RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 TOP1P11387 765 aaKnown RBP6.62□□□□□ -1.35
AFP-201ENST00000226359 CNGA1P29973 690 aa6.62□□□□□ -1.35
AFP-201ENST00000226359 OAZ1P54368 228 aa6.62□□□□□ -1.35
AFP-201ENST00000226359 HAND2P61296 217 aa6.62□□□□□ -1.35
AFP-201ENST00000226359 TKFCQ3LXA3 575 aa6.62□□□□□ -1.35
AFP-201ENST00000226359 VPS53Q5VIR6 699 aa6.62□□□□□ -1.35
AFP-201ENST00000226359 OLFML2BQ68BL8 750 aa6.62□□□□□ -1.35
AFP-201ENST00000226359 RCSD1Q6JBY9 416 aa6.62□□□□□ -1.35
AFP-201ENST00000226359 TMEM214Q6NUQ4 689 aaKnown RBP6.62□□□□□ -1.35
AFP-201ENST00000226359 ZNF589Q86UQ0 364 aaPredicted RBP6.62□□□□□ -1.35
AFP-201ENST00000226359 TRIB2Q92519 343 aa6.62□□□□□ -1.35
AFP-201ENST00000226359 MKL1Q969V6 931 aa6.62□□□□□ -1.35
AFP-201ENST00000226359 DDX11Q96FC9 970 aa6.62□□□□□ -1.35
AFP-201ENST00000226359 GMCL1Q96IK5 515 aa6.62□□□□□ -1.35
AFP-201ENST00000226359 UBAC1Q9BSL1 405 aa6.62□□□□□ -1.35
AFP-201ENST00000226359 KRT23Q9C075 422 aa6.62□□□□□ -1.35
AFP-201ENST00000226359 PAK6Q9NQU5 681 aaPredicted RBP6.62□□□□□ -1.35
AFP-201ENST00000226359 CNPY2Q9Y2B0 182 aa6.62□□□□□ -1.35
AFP-201ENST00000226359 ERICH2A1L162 156 aa6.61□□□□□ -1.35
AFP-201ENST00000226359 H3BM21 787 aa6.61□□□□□ -1.35
AFP-201ENST00000226359 OPLAHO14841 1288 aa6.61□□□□□ -1.35
AFP-201ENST00000226359 FGRP09769 529 aa6.61□□□□□ -1.35
AFP-201ENST00000226359 MZF1P28698 734 aaPredicted RBP6.61□□□□□ -1.35
AFP-201ENST00000226359 PHKA2P46019 1235 aa6.61□□□□□ -1.35
AFP-201ENST00000226359 PLA2G4AP47712 749 aa6.61□□□□□ -1.35
AFP-201ENST00000226359 TMEM132BQ14DG7 1078 aa6.61□□□□□ -1.35
AFP-201ENST00000226359 SART3Q15020 963 aaKnown RBP6.61□□□□□ -1.35
AFP-201ENST00000226359 ZNF746Q6NUN9 644 aaPredicted RBP6.61□□□□□ -1.35
AFP-201ENST00000226359 NOL8Q76FK4 1167 aaKnown RBP6.61□□□□□ -1.35
AFP-201ENST00000226359 PRICKLE2Q7Z3G6 844 aa6.61□□□□□ -1.35
AFP-201ENST00000226359 RALYLQ86SE5 291 aaKnown RBP6.61□□□□□ -1.35
AFP-201ENST00000226359 ETFBKMTQ8IXQ9 262 aa6.61□□□□□ -1.35
AFP-201ENST00000226359 CPXCR1Q8N123 301 aa6.61□□□□□ -1.35
AFP-201ENST00000226359 CHST13Q8NET6 341 aa6.61□□□□□ -1.35
AFP-201ENST00000226359 RNF217Q8TC41 542 aa6.61□□□□□ -1.35
AFP-201ENST00000226359 MPHOSPH6Q99547 160 aaKnown RBP6.61□□□□□ -1.35
AFP-201ENST00000226359 NUP88Q99567 741 aaPredicted RBP6.61□□□□□ -1.35
AFP-201ENST00000226359 GRIP2Q9C0E4 1043 aa6.61□□□□□ -1.35
AFP-201ENST00000226359 KAT14Q9H8E8 782 aa6.61□□□□□ -1.35
AFP-201ENST00000226359 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.61□□□□□ -1.35
AFP-201ENST00000226359 FBXO28Q9NVF7 368 aa6.61□□□□□ -1.35
AFP-201ENST00000226359 NRBP1Q9UHY1 535 aa6.61□□□□□ -1.35
AFP-201ENST00000226359 MRPL42Q9Y6G3 142 aaKnown RBP6.61□□□□□ -1.35
AFP-201ENST00000226359 A6NHS1 94 aa6.6□□□□□ -1.35
AFP-201ENST00000226359 KBTBD13C9JR72 458 aa6.6□□□□□ -1.35
AFP-201ENST00000226359 SMIM22K7EJ46 135 aa6.6□□□□□ -1.35
AFP-201ENST00000226359 PEX10O60683 326 aa6.6□□□□□ -1.35
AFP-201ENST00000226359 NOS2P35228 1153 aa6.6□□□□□ -1.35
AFP-201ENST00000226359 C4orf17Q53FE4 359 aa6.6□□□□□ -1.35
AFP-201ENST00000226359 KIAA1755Q5JYT7 1200 aa6.6□□□□□ -1.35
AFP-201ENST00000226359 GPATCH4Q5T3I0 446 aaKnown RBP6.6□□□□□ -1.35
AFP-201ENST00000226359 SIAH1Q8IUQ4 282 aa6.6□□□□□ -1.35
AFP-201ENST00000226359 ANKRD35Q8N283 1001 aa6.6□□□□□ -1.35
AFP-201ENST00000226359 RHBDD1Q8TEB9 315 aa6.6□□□□□ -1.35
AFP-201ENST00000226359 USP6NLQ92738 828 aa6.6□□□□□ -1.35
AFP-201ENST00000226359 ZFP42Q96MM3 310 aa6.6□□□□□ -1.35
AFP-201ENST00000226359 TTC14Q96N46 770 aa6.6□□□□□ -1.35
AFP-201ENST00000226359 C11orf49Q9H6J7 331 aa6.6□□□□□ -1.35
AFP-201ENST00000226359 ACAD9Q9H845 621 aa6.6□□□□□ -1.35
AFP-201ENST00000226359 TCP11L1Q9NUJ3 509 aa6.6□□□□□ -1.35
AFP-201ENST00000226359 HCN4Q9Y3Q4 1203 aa6.6□□□□□ -1.35
AFP-201ENST00000226359 BAZ2AQ9UIF9 1905 aaKnown RBP6.6□□□□□ -1.35
AFP-201ENST00000226359 SERTM1A2A2V5 107 aa6.6□□□□□ -1.35
AFP-201ENST00000226359 ATP2A1O14983 1001 aa6.6□□□□□ -1.35
AFP-201ENST00000226359 PLA2G6O60733 806 aa6.6□□□□□ -1.35
AFP-201ENST00000226359 STK10O94804 968 aaKnown RBP6.6□□□□□ -1.35
AFP-201ENST00000226359 PDGFAP04085 211 aa6.6□□□□□ -1.35
AFP-201ENST00000226359 MCCP23508 829 aa6.6□□□□□ -1.35
AFP-201ENST00000226359 GPC1P35052 558 aa6.6□□□□□ -1.35
AFP-201ENST00000226359 TXLNAP40222 546 aa6.6□□□□□ -1.35
AFP-201ENST00000226359 RNF144AP50876 292 aaPredicted RBP6.6□□□□□ -1.35
AFP-201ENST00000226359 CACNB2Q08289 660 aaPredicted RBP6.6□□□□□ -1.35
AFP-201ENST00000226359 MAP3K21Q5TCX8 1036 aa6.6□□□□□ -1.35
AFP-201ENST00000226359 SYDE2Q5VT97 1194 aa6.6□□□□□ -1.35
AFP-201ENST00000226359 MSL3Q8N5Y2 521 aaKnown RBP6.6□□□□□ -1.35
AFP-201ENST00000226359 ARRDC4Q8NCT1 418 aa6.6□□□□□ -1.35
AFP-201ENST00000226359 SHISA4Q96DD7 197 aa6.6□□□□□ -1.35
AFP-201ENST00000226359 SPC25Q9HBM1 224 aa6.6□□□□□ -1.35
AFP-201ENST00000226359 SLC38A10Q9HBR0 1119 aa6.6□□□□□ -1.35
AFP-201ENST00000226359 DDX20Q9UHI6 824 aaKnown RBP6.6□□□□□ -1.35
AFP-201ENST00000226359 GGT7Q9UJ14 662 aa6.6□□□□□ -1.35
AFP-201ENST00000226359 CCPG1Q9ULG6 757 aa6.6□□□□□ -1.35
AFP-201ENST00000226359 DIS3Q9Y2L1 958 aaKnown RBP6.6□□□□□ -1.35
AFP-201ENST00000226359 PFASO15067 1338 aa6.6□□□□□ -1.35
AFP-201ENST00000226359 ZSWIM8A7E2V4 1837 aa6.59□□□□□ -1.35
AFP-201ENST00000226359 MYH8P13535 1937 aa6.59□□□□□ -1.35
AFP-201ENST00000226359 FIGNL2A6NMB9 653 aa6.59□□□□□ -1.35
AFP-201ENST00000226359 B4DLN1 442 aa6.59□□□□□ -1.35
AFP-201ENST00000226359 EIF1AYO14602 144 aaKnown RBP6.59□□□□□ -1.35
AFP-201ENST00000226359 DHX16O60231 1041 aaKnown RBP6.59□□□□□ -1.35
AFP-201ENST00000226359 RARBP10826 455 aa6.59□□□□□ -1.35
AFP-201ENST00000226359 MRPL12P52815 198 aaKnown RBP6.59□□□□□ -1.35
AFP-201ENST00000226359 CCL14Q16627 93 aa6.59□□□□□ -1.35
AFP-201ENST00000226359 PTPROQ16827 1216 aa6.59□□□□□ -1.35
AFP-201ENST00000226359 MEI1Q5TIA1 1274 aa6.59□□□□□ -1.35
AFP-201ENST00000226359 CCDC174Q6PII3 467 aa6.59□□□□□ -1.35
AFP-201ENST00000226359 KCTD1Q719H9 257 aa6.59□□□□□ -1.35
AFP-201ENST00000226359 TBC1D10CQ8IV04 446 aa6.59□□□□□ -1.35
AFP-201ENST00000226359 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.59□□□□□ -1.351e-47■■■■□ 26.7
AFP-201ENST00000226359 NIFKQ9BYG3 293 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms