RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 FKBP1BP68106 108 aa17.33■□□□□ 0.36
LSM6-201ENST00000296581 SYT2Q8N9I0 419 aaPredicted RBP17.33■□□□□ 0.36
LSM6-201ENST00000296581 RGL1Q9NZL6 768 aa17.33■□□□□ 0.36
LSM6-201ENST00000296581 MAPK8IP1Q9UQF2 711 aa17.33■□□□□ 0.36
LSM6-201ENST00000296581 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.33■□□□□ 0.36
LSM6-201ENST00000296581 FCER1AP12319 257 aa17.32■□□□□ 0.36
LSM6-201ENST00000296581 CYP4A11Q02928 519 aa17.32■□□□□ 0.36
LSM6-201ENST00000296581 PSMD2Q13200 908 aa17.32■□□□□ 0.36
LSM6-201ENST00000296581 PABPC4Q13310 644 aaKnown RBP eCLIP17.32■□□□□ 0.361e-8■■■■■ 73.4
LSM6-201ENST00000296581 ITGB3BPQ13352 177 aaPredicted RBP17.32■□□□□ 0.36
LSM6-201ENST00000296581 GPAT2Q6NUI2 795 aa17.32■□□□□ 0.36
LSM6-201ENST00000296581 GPBP1Q86WP2 473 aa17.32■□□□□ 0.36
LSM6-201ENST00000296581 PLCD3Q8N3E9 789 aa17.32■□□□□ 0.36
LSM6-201ENST00000296581 KIAA0895Q8NCT3 520 aa17.32■□□□□ 0.36
LSM6-201ENST00000296581 SLC10A4Q96EP9 437 aa17.32■□□□□ 0.36
LSM6-201ENST00000296581 RRAGCQ9HB90 399 aa17.32■□□□□ 0.36
LSM6-201ENST00000296581 NRBP1Q9UHY1 535 aa17.32■□□□□ 0.36
LSM6-201ENST00000296581 CHMP2AO43633 222 aa17.32■□□□□ 0.36
LSM6-201ENST00000296581 CNMDO75829 334 aa17.32■□□□□ 0.36
LSM6-201ENST00000296581 EYA4O95677 639 aa17.32■□□□□ 0.36
LSM6-201ENST00000296581 SSBP05455 408 aaKnown RBP eCLIP17.32■□□□□ 0.36
LSM6-201ENST00000296581 SNAPC2Q13487 334 aa17.32■□□□□ 0.36
LSM6-201ENST00000296581 CCDC186Q7Z3E2 898 aa17.32■□□□□ 0.36
LSM6-201ENST00000296581 NEK9Q8TD19 979 aa17.32■□□□□ 0.36
LSM6-201ENST00000296581 DYDC2Q96IM9 177 aa17.32■□□□□ 0.36
LSM6-201ENST00000296581 SPATC1LQ9H0A9 340 aa17.32■□□□□ 0.36
LSM6-201ENST00000296581 TBC1D22BQ9NU19 505 aa17.32■□□□□ 0.36
LSM6-201ENST00000296581 LOXHD1Q8IVV2 1947 aa17.31■□□□□ 0.36
LSM6-201ENST00000296581 CDK11BP21127 795 aaKnown RBP17.31■□□□□ 0.36
LSM6-201ENST00000296581 CCDC144BQ3MJ40 725 aa17.31■□□□□ 0.36
LSM6-201ENST00000296581 ARSHQ5FYA8 562 aa17.31■□□□□ 0.36
LSM6-201ENST00000296581 GPRASP2Q96D09 838 aa17.31■□□□□ 0.36
LSM6-201ENST00000296581 ZNF408Q9H9D4 720 aa17.31■□□□□ 0.36
LSM6-201ENST00000296581 FRMD3A2A2Y4 597 aa17.31■□□□□ 0.36
LSM6-201ENST00000296581 IDEP14735 1019 aa17.31■□□□□ 0.36
LSM6-201ENST00000296581 OSBPP22059 807 aa17.31■□□□□ 0.36
LSM6-201ENST00000296581 COASYQ13057 564 aa17.31■□□□□ 0.36
LSM6-201ENST00000296581 CTTNQ14247 550 aaKnown RBP17.31■□□□□ 0.36
LSM6-201ENST00000296581 HSP90AA4PQ58FG1 418 aa17.31■□□□□ 0.36
LSM6-201ENST00000296581 APTXQ7Z2E3 356 aaKnown RBP17.31■□□□□ 0.36
LSM6-201ENST00000296581 INPP4AQ96PE3 977 aaPredicted RBP17.31■□□□□ 0.36
LSM6-201ENST00000296581 IMPACTQ9P2X3 320 aa17.31■□□□□ 0.36
LSM6-201ENST00000296581 PFASO15067 1338 aa17.31■□□□□ 0.36
LSM6-201ENST00000296581 KIAA1217Q5T5P2 1943 aa17.31■□□□□ 0.36
LSM6-201ENST00000296581 MAFGO15525 162 aa17.3■□□□□ 0.36
LSM6-201ENST00000296581 PEX10O60683 326 aa17.3■□□□□ 0.36
LSM6-201ENST00000296581 STAM2O75886 525 aa17.3■□□□□ 0.36
LSM6-201ENST00000296581 PTGS1P23219 599 aa17.3■□□□□ 0.36
LSM6-201ENST00000296581 CCNE1P24864 410 aa17.3■□□□□ 0.36
LSM6-201ENST00000296581 CBX1P83916 185 aa17.3■□□□□ 0.36
LSM6-201ENST00000296581 TTI2Q6NXR4 508 aa17.3■□□□□ 0.36
LSM6-201ENST00000296581 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.3■□□□□ 0.36
LSM6-201ENST00000296581 CCDC65Q8IXS2 484 aa17.3■□□□□ 0.36
LSM6-201ENST00000296581 DNERQ8NFT8 737 aa17.3■□□□□ 0.36
LSM6-201ENST00000296581 HPS3Q969F9 1004 aa17.3■□□□□ 0.36
LSM6-201ENST00000296581 SLC39A2Q9NP94 309 aa17.3■□□□□ 0.36
LSM6-201ENST00000296581 PANK4Q9NVE7 773 aa17.3■□□□□ 0.36
LSM6-201ENST00000296581 INTS13Q9NVM9 706 aa17.3■□□□□ 0.36
LSM6-201ENST00000296581 PMS1P54277 932 aaKnown RBP17.3■□□□□ 0.36
LSM6-201ENST00000296581 TPD52L1Q16890 204 aaPredicted RBP17.3■□□□□ 0.36
LSM6-201ENST00000296581 NLRX1Q86UT6 975 aa17.3■□□□□ 0.36
LSM6-201ENST00000296581 TPH2Q8IWU9 490 aa17.3■□□□□ 0.36
LSM6-201ENST00000296581 GUF1Q8N442 669 aaKnown RBP17.3■□□□□ 0.36
LSM6-201ENST00000296581 P2RX5Q93086 422 aa17.3■□□□□ 0.36
LSM6-201ENST00000296581 IWS1Q96ST2 819 aa17.3■□□□□ 0.36
LSM6-201ENST00000296581 KCNF1Q9H3M0 494 aa17.3■□□□□ 0.36
LSM6-201ENST00000296581 PKD2L1Q9P0L9 805 aa17.3■□□□□ 0.36
LSM6-201ENST00000296581 BICDL2A1A5D9 508 aa17.29■□□□□ 0.36
LSM6-201ENST00000296581 TESPA1A2RU30 521 aaPredicted RBP17.29■□□□□ 0.36
LSM6-201ENST00000296581 TRIM49BA6NDI0 452 aa17.29■□□□□ 0.36
LSM6-201ENST00000296581 COBLO75128 1261 aa17.29■□□□□ 0.36
LSM6-201ENST00000296581 MIER3Q7Z3K6 550 aa17.29■□□□□ 0.36
LSM6-201ENST00000296581 MOV10L1Q9BXT6 1211 aaKnown RBP17.29■□□□□ 0.36
LSM6-201ENST00000296581 BHMT2Q9H2M3 363 aa17.29■□□□□ 0.36
LSM6-201ENST00000296581 GBA2Q9HCG7 927 aaPredicted RBP17.29■□□□□ 0.36
LSM6-201ENST00000296581 RBPJLQ9UBG7 517 aa17.29■□□□□ 0.36
LSM6-201ENST00000296581 A0A1B0GTH6 734 aa17.28■□□□□ 0.36
LSM6-201ENST00000296581 DDX39AO00148 427 aaKnown RBP17.28■□□□□ 0.36
LSM6-201ENST00000296581 ATP9AO75110 1047 aa17.28■□□□□ 0.36
LSM6-201ENST00000296581 RGS20O76081 388 aa17.28■□□□□ 0.36
LSM6-201ENST00000296581 SLC25A27O95847 323 aa17.28■□□□□ 0.36
LSM6-201ENST00000296581 COPB2P35606 906 aa17.28■□□□□ 0.36
LSM6-201ENST00000296581 SPAG1Q07617 926 aa17.28■□□□□ 0.36
LSM6-201ENST00000296581 GIT2Q14161 759 aa17.28■□□□□ 0.36
LSM6-201ENST00000296581 VSTM4Q8IW00 320 aa17.28■□□□□ 0.36
LSM6-201ENST00000296581 ANKRD35Q8N283 1001 aa17.28■□□□□ 0.36
LSM6-201ENST00000296581 NACC1Q96RE7 527 aa17.28■□□□□ 0.36
LSM6-201ENST00000296581 PAGR1Q9BTK6 254 aa17.28■□□□□ 0.36
LSM6-201ENST00000296581 LIMA1Q9UHB6 759 aaKnown RBP17.28■□□□□ 0.36
LSM6-201ENST00000296581 PCDHA2Q9Y5H9 948 aa17.28■□□□□ 0.36
LSM6-201ENST00000296581 NPHP3-ACAD11A0A0J9YXS1 232 aa17.28■□□□□ 0.36
LSM6-201ENST00000296581 FAM26FQ5R3K3 315 aa17.28■□□□□ 0.36
LSM6-201ENST00000296581 CENPPQ6IPU0 288 aa17.28■□□□□ 0.36
LSM6-201ENST00000296581 TMC6Q7Z403 805 aa17.28■□□□□ 0.36
LSM6-201ENST00000296581 NOC3LQ8WTT2 800 aaKnown RBP17.28■□□□□ 0.36
LSM6-201ENST00000296581 DUSP9Q99956 384 aaKnown RBP17.28■□□□□ 0.36
LSM6-201ENST00000296581 LXNQ9BS40 222 aa17.28■□□□□ 0.36
LSM6-201ENST00000296581 TXNRD2Q9NNW7 524 aa17.28■□□□□ 0.36
LSM6-201ENST00000296581 WRAP73Q9P2S5 460 aaPredicted RBP17.28■□□□□ 0.36
LSM6-201ENST00000296581 ASTN1O14525 1302 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms