RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Yy1Q00899 414 aa16.78■□□□□ 0.28
Upf1-202ENSMUST00000215817 Ric8aQ3TIR3 530 aa16.78■□□□□ 0.28
Upf1-202ENSMUST00000215817 Vwa3aQ3UVV9 1148 aa16.78■□□□□ 0.28
Upf1-202ENSMUST00000215817 GopcQ8BH60 463 aa16.78■□□□□ 0.28
Upf1-202ENSMUST00000215817 Med24Q99K74 987 aa16.78■□□□□ 0.28
Upf1-202ENSMUST00000215817 Cbx6Q9DBY5 414 aa16.78■□□□□ 0.28
Upf1-202ENSMUST00000215817 Nfe2l3Q9WTM4 660 aa16.78■□□□□ 0.28
Upf1-202ENSMUST00000215817 Extl3Q9WVL6 918 aa16.78■□□□□ 0.28
Upf1-202ENSMUST00000215817 Epha7Q61772 998 aa16.77■□□□□ 0.28
Upf1-202ENSMUST00000215817 Rusc1Q8BG26 893 aa16.77■□□□□ 0.28
Upf1-202ENSMUST00000215817 BcamQ9R069 622 aa16.77■□□□□ 0.28
Upf1-202ENSMUST00000215817 Abca15E9PWH4 1668 aa16.77■□□□□ 0.28
Upf1-202ENSMUST00000215817 Mboat4P0C7A3 435 aa16.77■□□□□ 0.28
Upf1-202ENSMUST00000215817 Lrch1P62046 709 aa16.77■□□□□ 0.28
Upf1-202ENSMUST00000215817 Tshz2Q68FE9 1030 aa16.77■□□□□ 0.28
Upf1-202ENSMUST00000215817 Rd3Q8BRE0 195 aa16.77■□□□□ 0.28
Upf1-202ENSMUST00000215817 Bhmt2Q91WS4 363 aa16.77■□□□□ 0.28
Upf1-202ENSMUST00000215817 Josd2Q9CR30 188 aa16.77■□□□□ 0.28
Upf1-202ENSMUST00000215817 Calb1P12658 261 aa16.77■□□□□ 0.27
Upf1-202ENSMUST00000215817 YwhabQ9CQV8 246 aaKnown RBP16.77■□□□□ 0.27
Upf1-202ENSMUST00000215817 Polr3eQ9CZT4 710 aa16.77■□□□□ 0.27
Upf1-202ENSMUST00000215817 Gm5134E9QAB5 671 aa16.77■□□□□ 0.27
Upf1-202ENSMUST00000215817 Epha2Q03145 977 aa16.77■□□□□ 0.27
Upf1-202ENSMUST00000215817 Mysm1Q69Z66 819 aa16.77■□□□□ 0.27
Upf1-202ENSMUST00000215817 Prpf40bQ80W14 870 aa16.77■□□□□ 0.27
Upf1-202ENSMUST00000215817 Fbxl16A2RT62 479 aa16.76■□□□□ 0.27
Upf1-202ENSMUST00000215817 Q3UK37 420 aa16.76■□□□□ 0.27
Upf1-202ENSMUST00000215817 Tcaf3Q6QR59 914 aa16.76■□□□□ 0.27
Upf1-202ENSMUST00000215817 Pcdha7Q91Y13 937 aa16.76■□□□□ 0.27
Upf1-202ENSMUST00000215817 Apobec3Q99J72 440 aaKnown RBP16.76■□□□□ 0.27
Upf1-202ENSMUST00000215817 Dusp10Q9ESS0 483 aa16.76■□□□□ 0.27
Upf1-202ENSMUST00000215817 AoahO35298 574 aa16.76■□□□□ 0.27
Upf1-202ENSMUST00000215817 Capza3P70190 299 aa16.76■□□□□ 0.27
Upf1-202ENSMUST00000215817 Lilrb3P97484 841 aa16.76■□□□□ 0.27
Upf1-202ENSMUST00000215817 Lrrc24Q8BHA1 521 aa16.76■□□□□ 0.27
Upf1-202ENSMUST00000215817 TxlnbQ8VBT1 685 aa16.76■□□□□ 0.27
Upf1-202ENSMUST00000215817 Doc2gQ9ESN1 387 aa16.76■□□□□ 0.27
Upf1-202ENSMUST00000215817 Large1Q9Z1M7 756 aa16.76■□□□□ 0.27
Upf1-202ENSMUST00000215817 Vmn2r78K7N6U5 853 aa16.76■□□□□ 0.27
Upf1-202ENSMUST00000215817 Tnnc2P20801 160 aa16.76■□□□□ 0.27
Upf1-202ENSMUST00000215817 Tbc1d10bQ8BHL3 798 aa16.76■□□□□ 0.27
Upf1-202ENSMUST00000215817 Cog5Q8C0L8 829 aa16.76■□□□□ 0.27
Upf1-202ENSMUST00000215817 DonsonQ9QXP4 560 aa16.76■□□□□ 0.27
Upf1-202ENSMUST00000215817 Gm3415J3QMS8 315 aa16.75■□□□□ 0.27
Upf1-202ENSMUST00000215817 Muc1Q02496 630 aa16.75■□□□□ 0.27
Upf1-202ENSMUST00000215817 Mindy4Q3UQI9 744 aa16.75■□□□□ 0.27
Upf1-202ENSMUST00000215817 Rbm12b2Q66JV4 834 aaKnown RBP16.75■□□□□ 0.27
Upf1-202ENSMUST00000215817 Gm3404Q9D506 307 aa16.75■□□□□ 0.27
Upf1-202ENSMUST00000215817 Ulk4Q3V129 1303 aa16.75■□□□□ 0.27
Upf1-202ENSMUST00000215817 Pramel3A2AHA7 463 aa16.75■□□□□ 0.27
Upf1-202ENSMUST00000215817 Gm7903A2AWL1 463 aa16.75■□□□□ 0.27
Upf1-202ENSMUST00000215817 AV320801A2AWL3 467 aa16.75■□□□□ 0.27
Upf1-202ENSMUST00000215817 Gm15023L7MUB4 467 aa16.75■□□□□ 0.27
Upf1-202ENSMUST00000215817 Antxr1Q9CZ52 562 aa16.75■□□□□ 0.27
Upf1-202ENSMUST00000215817 Ubiad1Q9DC60 336 aa16.75■□□□□ 0.27
Upf1-202ENSMUST00000215817 Psmc4P54775 418 aa16.75■□□□□ 0.27
Upf1-202ENSMUST00000215817 Ccdc33Q3ULW6 985 aa16.75■□□□□ 0.27
Upf1-202ENSMUST00000215817 Ndfip2Q91ZP6 311 aa16.75■□□□□ 0.27
Upf1-202ENSMUST00000215817 Mms19Q9D071 1031 aa16.75■□□□□ 0.27
Upf1-202ENSMUST00000215817 Usp20Q8C6M1 916 aa16.75■□□□□ 0.27
Upf1-202ENSMUST00000215817 Hebp1Q9R257 190 aa16.75■□□□□ 0.27
Upf1-202ENSMUST00000215817 Acad12D3Z7X0 555 aa16.74■□□□□ 0.27
Upf1-202ENSMUST00000215817 Vmn2r87E9PZX4 848 aa16.74■□□□□ 0.27
Upf1-202ENSMUST00000215817 Slc9a2Q3ZAS0 814 aa16.74■□□□□ 0.27
Upf1-202ENSMUST00000215817 Inpp5fQ8CDA1 1132 aa16.74■□□□□ 0.27
Upf1-202ENSMUST00000215817 Mfap3Q922T2 349 aa16.74■□□□□ 0.27
Upf1-202ENSMUST00000215817 JcadQ5DTX6 1320 aa16.74■□□□□ 0.27
Upf1-202ENSMUST00000215817 Pnpla6Q3TRM4 1355 aa16.74■□□□□ 0.27
Upf1-202ENSMUST00000215817 Cul4bA2A432 970 aaKnown RBP16.74■□□□□ 0.27
Upf1-202ENSMUST00000215817 Magea8O89012 320 aa16.74■□□□□ 0.27
Upf1-202ENSMUST00000215817 Tsta3P23591 321 aa16.74■□□□□ 0.27
Upf1-202ENSMUST00000215817 Kcnma1Q08460 1209 aa16.74■□□□□ 0.27
Upf1-202ENSMUST00000215817 DpydQ8CHR6 1025 aa16.74■□□□□ 0.27
Upf1-202ENSMUST00000215817 Kcnk13Q8R1P5 405 aa16.74■□□□□ 0.27
Upf1-202ENSMUST00000215817 Polr3fQ921X6 316 aa16.74■□□□□ 0.27
Upf1-202ENSMUST00000215817 Asic2Q925H0 512 aa16.74■□□□□ 0.27
Upf1-202ENSMUST00000215817 Gm5114W4VSN8 858 aa16.74■□□□□ 0.27
Upf1-202ENSMUST00000215817 Igf2rQ07113 2483 aaKnown RBP16.74■□□□□ 0.27
Upf1-202ENSMUST00000215817 Apba3O88888 571 aa16.74■□□□□ 0.27
Upf1-202ENSMUST00000215817 RarbP22605 482 aa16.74■□□□□ 0.27
Upf1-202ENSMUST00000215817 Specc1lQ2KN98 1118 aaKnown RBP16.74■□□□□ 0.27
Upf1-202ENSMUST00000215817 Hace1Q3U0D9 909 aa16.74■□□□□ 0.27
Upf1-202ENSMUST00000215817 Palb2Q3U0P1 1104 aa16.74■□□□□ 0.27
Upf1-202ENSMUST00000215817 Lrrc14bQ3UJB3 510 aa16.74■□□□□ 0.27
Upf1-202ENSMUST00000215817 Gm5935Q497S0 212 aa16.74■□□□□ 0.27
Upf1-202ENSMUST00000215817 Zfp943Q6NZP4 507 aa16.74■□□□□ 0.27
Upf1-202ENSMUST00000215817 RubcnQ80U62 956 aa16.74■□□□□ 0.27
Upf1-202ENSMUST00000215817 Acsl3Q9CZW4 720 aaKnown RBP16.74■□□□□ 0.27
Upf1-202ENSMUST00000215817 Noc2lQ9WV70 747 aaKnown RBP16.74■□□□□ 0.27
Upf1-202ENSMUST00000215817 Rgs12Q8CGE9 1381 aa16.73■□□□□ 0.27
Upf1-202ENSMUST00000215817 Ece1Q4PZA2 769 aa16.73■□□□□ 0.27
Upf1-202ENSMUST00000215817 CbarpQ66L44 698 aa16.73■□□□□ 0.27
Upf1-202ENSMUST00000215817 C2cd5Q7TPS5 1016 aaKnown RBP16.73■□□□□ 0.27
Upf1-202ENSMUST00000215817 Cct8l1Q80YT3 562 aa16.73■□□□□ 0.27
Upf1-202ENSMUST00000215817 Trerf1Q8BXJ2 1205 aa16.73■□□□□ 0.27
Upf1-202ENSMUST00000215817 Taco1Q8K0Z7 294 aaKnown RBP16.73■□□□□ 0.27
Upf1-202ENSMUST00000215817 Ccdc14Q8K2J4 934 aa16.73■□□□□ 0.27
Upf1-202ENSMUST00000215817 Mis18aQ9CZJ6 204 aa16.73■□□□□ 0.27
Upf1-202ENSMUST00000215817 Irx4Q9QY61 515 aa16.73■□□□□ 0.27
Upf1-202ENSMUST00000215817 ByslO54825 436 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 16.7 ms