RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 ANKS1AQ92625 1134 aa11.17□□□□□ -0.62
MRPL55-204ENST00000348259 BRF1Q92994 677 aa11.17□□□□□ -0.62
MRPL55-204ENST00000348259 TOP1MTQ969P6 601 aa11.17□□□□□ -0.62
MRPL55-204ENST00000348259 C16orf70Q9BSU1 422 aa11.17□□□□□ -0.62
MRPL55-204ENST00000348259 KATNAL1Q9BW62 490 aa11.17□□□□□ -0.62
MRPL55-204ENST00000348259 ZDHHC9Q9Y397 364 aa11.17□□□□□ -0.62
MRPL55-204ENST00000348259 ZDBF2Q9HCK1 2354 aa11.17□□□□□ -0.62
MRPL55-204ENST00000348259 C5orf67F2Z3F1 127 aa11.16□□□□□ -0.62
MRPL55-204ENST00000348259 H3BQ06 376 aaPredicted RBP11.16□□□□□ -0.62
MRPL55-204ENST00000348259 EIF3JO75822 258 aaKnown RBP11.16□□□□□ -0.62
MRPL55-204ENST00000348259 GOLGA8HP0CJ92 632 aa11.16□□□□□ -0.62
MRPL55-204ENST00000348259 PDCP20941 246 aa11.16□□□□□ -0.62
MRPL55-204ENST00000348259 PDIA3P30101 505 aaKnown RBP11.16□□□□□ -0.62
MRPL55-204ENST00000348259 HSD17B4P51659 736 aa11.16□□□□□ -0.62
MRPL55-204ENST00000348259 ADAM17P78536 824 aa11.16□□□□□ -0.62
MRPL55-204ENST00000348259 LAMC2Q13753 1193 aa11.16□□□□□ -0.62
MRPL55-204ENST00000348259 CDC37Q16543 378 aaPredicted RBP11.16□□□□□ -0.62
MRPL55-204ENST00000348259 HSDL1Q3SXM5 330 aa11.16□□□□□ -0.62
MRPL55-204ENST00000348259 USH1GQ495M9 461 aa11.16□□□□□ -0.62
MRPL55-204ENST00000348259 TCEAL5Q5H9L2 206 aa11.16□□□□□ -0.62
MRPL55-204ENST00000348259 FAM117BQ6P1L5 589 aa11.16□□□□□ -0.62
MRPL55-204ENST00000348259 SGMS1Q86VZ5 419 aa11.16□□□□□ -0.62
MRPL55-204ENST00000348259 DGKHQ86XP1 1220 aa11.16□□□□□ -0.62
MRPL55-204ENST00000348259 CCDC83Q8IWF9 413 aa11.16□□□□□ -0.62
MRPL55-204ENST00000348259 TMTC2Q8N394 836 aa11.16□□□□□ -0.62
MRPL55-204ENST00000348259 C7orf31Q8N865 590 aa11.16□□□□□ -0.62
MRPL55-204ENST00000348259 BANK1Q8NDB2 785 aa11.16□□□□□ -0.62
MRPL55-204ENST00000348259 MTMR8Q96EF0 704 aa11.16□□□□□ -0.62
MRPL55-204ENST00000348259 TCEANC2Q96MN5 208 aa11.16□□□□□ -0.62
MRPL55-204ENST00000348259 RMDN3Q96TC7 470 aa11.16□□□□□ -0.62
MRPL55-204ENST00000348259 UBA5Q9GZZ9 404 aa11.16□□□□□ -0.62
MRPL55-204ENST00000348259 ALG13Q9NP73 1137 aaKnown RBP11.16□□□□□ -0.62
MRPL55-204ENST00000348259 PXMP2Q9NR77 195 aa11.16□□□□□ -0.62
MRPL55-204ENST00000348259 NEDD4P46934 1319 aa11.15□□□□□ -0.62
MRPL55-204ENST00000348259 VPS13AQ96RL7 3174 aa11.15□□□□□ -0.62
MRPL55-204ENST00000348259 SPTBN4Q9H254 2564 aa11.15□□□□□ -0.62
MRPL55-204ENST00000348259 DDX11L8A8MPP1 907 aa11.15□□□□□ -0.62
MRPL55-204ENST00000348259 DHX16O60231 1041 aaKnown RBP11.15□□□□□ -0.62
MRPL55-204ENST00000348259 PPFIA4O75335 1185 aa11.15□□□□□ -0.62
MRPL55-204ENST00000348259 NR3C2P08235 984 aa11.15□□□□□ -0.62
MRPL55-204ENST00000348259 IRS1P35568 1242 aa11.15□□□□□ -0.62
MRPL55-204ENST00000348259 RCAN1P53805 252 aa11.15□□□□□ -0.62
MRPL55-204ENST00000348259 SP2Q02086 613 aa11.15□□□□□ -0.62
MRPL55-204ENST00000348259 SMAD2Q15796 467 aaKnown RBP11.15□□□□□ -0.62
MRPL55-204ENST00000348259 QRICH1Q2TAL8 776 aa11.15□□□□□ -0.62
MRPL55-204ENST00000348259 HFE2Q6ZVN8 426 aa11.15□□□□□ -0.62
MRPL55-204ENST00000348259 CHST3Q7LGC8 479 aa11.15□□□□□ -0.62
MRPL55-204ENST00000348259 FBXO11Q86XK2 927 aa11.15□□□□□ -0.62
MRPL55-204ENST00000348259 ADHFE1Q8IWW8 467 aa11.15□□□□□ -0.62
MRPL55-204ENST00000348259 ADGRF4Q8IZF3 695 aa11.15□□□□□ -0.62
MRPL55-204ENST00000348259 SMARCC2Q8TAQ2 1214 aa11.15□□□□□ -0.62
MRPL55-204ENST00000348259 IGDCC4Q8TDY8 1250 aa11.15□□□□□ -0.62
MRPL55-204ENST00000348259 LARP6Q9BRS8 491 aaKnown RBP11.15□□□□□ -0.62
MRPL55-204ENST00000348259 ALG1Q9BT22 464 aa11.15□□□□□ -0.62
MRPL55-204ENST00000348259 ZSWIM5Q9P217 1185 aa11.15□□□□□ -0.62
MRPL55-204ENST00000348259 WDR87Q6ZQQ6 2873 aa11.14□□□□□ -0.63
MRPL55-204ENST00000348259 RSPH10B2B2RC85 870 aa11.14□□□□□ -0.63
MRPL55-204ENST00000348259 SH2B2O14492 632 aaPredicted RBP11.14□□□□□ -0.63
MRPL55-204ENST00000348259 PPP1R11O60927 126 aaPredicted RBP11.14□□□□□ -0.63
MRPL55-204ENST00000348259 CAND2O75155 1236 aa11.14□□□□□ -0.63
MRPL55-204ENST00000348259 AMHP03971 560 aa11.14□□□□□ -0.63
MRPL55-204ENST00000348259 RSPH10BP0C881 870 aa11.14□□□□□ -0.63
MRPL55-204ENST00000348259 SYT1P21579 422 aa11.14□□□□□ -0.63
MRPL55-204ENST00000348259 GJB2P29033 226 aa11.14□□□□□ -0.63
MRPL55-204ENST00000348259 SSTR3P32745 418 aaPredicted RBP11.14□□□□□ -0.63
MRPL55-204ENST00000348259 CHMP4BP1P59074 171 aa11.14□□□□□ -0.63
MRPL55-204ENST00000348259 HMGN5P82970 282 aaKnown RBP11.14□□□□□ -0.63
MRPL55-204ENST00000348259 DLX2Q07687 328 aaPredicted RBP11.14□□□□□ -0.63
MRPL55-204ENST00000348259 APOBRQ0VD83 1088 aa11.14□□□□□ -0.63
MRPL55-204ENST00000348259 GPM6BQ13491 265 aa11.14□□□□□ -0.63
MRPL55-204ENST00000348259 PTPROQ16827 1216 aa11.14□□□□□ -0.63
MRPL55-204ENST00000348259 SLC35G1Q2M3R5 365 aa11.14□□□□□ -0.63
MRPL55-204ENST00000348259 HERC4Q5GLZ8 1057 aaPredicted RBP11.14□□□□□ -0.63
MRPL55-204ENST00000348259 RRP12Q5JTH9 1297 aaKnown RBP11.14□□□□□ -0.63
MRPL55-204ENST00000348259 CELF3Q5SZQ8 465 aaKnown RBP11.14□□□□□ -0.63
MRPL55-204ENST00000348259 CYB5R4Q7L1T6 521 aa11.14□□□□□ -0.63
MRPL55-204ENST00000348259 VSIG10LQ86VR7 867 aa11.14□□□□□ -0.63
MRPL55-204ENST00000348259 TMEM192Q8IY95 271 aa11.14□□□□□ -0.63
MRPL55-204ENST00000348259 MYOCDQ8IZQ8 938 aa11.14□□□□□ -0.63
MRPL55-204ENST00000348259 NECAB1Q8N987 351 aa11.14□□□□□ -0.63
MRPL55-204ENST00000348259 IL31RAQ8NI17 732 aa11.14□□□□□ -0.63
MRPL55-204ENST00000348259 ESR2Q92731 530 aa11.14□□□□□ -0.63
MRPL55-204ENST00000348259 PDCD2LQ9BRP1 358 aa11.14□□□□□ -0.63
MRPL55-204ENST00000348259 NSUN3Q9H649 340 aaKnown RBP11.14□□□□□ -0.63
MRPL55-204ENST00000348259 JMJD4Q9H9V9 463 aa11.14□□□□□ -0.63
MRPL55-204ENST00000348259 KAT6AQ92794 2004 aa11.14□□□□□ -0.63
MRPL55-204ENST00000348259 FRMPD4Q14CM0 1322 aa11.13□□□□□ -0.63
MRPL55-204ENST00000348259 BAZ2BQ9UIF8 2168 aaKnown RBP11.13□□□□□ -0.63
MRPL55-204ENST00000348259 DCHS1Q96JQ0 3298 aa11.13□□□□□ -0.63
MRPL55-204ENST00000348259 B4E1Z4 1266 aa11.13□□□□□ -0.63
MRPL55-204ENST00000348259 STX6O43752 255 aa11.13□□□□□ -0.63
MRPL55-204ENST00000348259 BAG4O95429 457 aaKnown RBP11.13□□□□□ -0.63
MRPL55-204ENST00000348259 EIF2AK2P19525 551 aaKnown RBP11.13□□□□□ -0.63
MRPL55-204ENST00000348259 UBA1P22314 1058 aaKnown RBP11.13□□□□□ -0.63
MRPL55-204ENST00000348259 SCRN1Q12765 414 aa11.13□□□□□ -0.63
MRPL55-204ENST00000348259 PKP1Q13835 747 aa11.13□□□□□ -0.63
MRPL55-204ENST00000348259 CAMK1Q14012 370 aa11.13□□□□□ -0.63
MRPL55-204ENST00000348259 NBR1Q14596 966 aa11.13□□□□□ -0.63
MRPL55-204ENST00000348259 SART3Q15020 963 aaKnown RBP11.13□□□□□ -0.63
MRPL55-204ENST00000348259 ASPRV1Q53RT3 343 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms