RNA–Protein interactions for RNA: ENST00000362093.4

CKLF-204, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 412 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-204ENST00000362093 HOXC8P31273 242 aa19.22■□□□□ 0.67
CKLF-204ENST00000362093 SETQ01105 290 aaPredicted RBP19.22■□□□□ 0.67
CKLF-204ENST00000362093 PRR16Q569H4 304 aa19.22■□□□□ 0.67
CKLF-204ENST00000362093 C9orf50Q5SZB4 431 aa19.22■□□□□ 0.67
CKLF-204ENST00000362093 C16orf59Q7L2K0 433 aa19.22■□□□□ 0.67
CKLF-204ENST00000362093 TRIM50Q86XT4 487 aa19.22■□□□□ 0.67
CKLF-204ENST00000362093 PCYT2Q99447 389 aa19.22■□□□□ 0.67
CKLF-204ENST00000362093 WNT8AQ9H1J5 351 aa19.22■□□□□ 0.67
CKLF-204ENST00000362093 CYP3A7-CYP3A51PA0A087WV96 503 aa19.21■□□□□ 0.67
CKLF-204ENST00000362093 IPO5O00410 1097 aaKnown RBP19.21■□□□□ 0.67
CKLF-204ENST00000362093 SMIM10L2AP0DMW4 78 aa19.21■□□□□ 0.67
CKLF-204ENST00000362093 SMIM10L2BP0DMW5 78 aa19.21■□□□□ 0.67
CKLF-204ENST00000362093 CYP3A7P24462 503 aa19.21■□□□□ 0.67
CKLF-204ENST00000362093 CCL23P55773 120 aa19.21■□□□□ 0.67
CKLF-204ENST00000362093 ACTR2P61160 394 aa19.21■□□□□ 0.67
CKLF-204ENST00000362093 ZNF200P98182 395 aaPredicted RBP19.21■□□□□ 0.67
CKLF-204ENST00000362093 PPIGQ13427 754 aaKnown RBP eCLIP19.21■□□□□ 0.67
CKLF-204ENST00000362093 LRIT3Q3SXY7 679 aa19.21■□□□□ 0.67
CKLF-204ENST00000362093 KRT25Q7Z3Z0 450 aa19.21■□□□□ 0.67
CKLF-204ENST00000362093 OXER1Q8TDS5 423 aa19.21■□□□□ 0.67
CKLF-204ENST00000362093 ZNF577Q9BSK1 485 aa19.21■□□□□ 0.67
CKLF-204ENST00000362093 RNPEPQ9H4A4 650 aa19.21■□□□□ 0.67
CKLF-204ENST00000362093 SMARCAD1Q9H4L7 1026 aa19.21■□□□□ 0.67
CKLF-204ENST00000362093 PITPNM1O00562 1244 aa19.2■□□□□ 0.66
CKLF-204ENST00000362093 CCNE2O96020 404 aa19.2■□□□□ 0.66
CKLF-204ENST00000362093 BFSP2Q13515 415 aa19.2■□□□□ 0.66
CKLF-204ENST00000362093 NONOQ15233 471 aaKnown RBP eCLIP19.2■□□□□ 0.66
CKLF-204ENST00000362093 DHX38Q92620 1227 aaKnown RBP19.2■□□□□ 0.66
CKLF-204ENST00000362093 MBOAT7Q96N66 472 aa19.2■□□□□ 0.66
CKLF-204ENST00000362093 UIMC1Q96RL1 719 aa19.2■□□□□ 0.66
CKLF-204ENST00000362093 TBC1D22BQ9NU19 505 aa19.2■□□□□ 0.66
CKLF-204ENST00000362093 ZNF215Q9UL58 517 aaPredicted RBP19.2■□□□□ 0.66
CKLF-204ENST00000362093 NOD1Q9Y239 953 aa19.2■□□□□ 0.66
CKLF-204ENST00000362093 RANBP2P49792 3224 aaKnown RBP19.2■□□□□ 0.66
CKLF-204ENST00000362093 IGKV6D-21A0A0A0MT36 114 aa19.19■□□□□ 0.66
CKLF-204ENST00000362093 ST18O60284 1047 aa19.19■□□□□ 0.66
CKLF-204ENST00000362093 ADAM17P78536 824 aa19.19■□□□□ 0.66
CKLF-204ENST00000362093 PTK7Q13308 1070 aa19.19■□□□□ 0.66
CKLF-204ENST00000362093 INF2Q27J81 1249 aa19.19■□□□□ 0.66
CKLF-204ENST00000362093 Q4G0T1 1027 aa19.19■□□□□ 0.66
CKLF-204ENST00000362093 MOXD1Q6UVY6 613 aa19.19■□□□□ 0.66
CKLF-204ENST00000362093 ABHD15Q6UXT9 468 aa19.19■□□□□ 0.66
CKLF-204ENST00000362093 TNFRSF25Q93038 417 aa19.19■□□□□ 0.66
CKLF-204ENST00000362093 VWCEQ96DN2 955 aa19.19■□□□□ 0.66
CKLF-204ENST00000362093 IL23AQ9NPF7 189 aa19.19■□□□□ 0.66
CKLF-204ENST00000362093 ERAP1Q9NZ08 941 aa19.19■□□□□ 0.66
CKLF-204ENST00000362093 EMSYQ7Z589 1322 aa19.19■□□□□ 0.66
CKLF-204ENST00000362093 CCDC194A0A1B0GVG4 234 aa19.18■□□□□ 0.66
CKLF-204ENST00000362093 C17orf102A2RUQ5 167 aa19.18■□□□□ 0.66
CKLF-204ENST00000362093 DDX39AO00148 427 aaKnown RBP19.18■□□□□ 0.66
CKLF-204ENST00000362093 SOX1O00570 391 aaPredicted RBP19.18■□□□□ 0.66
CKLF-204ENST00000362093 MSH4O15457 936 aa19.18■□□□□ 0.66
CKLF-204ENST00000362093 IQCF3P0C7M6 154 aa19.18■□□□□ 0.66
CKLF-204ENST00000362093 KRT2P35908 639 aa19.18■□□□□ 0.66
CKLF-204ENST00000362093 RBL2Q08999 1139 aa19.18■□□□□ 0.66
CKLF-204ENST00000362093 TRIM71Q2Q1W2 868 aaKnown RBP19.18■□□□□ 0.66
CKLF-204ENST00000362093 EARS2Q5JPH6 523 aaKnown RBP19.18■□□□□ 0.66
CKLF-204ENST00000362093 TMEM240Q5SV17 173 aa19.18■□□□□ 0.66
CKLF-204ENST00000362093 KRT40Q6A162 431 aa19.18■□□□□ 0.66
CKLF-204ENST00000362093 PLPPR4Q7Z2D5 763 aa19.18■□□□□ 0.66
CKLF-204ENST00000362093 RETREG2Q8NC44 543 aa19.18■□□□□ 0.66
CKLF-204ENST00000362093 CAGE1Q8TC20 777 aa19.18■□□□□ 0.66
CKLF-204ENST00000362093 GLG1Q92896 1179 aa19.18■□□□□ 0.66
CKLF-204ENST00000362093 SCLYQ96I15 445 aa19.18■□□□□ 0.66
CKLF-204ENST00000362093 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.18■□□□□ 0.661e-10■□□□□ 8.5
CKLF-204ENST00000362093 CD2BP2O95400 341 aaKnown RBP19.17■□□□□ 0.66
CKLF-204ENST00000362093 TDP2O95551 362 aa19.17■□□□□ 0.66
CKLF-204ENST00000362093 MMP1P03956 469 aa19.17■□□□□ 0.66
CKLF-204ENST00000362093 ACRP10323 421 aa19.17■□□□□ 0.66
CKLF-204ENST00000362093 GNAT1P11488 350 aa19.17■□□□□ 0.66
CKLF-204ENST00000362093 STAT5BP51692 787 aa19.17■□□□□ 0.66
CKLF-204ENST00000362093 ZNF746Q6NUN9 644 aaPredicted RBP19.17■□□□□ 0.66
CKLF-204ENST00000362093 PIK3AP1Q6ZUJ8 805 aa19.17■□□□□ 0.66
CKLF-204ENST00000362093 ZNF365Q70YC5 407 aa19.17■□□□□ 0.66
CKLF-204ENST00000362093 SERINC5Q86VE9 423 aa19.17■□□□□ 0.66
CKLF-204ENST00000362093 ATP6V0A1Q93050 837 aa19.17■□□□□ 0.66
CKLF-204ENST00000362093 WNT8BQ93098 351 aa19.17■□□□□ 0.66
CKLF-204ENST00000362093 SETD4Q9NVD3 440 aa19.17■□□□□ 0.66
CKLF-204ENST00000362093 NRCAMQ92823 1304 aa19.17■□□□□ 0.66
CKLF-204ENST00000362093 TRIOBPQ9H2D6 2365 aa19.17■□□□□ 0.66
CKLF-204ENST00000362093 BTBD18B2RXH4 712 aa19.16■□□□□ 0.66
CKLF-204ENST00000362093 TREHO43280 583 aa19.16■□□□□ 0.66
CKLF-204ENST00000362093 CKBP12277 381 aa19.16■□□□□ 0.66
CKLF-204ENST00000362093 MARK3P27448 753 aa19.16■□□□□ 0.66
CKLF-204ENST00000362093 HMGN5P82970 282 aaKnown RBP19.16■□□□□ 0.66
CKLF-204ENST00000362093 NR5A1Q13285 461 aa19.16■□□□□ 0.66
CKLF-204ENST00000362093 NEK8Q86SG6 692 aa19.16■□□□□ 0.66
CKLF-204ENST00000362093 RPUSD2Q8IZ73 545 aaKnown RBP19.16■□□□□ 0.66
CKLF-204ENST00000362093 CCDC155Q8N6L0 562 aa19.16■□□□□ 0.66
CKLF-204ENST00000362093 AFAP1L1Q8TED9 768 aa19.16■□□□□ 0.66
CKLF-204ENST00000362093 SLC5A5Q92911 643 aa19.16■□□□□ 0.66
CKLF-204ENST00000362093 RIT2Q99578 217 aa19.16■□□□□ 0.66
CKLF-204ENST00000362093 AZI2Q9H6S1 392 aa19.16■□□□□ 0.66
CKLF-204ENST00000362093 BRMS1Q9HCU9 246 aa19.16■□□□□ 0.66
CKLF-204ENST00000362093 SELPP16109 830 aa19.15■□□□□ 0.66
CKLF-204ENST00000362093 RFC2P35250 354 aa19.15■□□□□ 0.66
CKLF-204ENST00000362093 MCM2P49736 904 aa19.15■□□□□ 0.66
CKLF-204ENST00000362093 FOSBP53539 338 aa19.15■□□□□ 0.66
CKLF-204ENST00000362093 KRT76Q01546 638 aa19.15■□□□□ 0.66
CKLF-204ENST00000362093 TRIM29Q14134 588 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms