000370542 USP25Q9UHP3 1055 aa16.97■□□□□ 0.31
LMO4-201ENST00000370542 COG5Q9UP83 839 aa16.97■□□□□ 0.31
LMO4-201ENST00000370542 PTPRSQ13332 1948 aa16.96■□□□□ 0.31
LMO4-201ENST00000370542 ZNF286BP0CG31 522 aa16.96■□□□□ 0.31
LMO4-201ENST00000370542 PPP2R2DQ66LE6 453 aa16.96■□□□□ 0.31
LMO4-201ENST00000370542 CREB3L3Q68CJ9 461 aa16.96■□□□□ 0.31
LMO4-201ENST00000370542 SGMS1Q86VZ5 419 aa16.96■□□□□ 0.31
LMO4-201ENST00000370542 HERC6Q8IVU3 1022 aa16.96■□□□□ 0.31
LMO4-201ENST00000370542 MICALL1Q8N3F8 863 aa16.96■□□□□ 0.31
LMO4-201ENST00000370542 SRBD1Q8N5C6 995 aaKnown RBP16.96■□□□□ 0.31
LMO4-201ENST00000370542 WNT8BQ93098 351 aa16.96■□□□□ 0.31
LMO4-201ENST00000370542 RRP36Q96EU6 259 aaKnown RBP16.96■□□□□ 0.31
LMO4-201ENST00000370542 SENP7Q9BQF6 1050 aa16.96■□□□□ 0.31
LMO4-201ENST00000370542 BCAS3Q9H6U6 928 aa16.96■□□□□ 0.31
LMO4-201ENST00000370542 CD320Q9NPF0 282 aa16.96■□□□□ 0.31
LMO4-201ENST00000370542 CA3P07451 260 aa16.95■□□□□ 0.3
LMO4-201ENST00000370542 CALM1P0DP23 149 aa16.95■□□□□ 0.3
LMO4-201ENST00000370542 CALM2P0DP24 149 aa16.95■□□□□ 0.3
LMO4-201ENST00000370542 CALM3P0DP25 149 aa16.95■□□□□ 0.3
LMO4-201ENST00000370542 MKRN4PQ13434 485 aaPredicted RBP16.95■□□□□ 0.3
LMO4-201ENST00000370542 NEDD9Q14511 834 aa16.95■□□□□ 0.3
LMO4-201ENST00000370542 GNPTABQ3T906 1256 aa16.95■□□□□ 0.3
LMO4-201ENST00000370542 PCNX4Q63HM2 1172 aa16.95■□□□□ 0.3
LMO4-201ENST00000370542 CNKSR3Q6P9H4 555 aa16.95■□□□□ 0.3
LMO4-201ENST00000370542 METTL7BQ6UX53 244 aa16.95■□□□□ 0.3
LMO4-201ENST00000370542 SERINC5Q86VE9 423 aa16.95■□□□□ 0.3
LMO4-201ENST00000370542 ALG1Q9BT22 464 aa16.95■□□□□ 0.3
LMO4-201ENST00000370542 MYL10Q9BUA6 226 aa16.95■□□□□ 0.3
LMO4-201ENST00000370542 FTOQ9C0B1 505 aaKnown RBP eCLIP16.95■□□□□ 0.3
LMO4-201ENST00000370542 KCNH6Q9H252 994 aa16.95■□□□□ 0.3
LMO4-201ENST00000370542 H3BRB1 525 aa16.94■□□□□ 0.3
LMO4-201ENST00000370542 FIBPO43427 364 aa16.94■□□□□ 0.3
LMO4-201ENST00000370542 PLEKHA8P1O95397 391 aa16.94■□□□□ 0.3
LMO4-201ENST00000370542 LGALS2P05162 132 aa16.94■□□□□ 0.3
LMO4-201ENST00000370542 NEK4P51957 841 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms