RNA–Protein interactions for RNA: ENST00000316853.10

KLHDC4-202, Transcript of kelch domain containing 4, humanhuman

TSL 1 (best)

Gene KLHDC4, Length 1,287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-202ENST00000316853 LRCH3Q96II8 777 aa20.63■□□□□ 0.89
KLHDC4-202ENST00000316853 PHF20Q9BVI0 1012 aa20.63■□□□□ 0.89
KLHDC4-202ENST00000316853 TANC1Q9C0D5 1861 aa20.62■□□□□ 0.89
KLHDC4-202ENST00000316853 SMIM10L2AP0DMW4 78 aa20.62■□□□□ 0.89
KLHDC4-202ENST00000316853 SMIM10L2BP0DMW5 78 aa20.62■□□□□ 0.89
KLHDC4-202ENST00000316853 BFSP2Q13515 415 aa20.62■□□□□ 0.89
KLHDC4-202ENST00000316853 HIC1Q14526 733 aa20.62■□□□□ 0.89
KLHDC4-202ENST00000316853 LRIT3Q3SXY7 679 aa20.62■□□□□ 0.89
KLHDC4-202ENST00000316853 C16orf59Q7L2K0 433 aa20.62■□□□□ 0.89
KLHDC4-202ENST00000316853 RETREG2Q8NC44 543 aa20.62■□□□□ 0.89
KLHDC4-202ENST00000316853 DAGLBQ8NCG7 672 aa20.62■□□□□ 0.89
KLHDC4-202ENST00000316853 GLG1Q92896 1179 aa20.62■□□□□ 0.89
KLHDC4-202ENST00000316853 CTAGE1Q96RT6 745 aa20.62■□□□□ 0.89
KLHDC4-202ENST00000316853 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.62■□□□□ 0.895e-9■■■□□ 18.9
KLHDC4-202ENST00000316853 ZNF577Q9BSK1 485 aa20.62■□□□□ 0.89
KLHDC4-202ENST00000316853 MYH9P35579 1960 aaKnown RBP20.62■□□□□ 0.89
KLHDC4-202ENST00000316853 WDR81Q562E7 1941 aa20.61■□□□□ 0.89
KLHDC4-202ENST00000316853 C17orf102A2RUQ5 167 aa20.61■□□□□ 0.89
KLHDC4-202ENST00000316853 M0R2N6 131 aa20.61■□□□□ 0.89
KLHDC4-202ENST00000316853 IPO5O00410 1097 aaKnown RBP20.61■□□□□ 0.89
KLHDC4-202ENST00000316853 MARK3P27448 753 aa20.61■□□□□ 0.89
KLHDC4-202ENST00000316853 FOSBP53539 338 aa20.61■□□□□ 0.89
KLHDC4-202ENST00000316853 ACTR2P61160 394 aa20.61■□□□□ 0.89
KLHDC4-202ENST00000316853 SETQ01105 290 aaPredicted RBP20.61■□□□□ 0.89
KLHDC4-202ENST00000316853 ST3GAL1Q11201 340 aa20.61■□□□□ 0.89
KLHDC4-202ENST00000316853 CCDC83Q8IWF9 413 aa20.61■□□□□ 0.89
KLHDC4-202ENST00000316853 CCDC155Q8N6L0 562 aa20.61■□□□□ 0.89
KLHDC4-202ENST00000316853 RNPC3Q96LT9 517 aaKnown RBP20.61■□□□□ 0.89
KLHDC4-202ENST00000316853 RNPEPQ9H4A4 650 aa20.61■□□□□ 0.89
KLHDC4-202ENST00000316853 IL23AQ9NPF7 189 aa20.61■□□□□ 0.89
KLHDC4-202ENST00000316853 EDIL3O43854 480 aa20.6■□□□□ 0.89
KLHDC4-202ENST00000316853 CIITAP33076 1130 aa20.6■□□□□ 0.89
KLHDC4-202ENST00000316853 USP11P51784 963 aa20.6■□□□□ 0.89
KLHDC4-202ENST00000316853 NONOQ15233 471 aaKnown RBP eCLIP20.6■□□□□ 0.896e-7■■■□□ 16.4
KLHDC4-202ENST00000316853 RABEP1Q15276 862 aa20.6■□□□□ 0.89
KLHDC4-202ENST00000316853 TMEM240Q5SV17 173 aa20.6■□□□□ 0.89
KLHDC4-202ENST00000316853 ZNF365Q70YC5 407 aa20.6■□□□□ 0.89
KLHDC4-202ENST00000316853 DEFB128Q7Z7B8 93 aa20.6■□□□□ 0.89
KLHDC4-202ENST00000316853 DHX38Q92620 1227 aaKnown RBP20.6■□□□□ 0.89
KLHDC4-202ENST00000316853 ATP6V0A1Q93050 837 aa20.6■□□□□ 0.89
KLHDC4-202ENST00000316853 ZSCAN31Q96LW9 406 aaPredicted RBP20.6■□□□□ 0.89
KLHDC4-202ENST00000316853 SMARCAD1Q9H4L7 1026 aa20.6■□□□□ 0.89
KLHDC4-202ENST00000316853 SETD4Q9NVD3 440 aa20.6■□□□□ 0.89
KLHDC4-202ENST00000316853 TET1Q8NFU7 2136 aa20.59■□□□□ 0.89
KLHDC4-202ENST00000316853 PITPNM1O00562 1244 aa20.59■□□□□ 0.89
KLHDC4-202ENST00000316853 PTK7Q13308 1070 aa20.59■□□□□ 0.89
KLHDC4-202ENST00000316853 KRT25Q7Z3Z0 450 aa20.59■□□□□ 0.89
KLHDC4-202ENST00000316853 CAGE1Q8TC20 777 aa20.59■□□□□ 0.89
KLHDC4-202ENST00000316853 OXER1Q8TDS5 423 aa20.59■□□□□ 0.89
KLHDC4-202ENST00000316853 AZI2Q9H6S1 392 aa20.59■□□□□ 0.89
KLHDC4-202ENST00000316853 ERAP1Q9NZ08 941 aa20.59■□□□□ 0.89
KLHDC4-202ENST00000316853 CCDC194A0A1B0GVG4 234 aa20.58■□□□□ 0.89
KLHDC4-202ENST00000316853 DHX15O43143 795 aaKnown RBP20.58■□□□□ 0.89
KLHDC4-202ENST00000316853 TREHO43280 583 aa20.58■□□□□ 0.89
KLHDC4-202ENST00000316853 CCNE2O96020 404 aa20.58■□□□□ 0.89
KLHDC4-202ENST00000316853 FGBP02675 491 aa20.58■□□□□ 0.89
KLHDC4-202ENST00000316853 IQCF3P0C7M6 154 aa20.58■□□□□ 0.89
KLHDC4-202ENST00000316853 INF2Q27J81 1249 aa20.58■□□□□ 0.89
KLHDC4-202ENST00000316853 PSRC1Q6PGN9 363 aaPredicted RBP20.58■□□□□ 0.89
KLHDC4-202ENST00000316853 RPUSD2Q8IZ73 545 aaKnown RBP20.58■□□□□ 0.89
KLHDC4-202ENST00000316853 WNT8BQ93098 351 aa20.58■□□□□ 0.89
KLHDC4-202ENST00000316853 LENG9Q96B70 501 aa20.58■□□□□ 0.89
KLHDC4-202ENST00000316853 PCYT2Q99447 389 aa20.58■□□□□ 0.89
KLHDC4-202ENST00000316853 TBC1D22BQ9NU19 505 aa20.58■□□□□ 0.89
KLHDC4-202ENST00000316853 EMSYQ7Z589 1322 aa20.57■□□□□ 0.88
KLHDC4-202ENST00000316853 ST18O60284 1047 aa20.57■□□□□ 0.88
KLHDC4-202ENST00000316853 TDP2O95551 362 aa20.57■□□□□ 0.88
KLHDC4-202ENST00000316853 GNAT1P11488 350 aa20.57■□□□□ 0.88
KLHDC4-202ENST00000316853 CKBP12277 381 aa20.57■□□□□ 0.88
KLHDC4-202ENST00000316853 TRIM29Q14134 588 aa20.57■□□□□ 0.88
KLHDC4-202ENST00000316853 PIK3AP1Q6ZUJ8 805 aa20.57■□□□□ 0.88
KLHDC4-202ENST00000316853 SH2B1Q9NRF2 756 aaPredicted RBP20.57■□□□□ 0.88
KLHDC4-202ENST00000316853 TCEAL9Q9UHQ7 104 aa20.57■□□□□ 0.88
KLHDC4-202ENST00000316853 BACH1O14867 736 aa20.56■□□□□ 0.88
KLHDC4-202ENST00000316853 MSH4O15457 936 aa20.56■□□□□ 0.88
KLHDC4-202ENST00000316853 LGR5O75473 907 aa20.56■□□□□ 0.88
KLHDC4-202ENST00000316853 SELPP16109 830 aa20.56■□□□□ 0.88
KLHDC4-202ENST00000316853 KRT2P35908 639 aa20.56■□□□□ 0.88
KLHDC4-202ENST00000316853 STAT5BP51692 787 aa20.56■□□□□ 0.88
KLHDC4-202ENST00000316853 LETM2Q2VYF4 491 aa20.56■□□□□ 0.88
KLHDC4-202ENST00000316853 LRRC8DQ7L1W4 858 aa20.56■□□□□ 0.88
KLHDC4-202ENST00000316853 OTOP2Q7RTS6 562 aa20.56■□□□□ 0.88
KLHDC4-202ENST00000316853 SERINC5Q86VE9 423 aa20.56■□□□□ 0.88
KLHDC4-202ENST00000316853 AFAP1L1Q8TED9 768 aa20.56■□□□□ 0.88
KLHDC4-202ENST00000316853 LMBR1Q8WVP7 490 aa20.56■□□□□ 0.88
KLHDC4-202ENST00000316853 TBC1D32Q96NH3 1257 aa20.56■□□□□ 0.88
KLHDC4-202ENST00000316853 BRMS1Q9HCU9 246 aa20.56■□□□□ 0.88
KLHDC4-202ENST00000316853 NRCAMQ92823 1304 aa20.55■□□□□ 0.88
KLHDC4-202ENST00000316853 ATG7O95352 703 aa20.55■□□□□ 0.88
KLHDC4-202ENST00000316853 HOXC8P31273 242 aa20.55■□□□□ 0.88
KLHDC4-202ENST00000316853 THPOP40225 353 aa20.55■□□□□ 0.88
KLHDC4-202ENST00000316853 IGBP1P78318 339 aa20.55■□□□□ 0.88
KLHDC4-202ENST00000316853 PPFIA1Q13136 1202 aa20.55■□□□□ 0.88
KLHDC4-202ENST00000316853 NR5A1Q13285 461 aa20.55■□□□□ 0.88
KLHDC4-202ENST00000316853 MIS18BP1Q6P0N0 1132 aa20.55■□□□□ 0.88
KLHDC4-202ENST00000316853 ABHD15Q6UXT9 468 aa20.55■□□□□ 0.88
KLHDC4-202ENST00000316853 GJA10Q969M2 543 aa20.55■□□□□ 0.88
KLHDC4-202ENST00000316853 LLPHQ9BRT6 129 aaKnown RBP20.55■□□□□ 0.88
KLHDC4-202ENST00000316853 FTOQ9C0B1 505 aaKnown RBP eCLIP20.55■□□□□ 0.88
KLHDC4-202ENST00000316853 TRPC6Q9Y210 931 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms