RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 PABPC4Q13310 644 aaKnown RBP eCLIP17.61■□□□□ 0.416e-7■■□□□ 12.2
SREBF1-201ENST00000261646 FAM47EQ6ZV65 393 aa17.61■□□□□ 0.41
SREBF1-201ENST00000261646 DDX42Q86XP3 938 aaKnown RBP eCLIP17.61■□□□□ 0.41
SREBF1-201ENST00000261646 GBP7Q8N8V2 638 aaPredicted RBP17.61■□□□□ 0.41
SREBF1-201ENST00000261646 DDX25Q9UHL0 483 aaKnown RBP17.61■□□□□ 0.41
SREBF1-201ENST00000261646 CEP128Q6ZU80 1094 aa17.61■□□□□ 0.41
SREBF1-201ENST00000261646 STAG2Q8N3U4 1231 aa17.61■□□□□ 0.41
SREBF1-201ENST00000261646 MIPOL1Q8TD10 442 aa17.61■□□□□ 0.41
SREBF1-201ENST00000261646 P3H4Q92791 437 aa17.61■□□□□ 0.41
SREBF1-201ENST00000261646 CLIC2O15247 247 aa17.61■□□□□ 0.41
SREBF1-201ENST00000261646 NMT2O60551 498 aa17.61■□□□□ 0.41
SREBF1-201ENST00000261646 EMILIN3Q9NT22 766 aa17.61■□□□□ 0.41
SREBF1-201ENST00000261646 DIAPH2O60879 1101 aa17.61■□□□□ 0.41
SREBF1-201ENST00000261646 OPHN1O60890 802 aa17.61■□□□□ 0.41
SREBF1-201ENST00000261646 PLEKP08567 350 aaPredicted RBP17.61■□□□□ 0.41
SREBF1-201ENST00000261646 LMNB1P20700 586 aa17.61■□□□□ 0.41
SREBF1-201ENST00000261646 ADCY2Q08462 1091 aa17.61■□□□□ 0.41
SREBF1-201ENST00000261646 ARHGEF18Q6ZSZ5 1173 aa17.61■□□□□ 0.41
SREBF1-201ENST00000261646 TRIM37O94972 964 aa17.6■□□□□ 0.41
SREBF1-201ENST00000261646 CYB5D1Q6P9G0 228 aa17.6■□□□□ 0.41
SREBF1-201ENST00000261646 PHLDB2Q86SQ0 1253 aa17.6■□□□□ 0.41
SREBF1-201ENST00000261646 WDR66Q8TBY9 1149 aa17.6■□□□□ 0.41
SREBF1-201ENST00000261646 AGXT2Q9BYV1 514 aa17.6■□□□□ 0.41
SREBF1-201ENST00000261646 AZI2Q9H6S1 392 aa17.6■□□□□ 0.41
SREBF1-201ENST00000261646 INTS13Q9NVM9 706 aa17.6■□□□□ 0.41
SREBF1-201ENST00000261646 CEP72Q9P209 647 aa17.6■□□□□ 0.41
SREBF1-201ENST00000261646 ATF2P15336 505 aa17.6■□□□□ 0.41
SREBF1-201ENST00000261646 ALX1Q15699 326 aa17.6■□□□□ 0.41
SREBF1-201ENST00000261646 TPH2Q8IWU9 490 aa17.6■□□□□ 0.41
SREBF1-201ENST00000261646 CPVLQ9H3G5 476 aa17.6■□□□□ 0.41
SREBF1-201ENST00000261646 TOB1P50616 345 aaPredicted RBP17.6■□□□□ 0.41
SREBF1-201ENST00000261646 PPP4R3AQ6IN85 833 aa17.6■□□□□ 0.41
SREBF1-201ENST00000261646 DDX23Q9BUQ8 820 aaKnown RBP17.6■□□□□ 0.41
SREBF1-201ENST00000261646 VCX3BQ9H321 246 aa17.6■□□□□ 0.41
SREBF1-201ENST00000261646 ATP8A2Q9NTI2 1148 aa17.6■□□□□ 0.41
SREBF1-201ENST00000261646 CAPN6Q9Y6Q1 641 aa17.6■□□□□ 0.41
SREBF1-201ENST00000261646 ARHGEF35A5YM69 484 aa17.59■□□□□ 0.41
SREBF1-201ENST00000261646 HSPA1LP34931 641 aa17.59■□□□□ 0.41
SREBF1-201ENST00000261646 PRR16Q569H4 304 aa17.59■□□□□ 0.41
SREBF1-201ENST00000261646 C10orf76Q5T2E6 689 aa17.59■□□□□ 0.41
SREBF1-201ENST00000261646 PAPD7Q5XG87 772 aaKnown RBP17.59■□□□□ 0.41
SREBF1-201ENST00000261646 BRINP3Q76B58 766 aa17.59■□□□□ 0.41
SREBF1-201ENST00000261646 SUGP1Q8IWZ8 645 aaKnown RBP17.59■□□□□ 0.41
SREBF1-201ENST00000261646 RILPQ96NA2 401 aa17.59■□□□□ 0.41
SREBF1-201ENST00000261646 TXLNGQ9NUQ3 528 aa17.59■□□□□ 0.41
SREBF1-201ENST00000261646 EVI5O60447 810 aa17.59■□□□□ 0.41
SREBF1-201ENST00000261646 UFL1O94874 794 aa17.59■□□□□ 0.41
SREBF1-201ENST00000261646 STK4Q13043 487 aa17.59■□□□□ 0.41
SREBF1-201ENST00000261646 ZNF211Q13398 564 aaPredicted RBP17.59■□□□□ 0.41
SREBF1-201ENST00000261646 GCNT4Q9P109 453 aa17.59■□□□□ 0.41
SREBF1-201ENST00000261646 SCOCQ9UIL1 159 aa17.59■□□□□ 0.41
SREBF1-201ENST00000261646 GRID2IPA4D2P6 1211 aa17.59■□□□□ 0.41
SREBF1-201ENST00000261646 TRIP13Q15645 432 aaPredicted RBP17.59■□□□□ 0.41
SREBF1-201ENST00000261646 PFKFB3Q16875 520 aaPredicted RBP17.59■□□□□ 0.41
SREBF1-201ENST00000261646 UNC13DQ70J99 1090 aa17.59■□□□□ 0.41
SREBF1-201ENST00000261646 LRRC47Q8N1G4 583 aaKnown RBP17.59■□□□□ 0.41
SREBF1-201ENST00000261646 PSTPIP2Q9H939 334 aa17.59■□□□□ 0.41
SREBF1-201ENST00000261646 ETNK1Q9HBU6 452 aa17.59■□□□□ 0.41
SREBF1-201ENST00000261646 RAD51CO43502 376 aa17.58■□□□□ 0.41
SREBF1-201ENST00000261646 MYCNP04198 464 aaPredicted RBP17.58■□□□□ 0.41
SREBF1-201ENST00000261646 APBB1IPQ7Z5R6 666 aaPredicted RBP17.58■□□□□ 0.41
SREBF1-201ENST00000261646 RAB3IL1Q8TBN0 382 aa17.58■□□□□ 0.41
SREBF1-201ENST00000261646 HDAC7Q8WUI4 952 aa17.58■□□□□ 0.41
SREBF1-201ENST00000261646 PITPNM3Q9BZ71 974 aa17.58■□□□□ 0.41
SREBF1-201ENST00000261646 AGTPBP1Q9UPW5 1226 aa17.58■□□□□ 0.41
SREBF1-201ENST00000261646 USH1CQ9Y6N9 552 aa17.58■□□□□ 0.41
SREBF1-201ENST00000261646 GCFC2P16383 781 aaKnown RBP17.58■□□□□ 0.41
SREBF1-201ENST00000261646 ELOA2Q8IYF1 753 aaPredicted RBP17.58■□□□□ 0.41
SREBF1-201ENST00000261646 ANKRD35Q8N283 1001 aa17.58■□□□□ 0.41
SREBF1-201ENST00000261646 PPM1KQ8N3J5 372 aa17.58■□□□□ 0.41
SREBF1-201ENST00000261646 DYNLL2Q96FJ2 89 aa17.58■□□□□ 0.41
SREBF1-201ENST00000261646 TYW1Q9NV66 732 aaKnown RBP17.58■□□□□ 0.41
SREBF1-201ENST00000261646 NOC2LQ9Y3T9 749 aaKnown RBP17.58■□□□□ 0.41
SREBF1-201ENST00000261646 ARHGAP42A6NI28 874 aa17.58■□□□□ 0.4
SREBF1-201ENST00000261646 USH1GQ495M9 461 aa17.58■□□□□ 0.4
SREBF1-201ENST00000261646 USP17L2Q6R6M4 530 aa17.58■□□□□ 0.4
SREBF1-201ENST00000261646 MAIP1Q8WWC4 291 aa17.58■□□□□ 0.4
SREBF1-201ENST00000261646 RUBCNQ92622 972 aa17.58■□□□□ 0.4
SREBF1-201ENST00000261646 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.58■□□□□ 0.41e-8■■■□□ 14.8
SREBF1-201ENST00000261646 ISCA1Q9BUE6 129 aa17.58■□□□□ 0.4
SREBF1-201ENST00000261646 IMPG2Q9BZV3 1241 aa17.58■□□□□ 0.4
SREBF1-201ENST00000261646 PNMA2Q9UL42 364 aa17.58■□□□□ 0.4
SREBF1-201ENST00000261646 SPATA31A3Q5VYP0 1347 aa17.58■□□□□ 0.4
SREBF1-201ENST00000261646 SMTNP53814 917 aa17.58■□□□□ 0.4
SREBF1-201ENST00000261646 KCNB1Q14721 858 aa17.58■□□□□ 0.4
SREBF1-201ENST00000261646 TMED2Q15363 201 aa17.58■□□□□ 0.4
SREBF1-201ENST00000261646 COA7Q96BR5 231 aa17.58■□□□□ 0.4
SREBF1-201ENST00000261646 POTEMA6NI47 508 aa17.57■□□□□ 0.4
SREBF1-201ENST00000261646 ECEL1O95672 775 aa17.57■□□□□ 0.4
SREBF1-201ENST00000261646 USP17L8P0C7I0 530 aa17.57■□□□□ 0.4
SREBF1-201ENST00000261646 CYP2D6P10635 497 aa17.57■□□□□ 0.4
SREBF1-201ENST00000261646 PMS2P54278 862 aa17.57■□□□□ 0.4
SREBF1-201ENST00000261646 ERFEQ4G0M1 354 aa17.57■□□□□ 0.4
SREBF1-201ENST00000261646 CDKAL1Q5VV42 579 aa17.57■□□□□ 0.4
SREBF1-201ENST00000261646 PDXDC1Q6P996 788 aa17.57■□□□□ 0.4
SREBF1-201ENST00000261646 TAB3Q8N5C8 712 aaPredicted RBP17.57■□□□□ 0.4
SREBF1-201ENST00000261646 PDCD7Q8N8D1 485 aaKnown RBP17.57■□□□□ 0.4
SREBF1-201ENST00000261646 PIGSQ96S52 555 aa17.57■□□□□ 0.4
SREBF1-201ENST00000261646 TCHPQ9BT92 498 aa17.57■□□□□ 0.4
SREBF1-201ENST00000261646 NCAPD2Q15021 1401 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms