RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 EPB41L4AQ9HCS5 686 aaPredicted RBP21.35■■□□□ 1.01
SEMA6C-201ENST00000341697 MYOZ2Q9NPC6 264 aa21.35■■□□□ 1.01
SEMA6C-201ENST00000341697 C19orf81C9J6K1 198 aa21.35■■□□□ 1.01
SEMA6C-201ENST00000341697 PAK2Q13177 524 aa21.35■■□□□ 1.01
SEMA6C-201ENST00000341697 TNS2Q63HR2 1409 aa21.35■■□□□ 1.01
SEMA6C-201ENST00000341697 RNF8O76064 485 aa21.35■■□□□ 1.01
SEMA6C-201ENST00000341697 ABL1P00519 1130 aa21.35■■□□□ 1.01
SEMA6C-201ENST00000341697 MYL3P08590 195 aa21.35■■□□□ 1.01
SEMA6C-201ENST00000341697 PPP1R16BQ96T49 567 aa21.35■■□□□ 1.01
SEMA6C-201ENST00000341697 PRDM10Q9NQV6 1147 aa21.35■■□□□ 1.01
SEMA6C-201ENST00000341697 NDUFB10O96000 172 aa21.34■■□□□ 1.01
SEMA6C-201ENST00000341697 HDLBPQ00341 1268 aaKnown RBP21.34■■□□□ 1.01
SEMA6C-201ENST00000341697 CUL4BQ13620 913 aa21.34■■□□□ 1.01
SEMA6C-201ENST00000341697 TTBK2Q6IQ55 1244 aa21.34■■□□□ 1.01
SEMA6C-201ENST00000341697 FAM49AQ9H0Q0 323 aaPredicted RBP21.34■■□□□ 1.01
SEMA6C-201ENST00000341697 GGA3Q9NZ52 723 aa21.34■■□□□ 1.01
SEMA6C-201ENST00000341697 GCNT4Q9P109 453 aa21.34■■□□□ 1.01
SEMA6C-201ENST00000341697 SFI1A8K8P3 1242 aa21.34■■□□□ 1.01
SEMA6C-201ENST00000341697 PADI6Q6TGC4 694 aa21.34■■□□□ 1.01
SEMA6C-201ENST00000341697 TRIM50Q86XT4 487 aa21.34■■□□□ 1.01
SEMA6C-201ENST00000341697 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.34■■□□□ 1.01
SEMA6C-201ENST00000341697 RAD54LQ92698 747 aa21.34■■□□□ 1.01
SEMA6C-201ENST00000341697 WHAMMP3Q1A5X7 153 aa21.34■■□□□ 1.01
SEMA6C-201ENST00000341697 MSTO1Q9BUK6 570 aa21.34■■□□□ 1.01
SEMA6C-201ENST00000341697 NKIRAS1Q9NYS0 192 aa21.34■■□□□ 1.01
SEMA6C-201ENST00000341697 P4HBP07237 508 aaKnown RBP21.34■■□□□ 1.01
SEMA6C-201ENST00000341697 METTL23Q86XA0 190 aa21.34■■□□□ 1.01
SEMA6C-201ENST00000341697 DYDC2Q96IM9 177 aa21.34■■□□□ 1.01
SEMA6C-201ENST00000341697 VPS18Q9P253 973 aa21.34■■□□□ 1.01
SEMA6C-201ENST00000341697 COL3A1P02461 1466 aaPredicted RBP21.33■■□□□ 1.01
SEMA6C-201ENST00000341697 IPO5O00410 1097 aaKnown RBP21.33■■□□□ 1.01
SEMA6C-201ENST00000341697 GNAT1P11488 350 aa21.33■■□□□ 1.01
SEMA6C-201ENST00000341697 RASA1P20936 1047 aa21.33■■□□□ 1.01
SEMA6C-201ENST00000341697 OSTNP61366 133 aa21.33■■□□□ 1.01
SEMA6C-201ENST00000341697 RBL2Q08999 1139 aa21.33■■□□□ 1.01
SEMA6C-201ENST00000341697 IFRD2Q12894 506 aaPredicted RBP21.33■■□□□ 1.01
SEMA6C-201ENST00000341697 PPP2R5EQ16537 467 aa21.33■■□□□ 1.01
SEMA6C-201ENST00000341697 PLCD4Q9BRC7 762 aa21.33■■□□□ 1.01
SEMA6C-201ENST00000341697 RAB17Q9H0T7 212 aa21.33■■□□□ 1.01
SEMA6C-201ENST00000341697 SNX25Q9H3E2 840 aa21.33■■□□□ 1.01
SEMA6C-201ENST00000341697 RNASELQ05823 741 aaKnown RBP21.33■■□□□ 1.01
SEMA6C-201ENST00000341697 DNAJC21Q5F1R6 531 aaKnown RBP21.33■■□□□ 1.01
SEMA6C-201ENST00000341697 ZNF280CQ8ND82 737 aa21.33■■□□□ 1.01
SEMA6C-201ENST00000341697 KAZALD1Q96I82 304 aa21.33■■□□□ 1.01
SEMA6C-201ENST00000341697 C6orf163Q5TEZ5 329 aa21.33■■□□□ 1
SEMA6C-201ENST00000341697 RPF1Q9H9Y2 349 aaKnown RBP21.33■■□□□ 1
SEMA6C-201ENST00000341697 ZNF233A6NK53 670 aa21.33■■□□□ 1
SEMA6C-201ENST00000341697 BCL9O00512 1426 aa21.33■■□□□ 1
SEMA6C-201ENST00000341697 THAP12O43422 761 aa21.33■■□□□ 1
SEMA6C-201ENST00000341697 TCP1P17987 556 aaKnown RBP21.33■■□□□ 1
SEMA6C-201ENST00000341697 QARSP47897 775 aaKnown RBP21.33■■□□□ 1
SEMA6C-201ENST00000341697 CCDC94Q9BW85 323 aaPredicted RBP21.33■■□□□ 1
SEMA6C-201ENST00000341697 E9PMD0 336 aa21.32■■□□□ 1
SEMA6C-201ENST00000341697 KLRK1P26718 216 aa21.32■■□□□ 1
SEMA6C-201ENST00000341697 TRIM11Q96F44 468 aa21.32■■□□□ 1
SEMA6C-201ENST00000341697 ZNF302Q9NR11 478 aa21.32■■□□□ 1
SEMA6C-201ENST00000341697 PRKAG2Q9UGJ0 569 aa21.32■■□□□ 1
SEMA6C-201ENST00000341697 PPP4CP60510 307 aa21.32■■□□□ 1
SEMA6C-201ENST00000341697 TTLL3Q9Y4R7 772 aa21.32■■□□□ 1
SEMA6C-201ENST00000341697 TDP2O95551 362 aa21.32■■□□□ 1
SEMA6C-201ENST00000341697 LDHAP00338 332 aaKnown RBP21.32■■□□□ 1
SEMA6C-201ENST00000341697 ZBTB16Q05516 673 aa21.32■■□□□ 1
SEMA6C-201ENST00000341697 MYO1EQ12965 1108 aa21.32■■□□□ 1
SEMA6C-201ENST00000341697 FAM76AQ8TAV0 307 aa21.32■■□□□ 1
SEMA6C-201ENST00000341697 NDST4Q9H3R1 872 aa21.32■■□□□ 1
SEMA6C-201ENST00000341697 CALCOCO1Q9P1Z2 691 aa21.32■■□□□ 1
SEMA6C-201ENST00000341697 PVALEFA0A1B0GWK0 134 aa21.32■■□□□ 1
SEMA6C-201ENST00000341697 ETF1P62495 437 aaKnown RBP21.32■■□□□ 1
SEMA6C-201ENST00000341697 ANKS4BQ8N8V4 417 aa21.32■■□□□ 1
SEMA6C-201ENST00000341697 RSAD2Q8WXG1 361 aa21.32■■□□□ 1
SEMA6C-201ENST00000341697 GDAQ9Y2T3 454 aa21.32■■□□□ 1
SEMA6C-201ENST00000341697 LRRN2O75325 713 aa21.31■■□□□ 1
SEMA6C-201ENST00000341697 GUCY1A2P33402 732 aa21.31■■□□□ 1
SEMA6C-201ENST00000341697 PDZD4Q76G19 769 aaPredicted RBP21.31■■□□□ 1
SEMA6C-201ENST00000341697 CATSPER4Q7RTX7 472 aa21.31■■□□□ 1
SEMA6C-201ENST00000341697 CROCCP2Q86T23 111 aa21.31■■□□□ 1
SEMA6C-201ENST00000341697 ZBTB9Q96C00 473 aa21.31■■□□□ 1
SEMA6C-201ENST00000341697 POTEB3A0JP26 581 aa21.31■■□□□ 1
SEMA6C-201ENST00000341697 POTECB2RU33 542 aa21.31■■□□□ 1
SEMA6C-201ENST00000341697 MYO1FO00160 1098 aa21.31■■□□□ 1
SEMA6C-201ENST00000341697 RASSF7Q02833 373 aa21.31■■□□□ 1
SEMA6C-201ENST00000341697 POTEBQ6S5H4 581 aa21.31■■□□□ 1
SEMA6C-201ENST00000341697 ANKRD13CQ8N6S4 541 aa21.31■■□□□ 1
SEMA6C-201ENST00000341697 NXF1Q9UBU9 619 aaKnown RBP21.31■■□□□ 1
SEMA6C-201ENST00000341697 POLLQ9UGP5 575 aa21.31■■□□□ 1
SEMA6C-201ENST00000341697 PHLPP2Q6ZVD8 1323 aa21.31■■□□□ 1
SEMA6C-201ENST00000341697 ARHGEF37A1IGU5 675 aa21.31■■□□□ 1
SEMA6C-201ENST00000341697 MYCP01106 439 aaPredicted RBP21.31■■□□□ 1
SEMA6C-201ENST00000341697 MTFR1LQ9H019 292 aa21.31■■□□□ 1
SEMA6C-201ENST00000341697 KRIT1O00522 736 aa21.31■■□□□ 1
SEMA6C-201ENST00000341697 ALDH3A1P30838 453 aa21.31■■□□□ 1
SEMA6C-201ENST00000341697 PPP1R2P3Q6NXS1 205 aa21.31■■□□□ 1
SEMA6C-201ENST00000341697 SFR1Q86XK3 245 aa21.31■■□□□ 1
SEMA6C-201ENST00000341697 UBE2TQ9NPD8 197 aaPredicted RBP21.31■■□□□ 1
SEMA6C-201ENST00000341697 GOLGA8IPA6NC78 632 aa21.3■■□□□ 1
SEMA6C-201ENST00000341697 ASB14A6NK59 587 aa21.3■■□□□ 1
SEMA6C-201ENST00000341697 GOLGA8JA6NMD2 632 aa21.3■■□□□ 1
SEMA6C-201ENST00000341697 TEX13BQ9BXU2 312 aa21.3■■□□□ 1
SEMA6C-201ENST00000341697 VCPKMTQ9H867 229 aa21.3■■□□□ 1
SEMA6C-201ENST00000341697 ITIH3Q06033 890 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms