RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 DDX12PQ92771 950 aa17.34■□□□□ 0.37
SLC6A8-201ENST00000253122 CCNL1Q9UK58 526 aaPredicted RBP17.34■□□□□ 0.37
SLC6A8-201ENST00000253122 TOGARAM1Q9Y4F4 1720 aa17.34■□□□□ 0.37
SLC6A8-201ENST00000253122 TBCAO75347 108 aaKnown RBP17.34■□□□□ 0.37
SLC6A8-201ENST00000253122 CALCOCO2Q13137 446 aa17.34■□□□□ 0.37
SLC6A8-201ENST00000253122 CDC37Q16543 378 aaPredicted RBP17.34■□□□□ 0.37
SLC6A8-201ENST00000253122 PPP4R3AQ6IN85 833 aa17.34■□□□□ 0.37
SLC6A8-201ENST00000253122 KCNV1Q6PIU1 500 aa17.34■□□□□ 0.37
SLC6A8-201ENST00000253122 TGFBRAP1Q8WUH2 860 aa17.34■□□□□ 0.37
SLC6A8-201ENST00000253122 MTA3Q9BTC8 594 aa17.34■□□□□ 0.37
SLC6A8-201ENST00000253122 MAGEF1Q9HAY2 307 aa17.34■□□□□ 0.37
SLC6A8-201ENST00000253122 MLXIPLQ9NP71 852 aa17.34■□□□□ 0.37
SLC6A8-201ENST00000253122 ARMCX3Q9UH62 379 aaPredicted RBP17.34■□□□□ 0.37
SLC6A8-201ENST00000253122 CNTNAP5Q8WYK1 1306 aa17.34■□□□□ 0.37
SLC6A8-201ENST00000253122 CCDC169A6NNP5 214 aa17.34■□□□□ 0.37
SLC6A8-201ENST00000253122 EPHB6O15197 1021 aa17.34■□□□□ 0.37
SLC6A8-201ENST00000253122 FGGP02679 453 aa17.34■□□□□ 0.37
SLC6A8-201ENST00000253122 SEC23AQ15436 765 aa17.34■□□□□ 0.37
SLC6A8-201ENST00000253122 OTUD6AQ7L8S5 288 aa17.34■□□□□ 0.37
SLC6A8-201ENST00000253122 SH3GL2Q99962 352 aa17.34■□□□□ 0.37
SLC6A8-201ENST00000253122 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.34■□□□□ 0.377e-7■■■■□ 25.8
SLC6A8-201ENST00000253122 DAAM1Q9Y4D1 1078 aa17.34■□□□□ 0.37
SLC6A8-201ENST00000253122 FSBPO95073 299 aa17.33■□□□□ 0.37
SLC6A8-201ENST00000253122 HIBADHP31937 336 aaKnown RBP17.33■□□□□ 0.37
SLC6A8-201ENST00000253122 CCDC6Q16204 474 aa17.33■□□□□ 0.37
SLC6A8-201ENST00000253122 KLHDC7AQ5VTJ3 777 aa17.33■□□□□ 0.37
SLC6A8-201ENST00000253122 USP17L2Q6R6M4 530 aa17.33■□□□□ 0.37
SLC6A8-201ENST00000253122 GPBP1Q86WP2 473 aa17.33■□□□□ 0.37
SLC6A8-201ENST00000253122 VSIG1Q86XK7 387 aa17.33■□□□□ 0.37
SLC6A8-201ENST00000253122 CCDC105Q8IYK2 499 aa17.33■□□□□ 0.37
SLC6A8-201ENST00000253122 CAVIN3Q969G5 261 aa17.33■□□□□ 0.37
SLC6A8-201ENST00000253122 CCSER1Q9C0I3 900 aa17.33■□□□□ 0.37
SLC6A8-201ENST00000253122 SNX24Q9Y343 169 aa17.33■□□□□ 0.37
SLC6A8-201ENST00000253122 ARFGEF2Q9Y6D5 1785 aa17.33■□□□□ 0.37
SLC6A8-201ENST00000253122 LRP6O75581 1613 aa17.33■□□□□ 0.36
SLC6A8-201ENST00000253122 KCNQ4P56696 695 aa17.33■□□□□ 0.36
SLC6A8-201ENST00000253122 ARHGAP44Q17R89 818 aa17.33■□□□□ 0.36
SLC6A8-201ENST00000253122 SPDL1Q96EA4 605 aa17.33■□□□□ 0.36
SLC6A8-201ENST00000253122 CHMP6Q96FZ7 201 aa17.33■□□□□ 0.36
SLC6A8-201ENST00000253122 PNMA2Q9UL42 364 aa17.33■□□□□ 0.36
SLC6A8-201ENST00000253122 PNPLA7Q6ZV29 1317 aa17.33■□□□□ 0.36
SLC6A8-201ENST00000253122 ZNF263O14978 683 aa17.33■□□□□ 0.36
SLC6A8-201ENST00000253122 IL17AQ16552 155 aa17.33■□□□□ 0.36
SLC6A8-201ENST00000253122 GRIPAP1Q4V328 841 aa17.33■□□□□ 0.36
SLC6A8-201ENST00000253122 CELF4Q9BZC1 486 aaKnown RBP17.33■□□□□ 0.36
SLC6A8-201ENST00000253122 ATP6V0A2Q9Y487 856 aa17.33■□□□□ 0.36
SLC6A8-201ENST00000253122 LAD1O00515 517 aa17.32■□□□□ 0.36
SLC6A8-201ENST00000253122 TTI1O43156 1089 aa17.32■□□□□ 0.36
SLC6A8-201ENST00000253122 TNFAIP3P21580 790 aa17.32■□□□□ 0.36
SLC6A8-201ENST00000253122 NR2F2P24468 414 aa17.32■□□□□ 0.36
SLC6A8-201ENST00000253122 EXOC3L4Q17RC7 722 aa17.32■□□□□ 0.36
SLC6A8-201ENST00000253122 ARMC9Q7Z3E5 817 aa17.32■□□□□ 0.36
SLC6A8-201ENST00000253122 SYCE1Q8N0S2 351 aa17.32■□□□□ 0.36
SLC6A8-201ENST00000253122 MRRFQ96E11 262 aaKnown RBP17.32■□□□□ 0.36
SLC6A8-201ENST00000253122 PBKQ96KB5 322 aa17.32■□□□□ 0.36
SLC6A8-201ENST00000253122 PACSIN1Q9BY11 444 aa17.32■□□□□ 0.36
SLC6A8-201ENST00000253122 PLCB1Q9NQ66 1216 aa17.32■□□□□ 0.36
SLC6A8-201ENST00000253122 DDX20Q9UHI6 824 aaKnown RBP17.32■□□□□ 0.36
SLC6A8-201ENST00000253122 FAM205AQ6ZU69 1335 aa17.32■□□□□ 0.36
SLC6A8-201ENST00000253122 UBR2Q8IWV8 1755 aa17.32■□□□□ 0.36
SLC6A8-201ENST00000253122 XRCC5P13010 732 aaKnown RBP17.32■□□□□ 0.36
SLC6A8-201ENST00000253122 PRLRP16471 622 aa17.32■□□□□ 0.36
SLC6A8-201ENST00000253122 SUSD4Q5VX71 490 aa17.32■□□□□ 0.36
SLC6A8-201ENST00000253122 RUBCNQ92622 972 aa17.32■□□□□ 0.36
SLC6A8-201ENST00000253122 FAM167BQ9BTA0 163 aa17.32■□□□□ 0.36
SLC6A8-201ENST00000253122 CTTNBP2NLQ9P2B4 639 aa17.32■□□□□ 0.36
SLC6A8-201ENST00000253122 PTPN22Q9Y2R2 807 aa17.32■□□□□ 0.36
SLC6A8-201ENST00000253122 FRMPD2Q68DX3 1309 aaPredicted RBP17.32■□□□□ 0.36
SLC6A8-201ENST00000253122 ITGB4P16144 1822 aa17.32■□□□□ 0.36
SLC6A8-201ENST00000253122 LRRC63Q05C16 580 aa17.32■□□□□ 0.36
SLC6A8-201ENST00000253122 PLS1Q14651 629 aa17.32■□□□□ 0.36
SLC6A8-201ENST00000253122 INTS8Q75QN2 995 aaKnown RBP17.32■□□□□ 0.36
SLC6A8-201ENST00000253122 RAPGEF5Q92565 580 aa17.32■□□□□ 0.36
SLC6A8-201ENST00000253122 NAP1L3Q99457 506 aaPredicted RBP17.32■□□□□ 0.36
SLC6A8-201ENST00000253122 PPP1R12CQ9BZL4 782 aa17.32■□□□□ 0.36
SLC6A8-201ENST00000253122 QTRT2Q9H974 415 aaKnown RBP17.32■□□□□ 0.36
SLC6A8-201ENST00000253122 CEP72Q9P209 647 aa17.32■□□□□ 0.36
SLC6A8-201ENST00000253122 ARPP21Q9UBL0 812 aaPredicted RBP17.32■□□□□ 0.36
SLC6A8-201ENST00000253122 NOC2LQ9Y3T9 749 aaKnown RBP17.32■□□□□ 0.36
SLC6A8-201ENST00000253122 BCL9LQ86UU0 1499 aa17.32■□□□□ 0.36
SLC6A8-201ENST00000253122 A0A087X0T9 212 aa17.31■□□□□ 0.36
SLC6A8-201ENST00000253122 GNPATO15228 680 aa17.31■□□□□ 0.36
SLC6A8-201ENST00000253122 FAM228BP0C875 321 aa17.31■□□□□ 0.36
SLC6A8-201ENST00000253122 CCDC38Q502W7 563 aa17.31■□□□□ 0.36
SLC6A8-201ENST00000253122 UNC13DQ70J99 1090 aa17.31■□□□□ 0.36
SLC6A8-201ENST00000253122 SEPT12Q8IYM1 358 aa17.31■□□□□ 0.36
SLC6A8-201ENST00000253122 ZNF512BQ96KM6 892 aaPredicted RBP17.31■□□□□ 0.36
SLC6A8-201ENST00000253122 FAM114A2Q9NRY5 505 aa17.31■□□□□ 0.36
SLC6A8-201ENST00000253122 PCDHA6Q9UN73 950 aa17.31■□□□□ 0.36
SLC6A8-201ENST00000253122 KIAA1024Q9UPX6 916 aa17.31■□□□□ 0.36
SLC6A8-201ENST00000253122 PCDHA8Q9Y5H6 950 aa17.31■□□□□ 0.36
SLC6A8-201ENST00000253122 TACC3Q9Y6A5 838 aa17.31■□□□□ 0.36
SLC6A8-201ENST00000253122 NWD2Q9ULI1 1742 aa17.31■□□□□ 0.36
SLC6A8-201ENST00000253122 DOT1LQ8TEK3 1739 aa17.31■□□□□ 0.36
SLC6A8-201ENST00000253122 LDHBP07195 334 aaKnown RBP17.31■□□□□ 0.36
SLC6A8-201ENST00000253122 PAX7P23759 505 aa17.31■□□□□ 0.36
SLC6A8-201ENST00000253122 SCTRP47872 440 aa17.31■□□□□ 0.36
SLC6A8-201ENST00000253122 LRRC14Q15048 493 aa17.31■□□□□ 0.36
SLC6A8-201ENST00000253122 INTS5Q6P9B9 1019 aaKnown RBP17.31■□□□□ 0.36
SLC6A8-201ENST00000253122 TAOK1Q7L7X3 1001 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms