RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 NRCAMQ92823 1304 aa12.22□□□□□ -0.45
CAPN3-204ENST00000356316 hCG_1642624A0A1W2PR95 340 aa12.22□□□□□ -0.45
CAPN3-204ENST00000356316 LCHNA4D1U4 455 aa12.22□□□□□ -0.45
CAPN3-204ENST00000356316 TCF7P36402 384 aaPredicted RBP12.22□□□□□ -0.45
CAPN3-204ENST00000356316 FGD1P98174 961 aa12.22□□□□□ -0.45
CAPN3-204ENST00000356316 SEMA3FQ13275 785 aa12.22□□□□□ -0.45
CAPN3-204ENST00000356316 GRB10Q13322 594 aa12.22□□□□□ -0.45
CAPN3-204ENST00000356316 MTMR1Q13613 665 aa12.22□□□□□ -0.45
CAPN3-204ENST00000356316 PLEKHG4Q58EX7 1191 aa12.22□□□□□ -0.45
CAPN3-204ENST00000356316 CENPQQ7L2Z9 268 aaPredicted RBP12.22□□□□□ -0.45
CAPN3-204ENST00000356316 SGMS1Q86VZ5 419 aa12.22□□□□□ -0.45
CAPN3-204ENST00000356316 MYOCDQ8IZQ8 938 aa12.22□□□□□ -0.45
CAPN3-204ENST00000356316 SEPT1Q8WYJ6 367 aa12.22□□□□□ -0.45
CAPN3-204ENST00000356316 GLG1Q92896 1179 aa12.22□□□□□ -0.45
CAPN3-204ENST00000356316 TNPO1Q92973 898 aaKnown RBP12.22□□□□□ -0.45
CAPN3-204ENST00000356316 TGS1Q96RS0 853 aaKnown RBP12.22□□□□□ -0.45
CAPN3-204ENST00000356316 LMCD1Q9NZU5 365 aa12.22□□□□□ -0.45
CAPN3-204ENST00000356316 MTUS1Q9ULD2 1270 aa12.22□□□□□ -0.45
CAPN3-204ENST00000356316 PCDHA6Q9UN73 950 aa12.22□□□□□ -0.45
CAPN3-204ENST00000356316 COG5Q9UP83 839 aa12.22□□□□□ -0.45
CAPN3-204ENST00000356316 PCDHA8Q9Y5H6 950 aa12.22□□□□□ -0.45
CAPN3-204ENST00000356316 PTPRSQ13332 1948 aa12.21□□□□□ -0.45
CAPN3-204ENST00000356316 EPOPA6NHQ4 379 aa12.21□□□□□ -0.45
CAPN3-204ENST00000356316 ZBTB43O43298 467 aa12.21□□□□□ -0.45
CAPN3-204ENST00000356316 CTSHP09668 335 aa12.21□□□□□ -0.45
CAPN3-204ENST00000356316 KRT32Q14532 448 aa12.21□□□□□ -0.45
CAPN3-204ENST00000356316 MBTPS1Q14703 1052 aa12.21□□□□□ -0.45
CAPN3-204ENST00000356316 TRAF7Q6Q0C0 670 aa12.21□□□□□ -0.45
CAPN3-204ENST00000356316 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.21□□□□□ -0.45
CAPN3-204ENST00000356316 TMTC3Q6ZXV5 915 aa12.21□□□□□ -0.45
CAPN3-204ENST00000356316 DHX32Q7L7V1 743 aaKnown RBP12.21□□□□□ -0.45
CAPN3-204ENST00000356316 RSPH3Q86UC2 560 aa12.21□□□□□ -0.45
CAPN3-204ENST00000356316 HLA-CQ95604 372 aa12.21□□□□□ -0.45
CAPN3-204ENST00000356316 UHRF1Q96T88 793 aaPredicted RBP12.21□□□□□ -0.45
CAPN3-204ENST00000356316 SMARCAD1Q9H4L7 1026 aa12.21□□□□□ -0.45
CAPN3-204ENST00000356316 ERAP1Q9NZ08 941 aa12.21□□□□□ -0.45
CAPN3-204ENST00000356316 NAP1L2Q9ULW6 460 aaPredicted RBP12.21□□□□□ -0.45
CAPN3-204ENST00000356316 ATP9AO75110 1047 aa12.2□□□□□ -0.46
CAPN3-204ENST00000356316 ARHGEF15O94989 841 aa12.2□□□□□ -0.46
CAPN3-204ENST00000356316 UPP2O95045 317 aa12.2□□□□□ -0.46
CAPN3-204ENST00000356316 FOSP01100 380 aaPredicted RBP12.2□□□□□ -0.46
CAPN3-204ENST00000356316 HMGB1P09429 215 aaKnown RBP12.2□□□□□ -0.46
CAPN3-204ENST00000356316 ITGB5P18084 799 aa12.2□□□□□ -0.46
CAPN3-204ENST00000356316 HOXC8P31273 242 aa12.2□□□□□ -0.46
CAPN3-204ENST00000356316 NAPAP54920 295 aa12.2□□□□□ -0.46
CAPN3-204ENST00000356316 ERVK-21P61565 698 aa12.2□□□□□ -0.46
CAPN3-204ENST00000356316 UBE2SQ16763 222 aa12.2□□□□□ -0.46
CAPN3-204ENST00000356316 RTN1Q16799 776 aa12.2□□□□□ -0.46
CAPN3-204ENST00000356316 TCTN1Q2MV58 587 aa12.2□□□□□ -0.46
CAPN3-204ENST00000356316 KRT40Q6A162 431 aa12.2□□□□□ -0.46
CAPN3-204ENST00000356316 TAF2Q6P1X5 1199 aa12.2□□□□□ -0.46
CAPN3-204ENST00000356316 TRIM50Q86XT4 487 aa12.2□□□□□ -0.46
CAPN3-204ENST00000356316 TEX2Q8IWB9 1127 aa12.2□□□□□ -0.46
CAPN3-204ENST00000356316 LMBR1Q8WVP7 490 aa12.2□□□□□ -0.46
CAPN3-204ENST00000356316 APBB2Q92870 758 aa12.2□□□□□ -0.46
CAPN3-204ENST00000356316 SDF4Q9BRK5 362 aa12.2□□□□□ -0.46
CAPN3-204ENST00000356316 SUGCTQ9HAC7 445 aa12.2□□□□□ -0.46
CAPN3-204ENST00000356316 JADE2Q9NQC1 790 aa12.2□□□□□ -0.46
CAPN3-204ENST00000356316 PKD2L1Q9P0L9 805 aa12.2□□□□□ -0.46
CAPN3-204ENST00000356316 UBIAD1Q9Y5Z9 338 aa12.2□□□□□ -0.46
CAPN3-204ENST00000356316 V9GY48 417 aaPredicted RBP12.2□□□□□ -0.46
CAPN3-204ENST00000356316 GSTTP1A0A1W2PQM5 241 aa12.19□□□□□ -0.46
CAPN3-204ENST00000356316 LINC01553A4QN01 128 aa12.19□□□□□ -0.46
CAPN3-204ENST00000356316 CDC45O75419 566 aa12.19□□□□□ -0.46
CAPN3-204ENST00000356316 KCNA2P16389 499 aa12.19□□□□□ -0.46
CAPN3-204ENST00000356316 ZNF76P36508 570 aa12.19□□□□□ -0.46
CAPN3-204ENST00000356316 NUBP1P53384 320 aa12.19□□□□□ -0.46
CAPN3-204ENST00000356316 TFF2Q03403 129 aa12.19□□□□□ -0.46
CAPN3-204ENST00000356316 PPFIA1Q13136 1202 aa12.19□□□□□ -0.46
CAPN3-204ENST00000356316 FAM26DQ5JW98 314 aa12.19□□□□□ -0.46
CAPN3-204ENST00000356316 APOA5Q6Q788 366 aa12.19□□□□□ -0.46
CAPN3-204ENST00000356316 YME1L1Q96TA2 773 aa12.19□□□□□ -0.46
CAPN3-204ENST00000356316 IFIH1Q9BYX4 1025 aaKnown RBP12.19□□□□□ -0.46
CAPN3-204ENST00000356316 GLT8D2Q9H1C3 349 aa12.19□□□□□ -0.46
CAPN3-204ENST00000356316 AZI2Q9H6S1 392 aa12.19□□□□□ -0.46
CAPN3-204ENST00000356316 RIC8AQ9NPQ8 531 aa12.19□□□□□ -0.46
CAPN3-204ENST00000356316 TCF20Q9UGU0 1960 aaKnown RBP12.18□□□□□ -0.46
CAPN3-204ENST00000356316 CCDC196A0A1B0GTZ2 297 aa12.18□□□□□ -0.46
CAPN3-204ENST00000356316 SMCO2A6NFE2 343 aa12.18□□□□□ -0.46
CAPN3-204ENST00000356316 RPLP2P05387 115 aaKnown RBP12.18□□□□□ -0.46
CAPN3-204ENST00000356316 BMP1P13497 986 aa12.18□□□□□ -0.46
CAPN3-204ENST00000356316 MARK3P27448 753 aa12.18□□□□□ -0.46
CAPN3-204ENST00000356316 ADCY7P51828 1080 aa12.18□□□□□ -0.46
CAPN3-204ENST00000356316 EXOSC10Q01780 885 aaKnown RBP12.18□□□□□ -0.46
CAPN3-204ENST00000356316 GRIK4Q16099 956 aa12.18□□□□□ -0.46
CAPN3-204ENST00000356316 PTPROQ16827 1216 aa12.18□□□□□ -0.46
CAPN3-204ENST00000356316 TSGA10IPQ3SY00 556 aa12.18□□□□□ -0.46
CAPN3-204ENST00000356316 PPP1R18Q6NYC8 613 aa12.18□□□□□ -0.46
CAPN3-204ENST00000356316 FBXO22Q8NEZ5 403 aa12.18□□□□□ -0.46
CAPN3-204ENST00000356316 GDPD5Q8WTR4 605 aa12.18□□□□□ -0.46
CAPN3-204ENST00000356316 TOP1MTQ969P6 601 aa12.18□□□□□ -0.46
CAPN3-204ENST00000356316 SAMD11Q96NU1 681 aa12.18□□□□□ -0.46
CAPN3-204ENST00000356316 MXRA8Q9BRK3 442 aa12.18□□□□□ -0.46
CAPN3-204ENST00000356316 JPH1Q9HDC5 661 aaPredicted RBP12.18□□□□□ -0.46
CAPN3-204ENST00000356316 KCNH7Q9NS40 1196 aa12.18□□□□□ -0.46
CAPN3-204ENST00000356316 SLC9A2Q9UBY0 812 aa12.18□□□□□ -0.46
CAPN3-204ENST00000356316 TUBE1Q9UJT0 475 aa12.18□□□□□ -0.46
CAPN3-204ENST00000356316 TELO2Q9Y4R8 837 aa12.18□□□□□ -0.46
CAPN3-204ENST00000356316 MUC3AQ02505 3323 aa12.17□□□□□ -0.46
CAPN3-204ENST00000356316 MICAL3Q7RTP6 2002 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms