RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 TMOD1P28289 359 aa11.98□□□□□ -0.49
CCDC170-201ENST00000239374 SLC16A2P36021 539 aa11.98□□□□□ -0.49
CCDC170-201ENST00000239374 RASSF2P50749 326 aa11.98□□□□□ -0.49
CCDC170-201ENST00000239374 HSPA2P54652 639 aa11.98□□□□□ -0.49
CCDC170-201ENST00000239374 MUM1Q2TAK8 710 aa11.98□□□□□ -0.49
CCDC170-201ENST00000239374 TMEM139Q8IV31 216 aa11.98□□□□□ -0.49
CCDC170-201ENST00000239374 FAM186BQ8IYM0 893 aa11.98□□□□□ -0.49
CCDC170-201ENST00000239374 SYNCQ9H7C4 482 aa11.98□□□□□ -0.49
CCDC170-201ENST00000239374 SLC24A3Q9HC58 644 aa11.98□□□□□ -0.49
CCDC170-201ENST00000239374 OVOS2A0A0G2JMS6 1433 aa11.98□□□□□ -0.49
CCDC170-201ENST00000239374 PRPF6O94906 941 aaKnown RBP11.98□□□□□ -0.49
CCDC170-201ENST00000239374 ERFEQ4G0M1 354 aa11.98□□□□□ -0.49
CCDC170-201ENST00000239374 PROM2Q8N271 834 aa11.98□□□□□ -0.49
CCDC170-201ENST00000239374 EHD4Q9H223 541 aa11.98□□□□□ -0.49
CCDC170-201ENST00000239374 FAM217BQ9NTX9 383 aaPredicted RBP11.98□□□□□ -0.49
CCDC170-201ENST00000239374 HAUS2Q9NVX0 235 aa11.98□□□□□ -0.49
CCDC170-201ENST00000239374 TBK1Q9UHD2 729 aa11.98□□□□□ -0.49
CCDC170-201ENST00000239374 GGA1Q9UJY5 639 aa11.98□□□□□ -0.49
CCDC170-201ENST00000239374 CLTCQ00610 1675 aaKnown RBP11.98□□□□□ -0.49
CCDC170-201ENST00000239374 BAZ2BQ9UIF8 2168 aaKnown RBP11.97□□□□□ -0.49
CCDC170-201ENST00000239374 TULP2O00295 520 aa11.97□□□□□ -0.49
CCDC170-201ENST00000239374 SART1O43290 800 aaKnown RBP11.97□□□□□ -0.49
CCDC170-201ENST00000239374 HDLBPQ00341 1268 aaKnown RBP11.97□□□□□ -0.49
CCDC170-201ENST00000239374 MYO1EQ12965 1108 aa11.97□□□□□ -0.49
CCDC170-201ENST00000239374 NBPF9Q3BBW0 867 aa11.97□□□□□ -0.49
CCDC170-201ENST00000239374 SLFN12Q8IYM2 578 aa11.97□□□□□ -0.49
CCDC170-201ENST00000239374 CNBD1Q8NA66 436 aa11.97□□□□□ -0.49
CCDC170-201ENST00000239374 GDAP1Q8TB36 358 aa11.97□□□□□ -0.49
CCDC170-201ENST00000239374 ZNF512BQ96KM6 892 aaPredicted RBP11.97□□□□□ -0.49
CCDC170-201ENST00000239374 TMEM260Q9NX78 707 aa11.97□□□□□ -0.49
CCDC170-201ENST00000239374 PCDHA6Q9UN73 950 aa11.97□□□□□ -0.49
CCDC170-201ENST00000239374 PCDHA8Q9Y5H6 950 aa11.97□□□□□ -0.49
CCDC170-201ENST00000239374 CASP7P55210 303 aa11.97□□□□□ -0.49
CCDC170-201ENST00000239374 SNX1Q13596 522 aa11.97□□□□□ -0.49
CCDC170-201ENST00000239374 DDX42Q86XP3 938 aaKnown RBP eCLIP11.97□□□□□ -0.49
CCDC170-201ENST00000239374 PPM1KQ8N3J5 372 aa11.97□□□□□ -0.49
CCDC170-201ENST00000239374 VCXQ9H320 206 aa11.97□□□□□ -0.49
CCDC170-201ENST00000239374 BARHL2Q9NY43 387 aa11.97□□□□□ -0.49
CCDC170-201ENST00000239374 NOC2LQ9Y3T9 749 aaKnown RBP11.97□□□□□ -0.49
CCDC170-201ENST00000239374 LOC102724428A0A0B4J2F2 783 aa11.97□□□□□ -0.49
CCDC170-201ENST00000239374 SIK1P57059 783 aa11.97□□□□□ -0.49
CCDC170-201ENST00000239374 COASYQ13057 564 aa11.97□□□□□ -0.49
CCDC170-201ENST00000239374 PPP4R3AQ6IN85 833 aa11.97□□□□□ -0.49
CCDC170-201ENST00000239374 HDAC7Q8WUI4 952 aa11.97□□□□□ -0.49
CCDC170-201ENST00000239374 CHMP6Q96FZ7 201 aa11.97□□□□□ -0.49
CCDC170-201ENST00000239374 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.97□□□□□ -0.49
CCDC170-201ENST00000239374 DNAJC17Q9NVM6 304 aaKnown RBP11.97□□□□□ -0.49
CCDC170-201ENST00000239374 PLEKHG2Q9H7P9 1386 aa11.97□□□□□ -0.49
CCDC170-201ENST00000239374 PHF20L1A8MW92 1017 aa11.97□□□□□ -0.49
CCDC170-201ENST00000239374 RAD51CO43502 376 aa11.97□□□□□ -0.49
CCDC170-201ENST00000239374 EARS2Q5JPH6 523 aaKnown RBP11.97□□□□□ -0.49
CCDC170-201ENST00000239374 PLAGL2Q9UPG8 496 aa11.97□□□□□ -0.49
CCDC170-201ENST00000239374 ECM2O94769 699 aaPredicted RBP11.96□□□□□ -0.49
CCDC170-201ENST00000239374 ACSL3O95573 720 aa11.96□□□□□ -0.49
CCDC170-201ENST00000239374 ABL1P00519 1130 aa11.96□□□□□ -0.49
CCDC170-201ENST00000239374 TCP10Q12799 353 aa11.96□□□□□ -0.49
CCDC170-201ENST00000239374 ZNF211Q13398 564 aaPredicted RBP11.96□□□□□ -0.49
CCDC170-201ENST00000239374 PTGISQ16647 500 aa11.96□□□□□ -0.49
CCDC170-201ENST00000239374 C6orf118Q5T5N4 469 aa11.96□□□□□ -0.49
CCDC170-201ENST00000239374 ANKRD20A3Q5VUR7 823 aa11.96□□□□□ -0.49
CCDC170-201ENST00000239374 RAD54LQ92698 747 aa11.96□□□□□ -0.49
CCDC170-201ENST00000239374 RABGAP1Q9Y3P9 1069 aa11.96□□□□□ -0.49
CCDC170-201ENST00000239374 FAM237AA0A1B0GTK4 181 aa11.96□□□□□ -0.49
CCDC170-201ENST00000239374 E9PMD0 336 aa11.96□□□□□ -0.49
CCDC170-201ENST00000239374 IFNB1P01574 187 aa11.96□□□□□ -0.49
CCDC170-201ENST00000239374 ATP2A2P16615 1042 aaKnown RBP11.96□□□□□ -0.49
CCDC170-201ENST00000239374 SEPT2Q15019 361 aa11.96□□□□□ -0.49
CCDC170-201ENST00000239374 CEP128Q6ZU80 1094 aa11.96□□□□□ -0.49
CCDC170-201ENST00000239374 IMPG2Q9BZV3 1241 aa11.96□□□□□ -0.49
CCDC170-201ENST00000239374 CD248Q9HCU0 757 aa11.96□□□□□ -0.49
CCDC170-201ENST00000239374 SSU72P8A0A1W2PR75 194 aa11.96□□□□□ -0.49
CCDC170-201ENST00000239374 TROAPQ12815 778 aa11.96□□□□□ -0.49
CCDC170-201ENST00000239374 SEMA3FQ13275 785 aa11.96□□□□□ -0.49
CCDC170-201ENST00000239374 CYFIP2Q96F07 1278 aa11.96□□□□□ -0.49
CCDC170-201ENST00000239374 EDEM3Q9BZQ6 932 aa11.96□□□□□ -0.49
CCDC170-201ENST00000239374 TRIM6Q9C030 488 aaPredicted RBP11.96□□□□□ -0.49
CCDC170-201ENST00000239374 MLXIPLQ9NP71 852 aa11.96□□□□□ -0.49
CCDC170-201ENST00000239374 SPATS2LQ9NUQ6 558 aaKnown RBP11.96□□□□□ -0.49
CCDC170-201ENST00000239374 STK24Q9Y6E0 443 aa11.96□□□□□ -0.49
CCDC170-201ENST00000239374 ATF2P15336 505 aa11.96□□□□□ -0.5
CCDC170-201ENST00000239374 PSMC2P35998 433 aaKnown RBP11.96□□□□□ -0.5
CCDC170-201ENST00000239374 CCDC62Q6P9F0 684 aa11.96□□□□□ -0.5
CCDC170-201ENST00000239374 CNTNAP5Q8WYK1 1306 aa11.96□□□□□ -0.5
CCDC170-201ENST00000239374 ERGIC2Q96RQ1 377 aa11.96□□□□□ -0.5
CCDC170-201ENST00000239374 NOP53Q9NZM5 478 aaKnown RBP11.96□□□□□ -0.5
CCDC170-201ENST00000239374 SLIT1O75093 1534 aa11.96□□□□□ -0.5
CCDC170-201ENST00000239374 TMEM94Q12767 1356 aa11.96□□□□□ -0.5
CCDC170-201ENST00000239374 FAM107AO95990 144 aa11.95□□□□□ -0.5
CCDC170-201ENST00000239374 KLRC1P26715 233 aa11.95□□□□□ -0.5
CCDC170-201ENST00000239374 ADCY2Q08462 1091 aa11.95□□□□□ -0.5
CCDC170-201ENST00000239374 SLC18A3Q16572 532 aa11.95□□□□□ -0.5
CCDC170-201ENST00000239374 KCTD1Q719H9 257 aa11.95□□□□□ -0.5
CCDC170-201ENST00000239374 TCHPQ9BT92 498 aa11.95□□□□□ -0.5
CCDC170-201ENST00000239374 GOLPH3Q9H4A6 298 aa11.95□□□□□ -0.5
CCDC170-201ENST00000239374 AZI2Q9H6S1 392 aa11.95□□□□□ -0.5
CCDC170-201ENST00000239374 PXDNQ92626 1479 aa11.95□□□□□ -0.5
CCDC170-201ENST00000239374 LUC7L3O95232 432 aaKnown RBP11.95□□□□□ -0.5
CCDC170-201ENST00000239374 TDP2O95551 362 aa11.95□□□□□ -0.5
CCDC170-201ENST00000239374 MYL7Q01449 175 aa11.95□□□□□ -0.5
CCDC170-201ENST00000239374 GRM4Q14833 912 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms