RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 CUL5Q93034 780 aa13.56□□□□□ -0.24
CHMP2B-201ENST00000263780 XPO6Q96QU8 1125 aaKnown RBP13.56□□□□□ -0.24
CHMP2B-201ENST00000263780 TRIM6Q9C030 488 aaPredicted RBP13.56□□□□□ -0.24
CHMP2B-201ENST00000263780 ZMYND12Q9H0C1 365 aa13.56□□□□□ -0.24
CHMP2B-201ENST00000263780 DCP1AQ9NPI6 582 aaPredicted RBP13.56□□□□□ -0.24
CHMP2B-201ENST00000263780 UTP11Q9Y3A2 253 aaKnown RBP13.56□□□□□ -0.24
CHMP2B-201ENST00000263780 KRIT1O00522 736 aa13.55□□□□□ -0.24
CHMP2B-201ENST00000263780 KIF3CO14782 793 aa13.55□□□□□ -0.24
CHMP2B-201ENST00000263780 ATP6V1G2O95670 118 aa13.55□□□□□ -0.24
CHMP2B-201ENST00000263780 ELF3P78545 371 aaPredicted RBP13.55□□□□□ -0.24
CHMP2B-201ENST00000263780 BYSLQ13895 437 aaKnown RBP13.55□□□□□ -0.24
CHMP2B-201ENST00000263780 RAPGEF1Q13905 1077 aa13.55□□□□□ -0.24
CHMP2B-201ENST00000263780 UBE4AQ14139 1066 aa13.55□□□□□ -0.24
CHMP2B-201ENST00000263780 PARP10Q53GL7 1025 aa13.55□□□□□ -0.24
CHMP2B-201ENST00000263780 ERMARDQ5T6L9 678 aa13.55□□□□□ -0.24
CHMP2B-201ENST00000263780 SYCE1Q8N0S2 351 aa13.55□□□□□ -0.24
CHMP2B-201ENST00000263780 OR2W6PQ8NHA6 318 aa13.55□□□□□ -0.24
CHMP2B-201ENST00000263780 HPS3Q969F9 1004 aa13.55□□□□□ -0.24
CHMP2B-201ENST00000263780 NOL4O94818 638 aa13.55□□□□□ -0.24
CHMP2B-201ENST00000263780 SOGA3Q5TF21 947 aa13.55□□□□□ -0.24
CHMP2B-201ENST00000263780 LRCH2Q5VUJ6 765 aa13.55□□□□□ -0.24
CHMP2B-201ENST00000263780 TMC3Q7Z5M5 1100 aa13.55□□□□□ -0.24
CHMP2B-201ENST00000263780 CCDC63Q8NA47 563 aa13.55□□□□□ -0.24
CHMP2B-201ENST00000263780 MMTAG2Q9BU76 263 aaKnown RBP13.55□□□□□ -0.24
CHMP2B-201ENST00000263780 FAM129AQ9BZQ8 928 aa13.55□□□□□ -0.24
CHMP2B-201ENST00000263780 NOD2Q9HC29 1040 aa13.55□□□□□ -0.24
CHMP2B-201ENST00000263780 ADAMTS1Q9UHI8 967 aa13.55□□□□□ -0.24
CHMP2B-201ENST00000263780 PACSIN2Q9UNF0 486 aaPredicted RBP13.55□□□□□ -0.24
CHMP2B-201ENST00000263780 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.55□□□□□ -0.24
CHMP2B-201ENST00000263780 A0A087X0T9 212 aa13.54□□□□□ -0.24
CHMP2B-201ENST00000263780 TRAF5O00463 557 aa13.54□□□□□ -0.24
CHMP2B-201ENST00000263780 FAM228BP0C875 321 aa13.54□□□□□ -0.24
CHMP2B-201ENST00000263780 EPS15P42566 896 aa13.54□□□□□ -0.24
CHMP2B-201ENST00000263780 GRB10Q13322 594 aa13.54□□□□□ -0.24
CHMP2B-201ENST00000263780 E2F5Q15329 346 aa13.54□□□□□ -0.24
CHMP2B-201ENST00000263780 PPP1R7Q15435 360 aa13.54□□□□□ -0.24
CHMP2B-201ENST00000263780 ZKSCAN8Q15776 578 aaPredicted RBP13.54□□□□□ -0.24
CHMP2B-201ENST00000263780 MAB21L3Q8N8X9 362 aa13.54□□□□□ -0.24
CHMP2B-201ENST00000263780 SEC14L1Q92503 715 aa13.54□□□□□ -0.24
CHMP2B-201ENST00000263780 TLCD1Q96CP7 247 aa13.54□□□□□ -0.24
CHMP2B-201ENST00000263780 CNOT8Q9UFF9 292 aaKnown RBP13.54□□□□□ -0.24
CHMP2B-201ENST00000263780 MAD2L2Q9UI95 211 aa13.54□□□□□ -0.24
CHMP2B-201ENST00000263780 ZNF142P52746 1687 aaPredicted RBP13.54□□□□□ -0.24
CHMP2B-201ENST00000263780 PHF20L1A8MW92 1017 aa13.54□□□□□ -0.24
CHMP2B-201ENST00000263780 F8VZ95 297 aa13.54□□□□□ -0.24
CHMP2B-201ENST00000263780 FXR2P51116 673 aaKnown RBP eCLIP13.54□□□□□ -0.24
CHMP2B-201ENST00000263780 NAPAP54920 295 aa13.54□□□□□ -0.24
CHMP2B-201ENST00000263780 MARSP56192 900 aaKnown RBP13.54□□□□□ -0.24
CHMP2B-201ENST00000263780 IRX1P78414 480 aaPredicted RBP13.54□□□□□ -0.24
CHMP2B-201ENST00000263780 TFAP4Q01664 338 aa13.54□□□□□ -0.24
CHMP2B-201ENST00000263780 PDIA5Q14554 519 aa13.54□□□□□ -0.24
CHMP2B-201ENST00000263780 HIBCHQ6NVY1 386 aaPredicted RBP13.54□□□□□ -0.24
CHMP2B-201ENST00000263780 RAD54LQ92698 747 aa13.54□□□□□ -0.24
CHMP2B-201ENST00000263780 NSRP1Q9H0G5 558 aaKnown RBP13.54□□□□□ -0.24
CHMP2B-201ENST00000263780 RAB17Q9H0T7 212 aa13.54□□□□□ -0.24
CHMP2B-201ENST00000263780 BMP2KQ9NSY1 1161 aaPredicted RBP13.54□□□□□ -0.24
CHMP2B-201ENST00000263780 BLOC1S4Q9NUP1 217 aa13.54□□□□□ -0.24
CHMP2B-201ENST00000263780 SAMD15Q9P1V8 674 aa13.54□□□□□ -0.24
CHMP2B-201ENST00000263780 CCDC189A1A4V9 331 aa13.53□□□□□ -0.24
CHMP2B-201ENST00000263780 BUB1BO60566 1050 aaPredicted RBP13.53□□□□□ -0.24
CHMP2B-201ENST00000263780 ADAMTS2O95450 1211 aa13.53□□□□□ -0.24
CHMP2B-201ENST00000263780 DHX9Q08211 1270 aaKnown RBP13.53□□□□□ -0.24
CHMP2B-201ENST00000263780 NAA25Q14CX7 972 aa13.53□□□□□ -0.24
CHMP2B-201ENST00000263780 CLUL1Q15846 466 aa13.53□□□□□ -0.24
CHMP2B-201ENST00000263780 SUSD4Q5VX71 490 aa13.53□□□□□ -0.24
CHMP2B-201ENST00000263780 DYMQ7RTS9 669 aa13.53□□□□□ -0.24
CHMP2B-201ENST00000263780 RASGEF1CQ8N431 466 aa13.53□□□□□ -0.24
CHMP2B-201ENST00000263780 CEP120Q8N960 986 aa13.53□□□□□ -0.24
CHMP2B-201ENST00000263780 DDX17Q92841 729 aaKnown RBP13.53□□□□□ -0.24
CHMP2B-201ENST00000263780 SUCLA2Q9P2R7 463 aaPredicted RBP13.53□□□□□ -0.24
CHMP2B-201ENST00000263780 BAIAP2L1Q9UHR4 511 aa13.53□□□□□ -0.24
CHMP2B-201ENST00000263780 ZBTB1Q9Y2K1 713 aa13.53□□□□□ -0.24
CHMP2B-201ENST00000263780 DIS3Q9Y2L1 958 aaKnown RBP13.53□□□□□ -0.24
CHMP2B-201ENST00000263780 NOC2LQ9Y3T9 749 aaKnown RBP13.53□□□□□ -0.24
CHMP2B-201ENST00000263780 GOLGA6L10A0A0M3HER8 536 aa13.53□□□□□ -0.24
CHMP2B-201ENST00000263780 DAPK3O43293 454 aa13.53□□□□□ -0.24
CHMP2B-201ENST00000263780 CTNND1O60716 968 aaKnown RBP13.53□□□□□ -0.24
CHMP2B-201ENST00000263780 ATP2C2O75185 946 aa13.53□□□□□ -0.24
CHMP2B-201ENST00000263780 NEBLO76041 1014 aa13.53□□□□□ -0.24
CHMP2B-201ENST00000263780 KRT79Q5XKE5 535 aa13.53□□□□□ -0.24
CHMP2B-201ENST00000263780 VPS36Q86VN1 386 aa13.53□□□□□ -0.24
CHMP2B-201ENST00000263780 GPIHBP1Q8IV16 184 aa13.53□□□□□ -0.24
CHMP2B-201ENST00000263780 CASZ1Q86V15 1759 aa13.53□□□□□ -0.24
CHMP2B-201ENST00000263780 A0A0A6YYK5 440 aaPredicted RBP13.52□□□□□ -0.24
CHMP2B-201ENST00000263780 CCDC169A6NNP5 214 aa13.52□□□□□ -0.24
CHMP2B-201ENST00000263780 PPFIA2O75334 1257 aa13.52□□□□□ -0.24
CHMP2B-201ENST00000263780 FLOT1O75955 427 aa13.52□□□□□ -0.24
CHMP2B-201ENST00000263780 GYG1P46976 350 aa13.52□□□□□ -0.24
CHMP2B-201ENST00000263780 CALCRLQ16602 461 aa13.52□□□□□ -0.24
CHMP2B-201ENST00000263780 PEX26Q7Z412 305 aa13.52□□□□□ -0.24
CHMP2B-201ENST00000263780 DDX42Q86XP3 938 aaKnown RBP eCLIP13.52□□□□□ -0.24
CHMP2B-201ENST00000263780 TRIM59Q8IWR1 403 aa13.52□□□□□ -0.24
CHMP2B-201ENST00000263780 LRRC57Q8N9N7 239 aa13.52□□□□□ -0.24
CHMP2B-201ENST00000263780 FAXDC2Q96IV6 333 aa13.52□□□□□ -0.24
CHMP2B-201ENST00000263780 SPZ1Q9BXG8 430 aa13.52□□□□□ -0.24
CHMP2B-201ENST00000263780 STMN4Q9H169 189 aaPredicted RBP13.52□□□□□ -0.24
CHMP2B-201ENST00000263780 EBF2Q9HAK2 575 aa13.52□□□□□ -0.24
CHMP2B-201ENST00000263780 INTUQ9ULD6 942 aa13.52□□□□□ -0.24
CHMP2B-201ENST00000263780 SLC12A4Q9UP95 1085 aa13.52□□□□□ -0.24
CHMP2B-201ENST00000263780 DCCP43146 1447 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms