RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 RABGEF1Q9UJ41 708 aa13.15□□□□□ -0.3
PFDN1-201ENST00000261813 Q9Y3F1 56 aa13.15□□□□□ -0.3
PFDN1-201ENST00000261813 IGLV3-22A0A075B6J6 115 aa13.14□□□□□ -0.31
PFDN1-201ENST00000261813 CCDC194A0A1B0GVG4 234 aa13.14□□□□□ -0.31
PFDN1-201ENST00000261813 MEIS1O00470 390 aa13.14□□□□□ -0.31
PFDN1-201ENST00000261813 NKRFO15226 690 aaKnown RBP eCLIP13.14□□□□□ -0.31
PFDN1-201ENST00000261813 C6orf222P0C671 652 aaPredicted RBP13.14□□□□□ -0.31
PFDN1-201ENST00000261813 ARP10275 920 aa13.14□□□□□ -0.31
PFDN1-201ENST00000261813 TGFB3P10600 412 aa13.14□□□□□ -0.31
PFDN1-201ENST00000261813 UBA1P22314 1058 aaKnown RBP13.14□□□□□ -0.31
PFDN1-201ENST00000261813 CIITAP33076 1130 aa13.14□□□□□ -0.31
PFDN1-201ENST00000261813 ARHGAP1Q07960 439 aa13.14□□□□□ -0.31
PFDN1-201ENST00000261813 MTMR1Q13613 665 aa13.14□□□□□ -0.31
PFDN1-201ENST00000261813 INF2Q27J81 1249 aa13.14□□□□□ -0.31
PFDN1-201ENST00000261813 CCSAPQ6IQ19 270 aaPredicted RBP13.14□□□□□ -0.31
PFDN1-201ENST00000261813 KCNV1Q6PIU1 500 aa13.14□□□□□ -0.31
PFDN1-201ENST00000261813 UBE2Q1Q7Z7E8 422 aa13.14□□□□□ -0.31
PFDN1-201ENST00000261813 OR6J1Q8NGC5 347 aa13.14□□□□□ -0.31
PFDN1-201ENST00000261813 BCAS3Q9H6U6 928 aa13.14□□□□□ -0.31
PFDN1-201ENST00000261813 MYH7BA7E2Y1 1941 aa13.13□□□□□ -0.31
PFDN1-201ENST00000261813 VPS37CA5D8V6 355 aaPredicted RBP13.13□□□□□ -0.31
PFDN1-201ENST00000261813 KIF28PB7ZC32 967 aa13.13□□□□□ -0.31
PFDN1-201ENST00000261813 DNM1LO00429 736 aa13.13□□□□□ -0.31
PFDN1-201ENST00000261813 SORBS3O60504 671 aa13.13□□□□□ -0.31
PFDN1-201ENST00000261813 ATP9AO75110 1047 aa13.13□□□□□ -0.31
PFDN1-201ENST00000261813 FARP2O94887 1054 aaPredicted RBP13.13□□□□□ -0.31
PFDN1-201ENST00000261813 GGPS1O95749 300 aa13.13□□□□□ -0.31
PFDN1-201ENST00000261813 CAPN2P17655 700 aa13.13□□□□□ -0.31
PFDN1-201ENST00000261813 CST5P28325 142 aaPredicted RBP13.13□□□□□ -0.31
PFDN1-201ENST00000261813 ZNF76P36508 570 aa13.13□□□□□ -0.31
PFDN1-201ENST00000261813 USP11P51784 963 aa13.13□□□□□ -0.31
PFDN1-201ENST00000261813 BEX3Q00994 111 aa13.13□□□□□ -0.31
PFDN1-201ENST00000261813 RNF180Q86T96 592 aa13.13□□□□□ -0.31
PFDN1-201ENST00000261813 ARRDC4Q8NCT1 418 aa13.13□□□□□ -0.31
PFDN1-201ENST00000261813 LENG9Q96B70 501 aa13.13□□□□□ -0.31
PFDN1-201ENST00000261813 GBP4Q96PP9 640 aa13.13□□□□□ -0.31
PFDN1-201ENST00000261813 AP5M1Q9H0R1 490 aa13.13□□□□□ -0.31
PFDN1-201ENST00000261813 CDHR5Q9HBB8 845 aa13.13□□□□□ -0.31
PFDN1-201ENST00000261813 NPDC1Q9NQX5 325 aaPredicted RBP13.13□□□□□ -0.31
PFDN1-201ENST00000261813 MTMR6Q9Y217 621 aa13.13□□□□□ -0.31
PFDN1-201ENST00000261813 TDP2O95551 362 aa13.12□□□□□ -0.31
PFDN1-201ENST00000261813 F13A1P00488 732 aa13.12□□□□□ -0.31
PFDN1-201ENST00000261813 GH1P01241 217 aa13.12□□□□□ -0.31
PFDN1-201ENST00000261813 COL6A1P12109 1028 aa13.12□□□□□ -0.31
PFDN1-201ENST00000261813 KCNA2P16389 499 aa13.12□□□□□ -0.31
PFDN1-201ENST00000261813 FSCN1Q16658 493 aaKnown RBP13.12□□□□□ -0.31
PFDN1-201ENST00000261813 CELF3Q5SZQ8 465 aaKnown RBP13.12□□□□□ -0.31
PFDN1-201ENST00000261813 MYSM1Q5VVJ2 828 aa13.12□□□□□ -0.31
PFDN1-201ENST00000261813 NIPA1Q7RTP0 329 aa13.12□□□□□ -0.31
PFDN1-201ENST00000261813 PLA2G4DQ86XP0 818 aa13.12□□□□□ -0.31
PFDN1-201ENST00000261813 EMID1Q96A84 441 aaPredicted RBP13.12□□□□□ -0.31
PFDN1-201ENST00000261813 PAWRQ96IZ0 340 aaKnown RBP13.12□□□□□ -0.31
PFDN1-201ENST00000261813 CDHR1Q96JP9 859 aa13.12□□□□□ -0.31
PFDN1-201ENST00000261813 SENP7Q9BQF6 1050 aa13.12□□□□□ -0.31
PFDN1-201ENST00000261813 HTATIP2Q9BUP3 242 aa13.12□□□□□ -0.31
PFDN1-201ENST00000261813 FOXP1Q9H334 677 aaPredicted RBP13.12□□□□□ -0.31
PFDN1-201ENST00000261813 SPC25Q9HBM1 224 aa13.12□□□□□ -0.31
PFDN1-201ENST00000261813 KCNH7Q9NS40 1196 aa13.12□□□□□ -0.31
PFDN1-201ENST00000261813 PKD2L1Q9P0L9 805 aa13.12□□□□□ -0.31
PFDN1-201ENST00000261813 TELO2Q9Y4R8 837 aa13.12□□□□□ -0.31
PFDN1-201ENST00000261813 CYP3A7-CYP3A51PA0A087WV96 503 aa13.11□□□□□ -0.31
PFDN1-201ENST00000261813 A6NJR5 290 aa13.11□□□□□ -0.31
PFDN1-201ENST00000261813 KBTBD13C9JR72 458 aa13.11□□□□□ -0.31
PFDN1-201ENST00000261813 WNT7AO00755 349 aa13.11□□□□□ -0.31
PFDN1-201ENST00000261813 MAFGO15525 162 aa13.11□□□□□ -0.31
PFDN1-201ENST00000261813 CYP3A7P24462 503 aa13.11□□□□□ -0.31
PFDN1-201ENST00000261813 LAMC2Q13753 1193 aa13.11□□□□□ -0.31
PFDN1-201ENST00000261813 GNL2Q13823 731 aaKnown RBP13.11□□□□□ -0.31
PFDN1-201ENST00000261813 NEDD9Q14511 834 aa13.11□□□□□ -0.31
PFDN1-201ENST00000261813 KCNA10Q16322 511 aa13.11□□□□□ -0.31
PFDN1-201ENST00000261813 LETM2Q2VYF4 491 aa13.11□□□□□ -0.31
PFDN1-201ENST00000261813 PRR16Q569H4 304 aa13.11□□□□□ -0.31
PFDN1-201ENST00000261813 GNASQ5JWF2 1037 aa13.11□□□□□ -0.31
PFDN1-201ENST00000261813 ATL3Q6DD88 541 aa13.11□□□□□ -0.31
PFDN1-201ENST00000261813 CLEC17AQ6ZS10 378 aa13.11□□□□□ -0.31
PFDN1-201ENST00000261813 BRAPQ7Z569 592 aa13.11□□□□□ -0.31
PFDN1-201ENST00000261813 NEK8Q86SG6 692 aa13.11□□□□□ -0.31
PFDN1-201ENST00000261813 DHX37Q8IY37 1157 aaKnown RBP13.11□□□□□ -0.31
PFDN1-201ENST00000261813 AFG1LQ8WV93 481 aa13.11□□□□□ -0.31
PFDN1-201ENST00000261813 MBOAT7Q96N66 472 aa13.11□□□□□ -0.31
PFDN1-201ENST00000261813 AGO4Q9HCK5 861 aaKnown RBP13.11□□□□□ -0.31
PFDN1-201ENST00000261813 PHF24Q9UPV7 400 aa13.11□□□□□ -0.31
PFDN1-201ENST00000261813 GOLGA6L22H0YM25 854 aa13.1□□□□□ -0.31
PFDN1-201ENST00000261813 ASGR1P07306 291 aa13.1□□□□□ -0.31
PFDN1-201ENST00000261813 MMP3P08254 477 aa13.1□□□□□ -0.31
PFDN1-201ENST00000261813 PTMSP20962 102 aa13.1□□□□□ -0.31
PFDN1-201ENST00000261813 U2AF2P26368 475 aaKnown RBP eCLIP13.1□□□□□ -0.312e-7■■■□□ 17.7
PFDN1-201ENST00000261813 CPT1AP50416 773 aa13.1□□□□□ -0.31
PFDN1-201ENST00000261813 ACLYP53396 1101 aa13.1□□□□□ -0.31
PFDN1-201ENST00000261813 SETQ01105 290 aaPredicted RBP13.1□□□□□ -0.31
PFDN1-201ENST00000261813 ITGB3BPQ13352 177 aaPredicted RBP13.1□□□□□ -0.31
PFDN1-201ENST00000261813 CSPP1Q1MSJ5 1256 aa13.1□□□□□ -0.31
PFDN1-201ENST00000261813 HSDL1Q3SXM5 330 aa13.1□□□□□ -0.31
PFDN1-201ENST00000261813 Q4G0T1 1027 aa13.1□□□□□ -0.31
PFDN1-201ENST00000261813 MCTP1Q6DN14 999 aa13.1□□□□□ -0.31
PFDN1-201ENST00000261813 MOXD1Q6UVY6 613 aa13.1□□□□□ -0.31
PFDN1-201ENST00000261813 METTL7BQ6UX53 244 aa13.1□□□□□ -0.31
PFDN1-201ENST00000261813 CYFIP1Q7L576 1253 aa13.1□□□□□ -0.31
PFDN1-201ENST00000261813 UIMC1Q96RL1 719 aa13.1□□□□□ -0.31
PFDN1-201ENST00000261813 TSEN34Q9BSV6 310 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms