RNA–Protein interactions for RNA: ENST00000296449.9

CCDC36-201, Transcript of coiled-coil domain containing 36, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC36, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36-201ENST00000296449 NFS1Q9Y697 457 aa11.19□□□□□ -0.62
CCDC36-201ENST00000296449 ZNF335Q9H4Z2 1342 aaPredicted RBP11.18□□□□□ -0.62
CCDC36-201ENST00000296449 SNED1Q8TER0 1413 aa11.18□□□□□ -0.62
CCDC36-201ENST00000296449 GOLGA6L10A6NI86 522 aa11.18□□□□□ -0.62
CCDC36-201ENST00000296449 BTNL10A8MVZ5 291 aa11.18□□□□□ -0.62
CCDC36-201ENST00000296449 KCNK3O14649 394 aa11.18□□□□□ -0.62
CCDC36-201ENST00000296449 LDHBP07195 334 aaKnown RBP11.18□□□□□ -0.62
CCDC36-201ENST00000296449 SETQ01105 290 aaPredicted RBP11.18□□□□□ -0.62
CCDC36-201ENST00000296449 ACTN3Q08043 901 aaPredicted RBP11.18□□□□□ -0.62
CCDC36-201ENST00000296449 IFT88Q13099 833 aa11.18□□□□□ -0.62
CCDC36-201ENST00000296449 RPS6KA1Q15418 735 aa11.18□□□□□ -0.62
CCDC36-201ENST00000296449 SLC10A5Q5PT55 438 aa11.18□□□□□ -0.62
CCDC36-201ENST00000296449 FAM26FQ5R3K3 315 aa11.18□□□□□ -0.62
CCDC36-201ENST00000296449 MAPKAPK5Q8IW41 473 aa11.18□□□□□ -0.62
CCDC36-201ENST00000296449 OR2W6PQ8NHA6 318 aa11.18□□□□□ -0.62
CCDC36-201ENST00000296449 TAF4BQ92750 862 aa11.18□□□□□ -0.62
CCDC36-201ENST00000296449 CEP63Q96MT8 703 aa11.18□□□□□ -0.62
CCDC36-201ENST00000296449 EYA3Q99504 573 aa11.18□□□□□ -0.62
CCDC36-201ENST00000296449 UBA5Q9GZZ9 404 aa11.18□□□□□ -0.62
CCDC36-201ENST00000296449 VCPKMTQ9H867 229 aa11.18□□□□□ -0.62
CCDC36-201ENST00000296449 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.18□□□□□ -0.62
CCDC36-201ENST00000296449 IRS2Q9Y4H2 1338 aa11.18□□□□□ -0.62
CCDC36-201ENST00000296449 GCOM1H8Y6P7 765 aaPredicted RBP11.18□□□□□ -0.62
CCDC36-201ENST00000296449 MYZAPP0CAP1 466 aa11.18□□□□□ -0.62
CCDC36-201ENST00000296449 SMARCA1P28370 1054 aa11.18□□□□□ -0.62
CCDC36-201ENST00000296449 MARSP56192 900 aaKnown RBP11.18□□□□□ -0.62
CCDC36-201ENST00000296449 CUL1Q13616 776 aa11.18□□□□□ -0.62
CCDC36-201ENST00000296449 GRIK5Q16478 980 aa11.18□□□□□ -0.62
CCDC36-201ENST00000296449 SCFD2Q8WU76 684 aa11.18□□□□□ -0.62
CCDC36-201ENST00000296449 CYFIP2Q96F07 1278 aa11.18□□□□□ -0.62
CCDC36-201ENST00000296449 GANQ9H2C0 597 aa11.18□□□□□ -0.62
CCDC36-201ENST00000296449 CENPHQ9H3R5 247 aa11.18□□□□□ -0.62
CCDC36-201ENST00000296449 GOLPH3Q9H4A6 298 aa11.18□□□□□ -0.62
CCDC36-201ENST00000296449 PPANQ9NQ55 473 aaKnown RBP11.18□□□□□ -0.62
CCDC36-201ENST00000296449 SLC12A6Q9UHW9 1150 aa11.18□□□□□ -0.62
CCDC36-201ENST00000296449 BHMG1C9JSJ3 638 aaPredicted RBP11.17□□□□□ -0.62
CCDC36-201ENST00000296449 KIF4AO95239 1232 aa11.17□□□□□ -0.62
CCDC36-201ENST00000296449 CDK8P49336 464 aa11.17□□□□□ -0.62
CCDC36-201ENST00000296449 USP11P51784 963 aa11.17□□□□□ -0.62
CCDC36-201ENST00000296449 PPP4CP60510 307 aa11.17□□□□□ -0.62
CCDC36-201ENST00000296449 ZNF844Q08AG5 666 aa11.17□□□□□ -0.62
CCDC36-201ENST00000296449 ASIC2Q16515 512 aa11.17□□□□□ -0.62
CCDC36-201ENST00000296449 DDX42Q86XP3 938 aaKnown RBP eCLIP11.17□□□□□ -0.62
CCDC36-201ENST00000296449 CCDC13Q8IYE1 715 aa11.17□□□□□ -0.62
CCDC36-201ENST00000296449 GPATCH11Q8N954 259 aa11.17□□□□□ -0.62
CCDC36-201ENST00000296449 NEDD1Q8NHV4 660 aa11.17□□□□□ -0.62
CCDC36-201ENST00000296449 TACO1Q9BSH4 297 aaKnown RBP11.17□□□□□ -0.62
CCDC36-201ENST00000296449 PANK4Q9NVE7 773 aa11.17□□□□□ -0.62
CCDC36-201ENST00000296449 TBC1D7Q9P0N9 293 aa11.17□□□□□ -0.62
CCDC36-201ENST00000296449 USP17L5A8MUK1 530 aa11.17□□□□□ -0.62
CCDC36-201ENST00000296449 BAG3O95817 575 aa11.17□□□□□ -0.62
CCDC36-201ENST00000296449 GNA14O95837 355 aa11.17□□□□□ -0.62
CCDC36-201ENST00000296449 SMTNP53814 917 aa11.17□□□□□ -0.62
CCDC36-201ENST00000296449 PTK2Q05397 1052 aa11.17□□□□□ -0.62
CCDC36-201ENST00000296449 SEPT2Q15019 361 aa11.17□□□□□ -0.62
CCDC36-201ENST00000296449 NELFCDQ8IXH7 590 aa11.17□□□□□ -0.62
CCDC36-201ENST00000296449 ACTRT1Q8TDG2 376 aa11.17□□□□□ -0.62
CCDC36-201ENST00000296449 COA7Q96BR5 231 aa11.17□□□□□ -0.62
CCDC36-201ENST00000296449 CEP95Q96GE4 821 aa11.17□□□□□ -0.62
CCDC36-201ENST00000296449 NEUROG2Q9H2A3 272 aa11.17□□□□□ -0.62
CCDC36-201ENST00000296449 RIOX1Q9H6W3 641 aa11.17□□□□□ -0.62
CCDC36-201ENST00000296449 PCDHA2Q9Y5H9 948 aa11.17□□□□□ -0.62
CCDC36-201ENST00000296449 ROBO1Q9Y6N7 1651 aa11.16□□□□□ -0.62
CCDC36-201ENST00000296449 CEP104O60308 925 aa11.16□□□□□ -0.62
CCDC36-201ENST00000296449 RASSF9O75901 435 aa11.16□□□□□ -0.62
CCDC36-201ENST00000296449 ZBTB48P10074 688 aaPredicted RBP11.16□□□□□ -0.62
CCDC36-201ENST00000296449 ADCY7P51828 1080 aa11.16□□□□□ -0.62
CCDC36-201ENST00000296449 PPARDQ03181 441 aa11.16□□□□□ -0.62
CCDC36-201ENST00000296449 TBC1D9BQ66K14 1250 aa11.16□□□□□ -0.62
CCDC36-201ENST00000296449 C16orf86Q6ZW13 317 aa11.16□□□□□ -0.62
CCDC36-201ENST00000296449 LRRC57Q8N9N7 239 aa11.16□□□□□ -0.62
CCDC36-201ENST00000296449 LRRC45Q96CN5 670 aa11.16□□□□□ -0.62
CCDC36-201ENST00000296449 PBKQ96KB5 322 aa11.16□□□□□ -0.62
CCDC36-201ENST00000296449 ZNF287Q9HBT7 754 aa11.16□□□□□ -0.62
CCDC36-201ENST00000296449 NAV1Q8NEY1 1877 aa11.16□□□□□ -0.62
CCDC36-201ENST00000296449 GMNCA6NCL1 334 aa11.16□□□□□ -0.62
CCDC36-201ENST00000296449 hCG_1984214I3L0E3 225 aa11.16□□□□□ -0.62
CCDC36-201ENST00000296449 SART1O43290 800 aaKnown RBP11.16□□□□□ -0.62
CCDC36-201ENST00000296449 TRAPPC3O43617 180 aa11.16□□□□□ -0.62
CCDC36-201ENST00000296449 CTNNA1P35221 906 aaKnown RBP11.16□□□□□ -0.62
CCDC36-201ENST00000296449 MAP2K2P36507 400 aa11.16□□□□□ -0.62
CCDC36-201ENST00000296449 C10orf76Q5T2E6 689 aa11.16□□□□□ -0.62
CCDC36-201ENST00000296449 ZNF571Q7Z3V5 609 aaPredicted RBP11.16□□□□□ -0.62
CCDC36-201ENST00000296449 IRF2BP2Q7Z5L9 587 aa11.16□□□□□ -0.62
CCDC36-201ENST00000296449 ZNF713Q8N859 430 aaPredicted RBP11.16□□□□□ -0.62
CCDC36-201ENST00000296449 PROCA1Q8NCQ7 364 aaPredicted RBP11.16□□□□□ -0.62
CCDC36-201ENST00000296449 WDR66Q8TBY9 1149 aa11.16□□□□□ -0.62
CCDC36-201ENST00000296449 HAS1Q92839 578 aa11.16□□□□□ -0.62
CCDC36-201ENST00000296449 GJA10Q969M2 543 aa11.16□□□□□ -0.62
CCDC36-201ENST00000296449 CALR3Q96L12 384 aaKnown RBP11.16□□□□□ -0.62
CCDC36-201ENST00000296449 JPH2Q9BR39 696 aaPredicted RBP11.16□□□□□ -0.62
CCDC36-201ENST00000296449 AP1M1Q9BXS5 423 aa11.16□□□□□ -0.62
CCDC36-201ENST00000296449 KCTD10Q9H3F6 313 aa11.16□□□□□ -0.62
CCDC36-201ENST00000296449 DDX20Q9UHI6 824 aaKnown RBP11.16□□□□□ -0.62
CCDC36-201ENST00000296449 WNK3Q9BYP7 1800 aa11.15□□□□□ -0.62
CCDC36-201ENST00000296449 SSBP05455 408 aaKnown RBP eCLIP11.15□□□□□ -0.62
CCDC36-201ENST00000296449 FLT3P36888 993 aa11.15□□□□□ -0.62
CCDC36-201ENST00000296449 GSTO1P78417 241 aa11.15□□□□□ -0.62
CCDC36-201ENST00000296449 BIRC3Q13489 604 aa11.15□□□□□ -0.62
CCDC36-201ENST00000296449 PTPROQ16827 1216 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms