RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 UPF1Q92900 1129 aaKnown RBP eCLIP15.9■□□□□ 0.144e-7■■■■■ 26.8
PDLIM2-201ENST00000265810 JPH2Q9BR39 696 aaPredicted RBP15.9■□□□□ 0.14
PDLIM2-201ENST00000265810 PPP1R9AQ9ULJ8 1098 aa15.9■□□□□ 0.14
PDLIM2-201ENST00000265810 TMEM110-MUSTN1A8MSY1 372 aa15.9■□□□□ 0.14
PDLIM2-201ENST00000265810 MAGEA1P43355 309 aa15.9■□□□□ 0.14
PDLIM2-201ENST00000265810 COASYQ13057 564 aa15.9■□□□□ 0.14
PDLIM2-201ENST00000265810 ENGASEQ8NFI3 743 aa15.9■□□□□ 0.14
PDLIM2-201ENST00000265810 TRPM4Q8TD43 1214 aa15.9■□□□□ 0.14
PDLIM2-201ENST00000265810 KIAA1683Q9H0B3 1180 aa15.9■□□□□ 0.14
PDLIM2-201ENST00000265810 PRIMPOLQ96LW4 560 aa15.9■□□□□ 0.14
PDLIM2-201ENST00000265810 TRIM9Q9C026 710 aa15.9■□□□□ 0.14
PDLIM2-201ENST00000265810 ANKRD62A6NC57 917 aa15.89■□□□□ 0.13
PDLIM2-201ENST00000265810 TBX3O15119 743 aa15.89■□□□□ 0.13
PDLIM2-201ENST00000265810 PSMC2P35998 433 aaKnown RBP15.89■□□□□ 0.13
PDLIM2-201ENST00000265810 KIFAP3Q92845 792 aa15.89■□□□□ 0.13
PDLIM2-201ENST00000265810 PCDHA10Q9Y5I2 948 aa15.89■□□□□ 0.13
PDLIM2-201ENST00000265810 RETREG2Q8NC44 543 aa15.89■□□□□ 0.13
PDLIM2-201ENST00000265810 NEK9Q8TD19 979 aa15.89■□□□□ 0.13
PDLIM2-201ENST00000265810 DESI2Q9BSY9 194 aa15.89■□□□□ 0.13
PDLIM2-201ENST00000265810 TMEM206Q9H813 350 aa15.89■□□□□ 0.13
PDLIM2-201ENST00000265810 STX10O60499 249 aa15.89■□□□□ 0.13
PDLIM2-201ENST00000265810 TUBB4AP04350 444 aa15.89■□□□□ 0.13
PDLIM2-201ENST00000265810 PSMC5P62195 406 aa15.89■□□□□ 0.13
PDLIM2-201ENST00000265810 TAF1CQ15572 869 aaPredicted RBP15.89■□□□□ 0.13
PDLIM2-201ENST00000265810 MAN2A1Q16706 1144 aa15.89■□□□□ 0.13
PDLIM2-201ENST00000265810 SHROOM1Q2M3G4 852 aaPredicted RBP15.89■□□□□ 0.13
PDLIM2-201ENST00000265810 TKFCQ3LXA3 575 aa15.89■□□□□ 0.13
PDLIM2-201ENST00000265810 MB21D1Q8N884 522 aa15.89■□□□□ 0.13
PDLIM2-201ENST00000265810 SLC17A8Q8NDX2 589 aa15.89■□□□□ 0.13
PDLIM2-201ENST00000265810 HPS3Q969F9 1004 aa15.89■□□□□ 0.13
PDLIM2-201ENST00000265810 CCDC51Q96ER9 411 aa15.89■□□□□ 0.13
PDLIM2-201ENST00000265810 PPP1R16BQ96T49 567 aa15.89■□□□□ 0.13
PDLIM2-201ENST00000265810 CEP83Q9Y592 693 aa15.89■□□□□ 0.13
PDLIM2-201ENST00000265810 SRGAP2CP0DJJ0 459 aa15.89■□□□□ 0.13
PDLIM2-201ENST00000265810 COPB2P35606 906 aa15.89■□□□□ 0.13
PDLIM2-201ENST00000265810 LRRC63Q05C16 580 aa15.89■□□□□ 0.13
PDLIM2-201ENST00000265810 EXOC3L4Q17RC7 722 aa15.89■□□□□ 0.13
PDLIM2-201ENST00000265810 GIMAP8Q8ND71 665 aaPredicted RBP15.89■□□□□ 0.13
PDLIM2-201ENST00000265810 NPM3O75607 178 aaKnown RBP15.88■□□□□ 0.13
PDLIM2-201ENST00000265810 TFDP1Q14186 410 aa15.88■□□□□ 0.13
PDLIM2-201ENST00000265810 PAF1Q8N7H5 531 aa15.88■□□□□ 0.13
PDLIM2-201ENST00000265810 LMBR1Q8WVP7 490 aa15.88■□□□□ 0.13
PDLIM2-201ENST00000265810 MKL1Q969V6 931 aa15.88■□□□□ 0.13
PDLIM2-201ENST00000265810 MXRA8Q9BRK3 442 aa15.88■□□□□ 0.13
PDLIM2-201ENST00000265810 NAA15Q9BXJ9 866 aaKnown RBP15.88■□□□□ 0.13
PDLIM2-201ENST00000265810 THAP9Q9H5L6 903 aa15.88■□□□□ 0.13
PDLIM2-201ENST00000265810 TTLL4Q14679 1199 aa15.88■□□□□ 0.13
PDLIM2-201ENST00000265810 KRT31Q15323 416 aa15.88■□□□□ 0.13
PDLIM2-201ENST00000265810 RRAGDQ9NQL2 400 aaPredicted RBP15.88■□□□□ 0.13
PDLIM2-201ENST00000265810 NFIBO00712 420 aa15.88■□□□□ 0.13
PDLIM2-201ENST00000265810 ADPGKQ9BRR6 497 aa15.88■□□□□ 0.13
PDLIM2-201ENST00000265810 NUCKS1Q9H1E3 243 aaKnown RBP15.88■□□□□ 0.13
PDLIM2-201ENST00000265810 ZNF302Q9NR11 478 aa15.88■□□□□ 0.13
PDLIM2-201ENST00000265810 SLC9A2Q9UBY0 812 aa15.88■□□□□ 0.13
PDLIM2-201ENST00000265810 GABPAQ06546 454 aa15.87■□□□□ 0.13
PDLIM2-201ENST00000265810 Q3C1V9 767 aa15.87■□□□□ 0.13
PDLIM2-201ENST00000265810 TCP11X2Q5H9J9 407 aa15.87■□□□□ 0.13
PDLIM2-201ENST00000265810 JAKMIP2Q96AA8 810 aa15.87■□□□□ 0.13
PDLIM2-201ENST00000265810 JPH1Q9HDC5 661 aaPredicted RBP15.87■□□□□ 0.13
PDLIM2-201ENST00000265810 ZNF215Q9UL58 517 aaPredicted RBP15.87■□□□□ 0.13
PDLIM2-201ENST00000265810 TACC3Q9Y6A5 838 aa15.87■□□□□ 0.13
PDLIM2-201ENST00000265810 CETPP11597 493 aa15.87■□□□□ 0.13
PDLIM2-201ENST00000265810 STAT1P42224 750 aa15.87■□□□□ 0.13
PDLIM2-201ENST00000265810 CYFIP1Q7L576 1253 aa15.87■□□□□ 0.13
PDLIM2-201ENST00000265810 CACTINQ8WUQ7 758 aaKnown RBP15.87■□□□□ 0.13
PDLIM2-201ENST00000265810 IQCDQ96DY2 449 aa15.87■□□□□ 0.13
PDLIM2-201ENST00000265810 CAPZA3Q96KX2 299 aa15.87■□□□□ 0.13
PDLIM2-201ENST00000265810 RRAGCQ9HB90 399 aa15.87■□□□□ 0.13
PDLIM2-201ENST00000265810 KCNH7Q9NS40 1196 aa15.87■□□□□ 0.13
PDLIM2-201ENST00000265810 GPBP1L1Q9HC44 474 aaPredicted RBP15.87■□□□□ 0.13
PDLIM2-201ENST00000265810 NPHP3-ACAD11A0A0J9YXS1 232 aa15.87■□□□□ 0.13
PDLIM2-201ENST00000265810 K7ERI5 159 aa15.87■□□□□ 0.13
PDLIM2-201ENST00000265810 ACTN4O43707 911 aaKnown RBP15.87■□□□□ 0.13
PDLIM2-201ENST00000265810 GJC1P36383 396 aa15.87■□□□□ 0.13
PDLIM2-201ENST00000265810 RBL2Q08999 1139 aa15.87■□□□□ 0.13
PDLIM2-201ENST00000265810 TMCO3Q6UWJ1 677 aa15.87■□□□□ 0.13
PDLIM2-201ENST00000265810 PPM1KQ8N3J5 372 aa15.87■□□□□ 0.13
PDLIM2-201ENST00000265810 NLRP4Q96MN2 994 aa15.87■□□□□ 0.13
PDLIM2-201ENST00000265810 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.87■□□□□ 0.13
PDLIM2-201ENST00000265810 V9GYY5 206 aaPredicted RBP15.87■□□□□ 0.13
PDLIM2-201ENST00000265810 NFKBIEO00221 500 aa15.86■□□□□ 0.13
PDLIM2-201ENST00000265810 EYA4O95677 639 aa15.86■□□□□ 0.13
PDLIM2-201ENST00000265810 CTNNA2P26232 953 aa15.86■□□□□ 0.13
PDLIM2-201ENST00000265810 FAM193AP78312 1265 aa15.86■□□□□ 0.13
PDLIM2-201ENST00000265810 MTERF4Q7Z6M4 381 aaKnown RBP15.86■□□□□ 0.13
PDLIM2-201ENST00000265810 CRYBG1Q9Y4K1 1723 aa15.86■□□□□ 0.13
PDLIM2-201ENST00000265810 CTAGE15A4D2H0 777 aa15.86■□□□□ 0.13
PDLIM2-201ENST00000265810 MSH4O15457 936 aa15.86■□□□□ 0.13
PDLIM2-201ENST00000265810 CTAGE8P0CG41 777 aa15.86■□□□□ 0.13
PDLIM2-201ENST00000265810 CDC25BP30305 580 aa15.86■□□□□ 0.13
PDLIM2-201ENST00000265810 FXR2P51116 673 aaKnown RBP eCLIP15.86■□□□□ 0.13
PDLIM2-201ENST00000265810 CTAGE6Q86UF2 777 aa15.86■□□□□ 0.13
PDLIM2-201ENST00000265810 CTAGE4Q8IX94 777 aa15.86■□□□□ 0.13
PDLIM2-201ENST00000265810 MCPH1Q8NEM0 835 aa15.86■□□□□ 0.13
PDLIM2-201ENST00000265810 CHST13Q8NET6 341 aa15.86■□□□□ 0.13
PDLIM2-201ENST00000265810 SPATA33Q96N06 139 aa15.86■□□□□ 0.13
PDLIM2-201ENST00000265810 CD19P15391 556 aa15.86■□□□□ 0.13
PDLIM2-201ENST00000265810 DPYDQ12882 1025 aa15.86■□□□□ 0.13
PDLIM2-201ENST00000265810 GBA2Q9HCG7 927 aaPredicted RBP15.86■□□□□ 0.13
PDLIM2-201ENST00000265810 TUFT1Q9NNX1 390 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms